FFCP PHASE1:Hg19::chr20:47679880..47679883,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:47679880..47679883,+ | |||
|id=chr20:47679880..47679883,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.13e-11;18!CL:0002543;2.25e-09;6!CL:0002544;3.14e-09;6!CL:0002139;1.33e-08;24!CL:0000771;1.59e-07;2!CL:0002602;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,2.25e-11,18;CL:0002546,2.25e-11,18;CL:0002543,1.75e-09,6;CL:0002544,4.37e-09,6;CL:0002139,1.38e-08,24;CL:0002602,1.28e-07,2;CL:0000771,1.36e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;2.13e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;9.12e-14;1!DOID:4468;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.15e-14,1;DOID:4468,1.45e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;9.12e-14;1!UBERON:0004638;2.13e-11;18!UBERON:0001986;2.13e-11;18!UBERON:0004852;2.13e-11;18!UBERON:0000487;2.29e-09;22!UBERON:0006914;2.88e-08;25!UBERON:0006444;1.59e-07;2!UBERON:0001995;1.59e-07;2!UBERON:0004715;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.42e-13,1;UBERON:0004638,2.25e-11,18;UBERON:0001986,2.25e-11,18;UBERON:0004852,2.25e-11,18;UBERON:0000487,2.39e-09,22;UBERON:0006914,2.99e-08,25;UBERON:0006444,1.28e-07,2;UBERON:0001995,1.28e-07,2;UBERON:0004715,1.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.36142988256051,0.662794751455832,0,0.602694528023977,0,0,0.369363174230364,0.408001382488506,0,0.572471974262113,0.273748850145768,0,0.534893840235659,0.164201178899891,0.314843125254717,0,0,0,0,0,0,2.01414721508784,1.27952309238679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0.557052284425868,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,1.13061588384802,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.982297011124877,0,0,1.53316637465883,2.84779697870439,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0.622422070799533,0.134710672069688,0.490385709340376,0,0,0.234321431833797,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0,0.427114777637135,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0,1.1240175325762,0,0,0.325808305310325,0,0,0.231860809950154,0,0,0.462985512576611,0.190254152234598,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.448340575974109,0.197030760201927,0,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.459257792658427,0.182091168006717,0.131124414959424,0.902399225814824,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0.261435451024901,0,0.328014645699706,0,0,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0,0.511795582622668,0,0.318203247925937,0,1.07923474549989,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0.655894752046633,0.405820753925408,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0,0.75894634753143,0,0.769776901804097,0,1.08890984861323,0.0941438007767792,0.43050537267123,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0.822724546172388,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0.371606350251437,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0.524759999977174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,1.30586246527318,0.424059214301822,0,0,0,0,0.296521128680622,0.617819694732514,0.730953646538188,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.0870592065804026,0,0,0,0.219267951258557,0.164230914106418,0.193978032976839,0.441280633457501,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0.104602846312333,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.310525913752519,0.414706207840855,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0.231051332300676,0,1.3807198521202,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0.236387681767936,0.667388411352415,0,0,0,0,0.863710364874486,0,0,0.158013611732727,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687051635306701,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.399764623699716,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0.43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| |||
|short_description=p@chr20:47679880..47679883,+ | |||
}} |
Revision as of 11:52, 21 January 2014
Short description: | p@chr20:47679880..47679883, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:47679880..47679883, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.25e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.25e-11 | 18 |
vein endothelial cell | 1.75e-09 | 6 |
aortic endothelial cell | 4.37e-09 | 6 |
endothelial cell of vascular tree | 1.38e-08 | 24 |
annulus pulposus cell | 1.28e-07 | 2 |
eosinophil | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.42e-13 | 1 |
blood vessel endothelium | 2.25e-11 | 18 |
endothelium | 2.25e-11 | 18 |
cardiovascular system endothelium | 2.25e-11 | 18 |
simple squamous epithelium | 2.39e-09 | 22 |
squamous epithelium | 2.99e-08 | 25 |
annulus fibrosus | 1.28e-07 | 2 |
fibrocartilage | 1.28e-07 | 2 |
annulus fibrosus disci intervertebralis | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.15e-14 | 1 |
clear cell adenocarcinoma | 1.45e-07 | 2 |