FFCP PHASE1:Hg19::chr21:43771096..43771112,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7032 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11756 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000463771,ENST00000475297_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_1_at_TFF2_5end | |||
|id=chr21:43771096..43771112,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002379;2.95e-13;1!CL:0002563;1.35e-12;4!CL:0002253;4.56e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,2.95e-13,1;CL:0002563,1.31e-12,4;CL:0002253,4.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.82e-13;1 | |||
|ontology_enrichment_disease=DOID:5093!1.21e-16!4;DOID:1612!1.21e-16!4;DOID:299!1.02e-11!25;DOID:3493!3.67e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3620;2.95e-13;1!DOID:3565;2.95e-13;1!DOID:3493;3.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.95e-13,1;DOID:3565,2.95e-13,1;DOID:3493,3.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.35e-10!155;UBERON:0001555!1.35e-10!155;UBERON:0007026!1.35e-10!155;UBERON:0004921!3.41e-10!129;UBERON:0004185!3.41e-10!129;UBERON:0004119!3.00e-09!169;UBERON:0000925!3.00e-09!169;UBERON:0006595!3.00e-09!169;UBERON:0000341!3.83e-09!2;UBERON:0003929!1.51e-08!54;UBERON:0005409!4.92e-08!35;UBERON:0000077!5.18e-08!130;UBERON:0007023!3.56e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.19e-18;22!UBERON:0004921;9.10e-15;33!UBERON:0002336;7.24e-13;1!UBERON:0011215;7.24e-13;1!UBERON:0001018;7.24e-13;1!UBERON:0002473;7.24e-13;1!UBERON:0005340;7.24e-13;1!UBERON:0003544;7.24e-13;1!UBERON:0005970;7.24e-13;1!UBERON:0002316;7.24e-13;1!UBERON:0001020;7.24e-13;1!UBERON:0002437;7.24e-13;1!UBERON:0002372;9.73e-13;1!UBERON:0001961;9.73e-13;1!UBERON:0001744;9.73e-13;1!UBERON:0001042;9.73e-13;1!UBERON:0001735;9.73e-13;1!UBERON:0001242;1.35e-12;4!UBERON:0001262;1.35e-12;4!UBERON:0004786;1.35e-12;4!UBERON:0004808;1.35e-12;4!UBERON:0001277;1.35e-12;4!UBERON:0000160;1.13e-10;17!UBERON:0000945;1.54e-10;5!UBERON:0010039;1.54e-10;5!UBERON:0002423;9.94e-08;25!UBERON:0001007;1.36e-07;81!UBERON:0000485;1.40e-07;7!UBERON:0003929;1.40e-07;7!UBERON:0005162;4.56e-07;2!UBERON:0000122;4.56e-07;2!UBERON:0006562;5.28e-07;2!UBERON:0003350;9.80e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.41e-16,25;UBERON:0002336,7.68e-13,1;UBERON:0011215,7.68e-13,1;UBERON:0001018,7.68e-13,1;UBERON:0002473,7.68e-13,1;UBERON:0005340,7.68e-13,1;UBERON:0003544,7.68e-13,1;UBERON:0005970,7.68e-13,1;UBERON:0002316,7.68e-13,1;UBERON:0001020,7.68e-13,1;UBERON:0002437,7.68e-13,1;UBERON:0002372,8.64e-13,1;UBERON:0001961,8.64e-13,1;UBERON:0001744,8.64e-13,1;UBERON:0001735,8.64e-13,1;UBERON:0001242,1.31e-12,4;UBERON:0001262,1.31e-12,4;UBERON:0004786,1.31e-12,4;UBERON:0004808,1.31e-12,4;UBERON:0001277,1.31e-12,4;UBERON:0000160,1.10e-10,17;UBERON:0004921,1.90e-10,118;UBERON:0003929,5.18e-10,54;UBERON:0001007,5.83e-10,145;UBERON:0001555,5.83e-10,145;UBERON:0007026,5.83e-10,145;UBERON:0004119,7.07e-09,160;UBERON:0000925,7.07e-09,160;UBERON:0006595,7.07e-09,160;UBERON:0009497,1.00e-07,25;UBERON:0000015,1.00e-07,25;UBERON:0002423,1.00e-07,25;UBERON:0006235,1.00e-07,25;UBERON:0004161,1.00e-07,25;UBERON:0005162,4.69e-07,2;UBERON:0000122,4.69e-07,2;UBERON:0011216,6.04e-07,223;UBERON:0000945,6.61e-07,8;UBERON:0010039,6.61e-07,8;UBERON:0003350,9.66e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,4.13552934676983,0,6.64137568132813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,2.08342208868187,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1097675715467,0,0,0,4.888241159469,0,0,0,3.10045211711114,0,0,0,0,0,0,411.368434565457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.775912131907355,0,0,0,0,0.0633107959558787,0,0,2768.27188877466,0,0.288180834308212,0,0,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,2.19828350517124,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,25.1734427077044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,21.8823923145266,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,57.6178661800918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.526234575056,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,7717.46461460095,0,0,0,0,0,295.726003848109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0,0,0,0.12729431655633,0.202117188958219,0.217716747896961,0,2.22261774948139,0.573777643141411,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@TFF2 | |||
}} |
Revision as of 13:57, 21 January 2014
Short description: | p1@TFF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TFF2_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_ENST00000463771, ENST00000475297_5end |
EntrezGene: | TFF2 |
HGNC: | 11756 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 2.95e-13 | 1 |
intestinal epithelial cell | 1.31e-12 | 4 |
epithelial cell of large intestine | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.95e-13 | 1 |
meningioma | 2.95e-13 | 1 |
signet ring cell adenocarcinoma | 3.28e-07 | 2 |