FFCP PHASE1:Hg19::chr22:36018569..36018583,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4151 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6915 | |||
|TSSclassifier=weak | |||
|UniProt=F2Z337 | |||
|association_with_transcript=0bp_to_ENST00000419229_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_2_at_MB_5end | |||
|id=chr22:36018569..36018583,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.00e-15;29!UBERON:0006603;1.92e-08;65!UBERON:0006595;2.40e-07;86 | |||
|ontology_enrichment_disease=DOID:305!3.83e-22!106;DOID:0050687!1.40e-15!143;DOID:162!1.94e-07!235;DOID:14566!6.75e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:305;7.09e-09;106!DOID:5093;7.55e-09;4!DOID:1612;7.55e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.04e-24,106;DOID:0050687,4.24e-15,143;DOID:5093,7.57e-09,4;DOID:1612,7.57e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0004921!6.36e-15!129;UBERON:0004185!6.36e-15!129;UBERON:0001007!3.84e-13!155;UBERON:0001555!3.84e-13!155;UBERON:0007026!3.84e-13!155;UBERON:0000077!8.51e-13!130;UBERON:0004119!3.33e-12!169;UBERON:0000925!3.33e-12!169;UBERON:0006595!3.33e-12!169;UBERON:0007023!8.86e-11!115;UBERON:0001557!6.18e-10!19;UBERON:0001041!1.78e-09!98;UBERON:0001737!2.25e-09!9;UBERON:0000160!6.83e-09!27;UBERON:0000062!7.51e-09!511;UBERON:0001004!1.31e-08!72;UBERON:0000072!1.82e-08!46;UBERON:0000065!8.45e-08!53;UBERON:0005631!1.30e-07!14;UBERON:0000158!1.30e-07!14;UBERON:0008947!1.37e-07!38;UBERON:0003258!1.37e-07!38;UBERON:0005409!2.99e-07!35;UBERON:0000468!8.29e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.74e-14;9!UBERON:0001557;5.74e-14;9!UBERON:0000072;1.10e-08;37!UBERON:0005631;8.33e-08;10!UBERON:0000158;8.33e-08;10!UBERON:0004151;6.27e-07;3!UBERON:0003978;6.71e-07;3!UBERON:0000946;6.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.19e-14,9;UBERON:0004921,1.09e-12,118;UBERON:0001007,4.21e-12,145;UBERON:0001555,4.21e-12,145;UBERON:0007026,4.21e-12,145;UBERON:0001557,2.80e-11,19;UBERON:0008947,1.05e-10,38;UBERON:0003258,1.05e-10,38;UBERON:0004119,1.31e-10,160;UBERON:0000925,1.31e-10,160;UBERON:0006595,1.31e-10,160;UBERON:0000072,1.57e-10,47;UBERON:0001004,1.17e-09,74;UBERON:0000065,2.04e-09,54;UBERON:0001041,1.03e-08,87;UBERON:0007023,2.57e-07,114;UBERON:0001048,3.21e-07,160;UBERON:0004151,6.53e-07,3;UBERON:0003978,6.92e-07,3;UBERON:0009751,6.92e-07,3;UBERON:0000946,6.92e-07,3;UBERON:0002523,6.92e-07,3;UBERON:0005983,6.92e-07,3;UBERON:0002165,6.92e-07,3;UBERON:0002062,6.92e-07,3;UBERON:0007280,6.92e-07,3;UBERON:0005631,7.55e-07,14;UBERON:0000158,7.55e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,3.05817920982241,1.31883489114227,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.662648841607426,1.16193942869518,0.310983165046111,0.756962552626885,0.72995471815166,0,0,0,0,0,1.8929088006375,2.69735504124963,1.68707720918437,2.64705534557745,3.92182999366331,2.84724742933316,2.56179485504312,4.31687223275761,4.61696588335668,0,0,0,0,0,0,0,0,3.32068784066407,0,0,0,0,0,0,0,0,0,0,0,0,0,22.915927540819,26.613071024941,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0,0,0,0,0.909382714338778,0,3.0239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,4.23008073570678,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.92295876118521,1.23764249880882,0,0,0,0,0,0,0,0,0,0,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,3.92064345569651,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,2.78365540616599,0,0,0,2.62618933211459,0.890894042497916,4.60741053148848,0,0.140669416410513,0,0,0,1.9924798825107,1.38141957765574,0,0,0,0,2.78591888556713,4.29650819221462,0,0.394573622547734,0,1.11136990144637,0,0,0,82.8160280251042,8.57107999962718,0.724999575434793,0,27.205140581326,0,1.03423011972439,0.874813840149763,0,0,0,0,0,0,0,0.980446171670911,5.01925479402972,0.230850775511391,0,0,0,0,3.82801391678303,1.64875668123352,55.9686514819566,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,5.97157158647103,1.50377859655677,6.11030144933625,0,0,0,0,96.3093176758547,0.234264445725339,0,16.0444987524314,0.242780379534093,0,0,0,0.063186579628488,0,0,6.64653872707185,0.661983911750998,5.33685961292283,4.77889719091835,0.569219092059585,0.138674673013139,0.173559738335131,1.37189356380129,0,6.29016005671309,0,1.64485763191445,3.06975131761979,2.21711734043665,3.29762656060626,0.176512253383001,9.94315259434343,0,0,0.126621591911757,16.0352133842538,3.36667045056442,0,0.799238438328521,0.288180834308212,0,0,0.14405479798815,0,0.942776138467182,0,0.627617077873999,0.101998217636322,0,0,0,0,0,0,18.4326384839688,22.457721553145,9.33234931949858,24.7601960618749,55.7993862577542,39.2781765097696,60.8010426004873,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0,0,14.2939065274673,34.4287824590024,1.017074150619,0,0,0,0,0,0,0,0,0,0,0,1.19760786519031,4.9337051562167,1.06787412567695,0.628817220398664,0,0,0,0,14.6818489287142,0.544017803369474,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0.415045904808692,0,0,0,0,2.34167452903441,5.21715702998971,0,0,0,0,0,0.889811221596536,0,0.453692771289717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,3.27453711692416,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,1.0362910251936,0,0.138258436151731,0,0,0,0.982829546539238,5.65277690133554,2.3244333569449,0.39997479170986,0,0,0,0,0,0,0,0.323474434190045,0,0,0.169732529954025,0,0,0,0,0,9.60684897942564,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,1.10057159113007,0.462102664601353,0,0,0.596748666348824,0.300841313397029,0.20170506870352,0,0,0,1.18284868973636,0.0675375846183947,0,0,0.0634158101939068,0,2.74128883428591,62.0263972986618,0,1.02209942111676,0,0,0.606965604236632,0.455324382702595,0.975726071789027,0,0,0,0.328863867814245,2.9548460220992,2.55832224351759,1.72684804271131,0,0.560544326627578,1.82631744101899,0.863710364874486,0,1.07214816264985,0,0,0,0,0,0,0.691259661814092,9.46500189404611,0,0,0,4.582137370881,0,0,0,0,0,192.933793481993,183.355773045257,73.0683091743065,22.3427056807204,0,4.97376937903421,0,0.11294608203896,0,4.83081099413355,1.77500563648273,0.655678681511872,0.940634592723046,0.245148321753905,0,0,0,2.5359343655004,0,0,0,0,12.8558835796073,0,6.74027480189013,0,8.71585638468627,0,0,0.135982980381829,0,0.5290268405154,0.371995018166751,0,1.29787968637137,0,0,0,1.52983244612973,2.13773924212448,2.11358268930143,0,0.0757786982182394,0,0,0,87.6391665613032,38.3283734656622,0.0645889098360061,0.248298857183432,0,1.78212043178862,8.69103912520343,113.21270890642,185.490449188222,6.39844503638581,11.7624416843989,23.6188853147669,0.244209805832924,0,0,1.61685363791856,23.4640942403454,0.122241444182866,0,0,3.22038069745642,0 | |||
|short_description=p2@MB | |||
}} |
Revision as of 15:36, 21 January 2014
Short description: | p2@MB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MB_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000419229_5end |
EntrezGene: | MB |
HGNC: | 6915 |
UniProt: | F2Z337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 3.19e-14 | 9 |
subdivision of digestive tract | 1.09e-12 | 118 |
digestive system | 4.21e-12 | 145 |
digestive tract | 4.21e-12 | 145 |
primitive gut | 4.21e-12 | 145 |
upper respiratory tract | 2.80e-11 | 19 |
respiratory primordium | 1.05e-10 | 38 |
endoderm of foregut | 1.05e-10 | 38 |
endoderm-derived structure | 1.31e-10 | 160 |
endoderm | 1.31e-10 | 160 |
presumptive endoderm | 1.31e-10 | 160 |
segment of respiratory tract | 1.57e-10 | 47 |
respiratory system | 1.17e-09 | 74 |
respiratory tract | 2.04e-09 | 54 |
foregut | 1.03e-08 | 87 |
adult organism | 2.57e-07 | 114 |
primordium | 3.21e-07 | 160 |
cardiac chamber | 6.53e-07 | 3 |
valve | 6.92e-07 | 3 |
cardiac mesenchyme | 6.92e-07 | 3 |
cardial valve | 6.92e-07 | 3 |
tunica intima | 6.92e-07 | 3 |
heart layer | 6.92e-07 | 3 |
endocardium | 6.92e-07 | 3 |
endocardial cushion | 6.92e-07 | 3 |
presumptive endocardium | 6.92e-07 | 3 |
extraembryonic membrane | 7.55e-07 | 14 |
membranous layer | 7.55e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.04e-24 | 106 |
cell type cancer | 4.24e-15 | 143 |
thoracic cancer | 7.57e-09 | 4 |
breast cancer | 7.57e-09 | 4 |