FFCP PHASE1:Hg19::chr1:6484829..6484843,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |||
|TSSclassifier=strong | |||
|UniProt=B1AK53 | |||
|association_with_transcript=-4bp_to_ENST00000377828,NM_031475,uc001amy.2_5end | |||
|description=CAGE_peak_1_at_ESPN_5end | |||
|id=chr1:6484829..6484843,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.77e-15!43;CL:0000066!5.58e-15!254;CL:0000223!3.83e-10!59;CL:0002251!1.96e-07!21;CL:0002368!4.72e-07!13;CL:0000076!8.65e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.58e-13;42!CL:0002368;2.15e-10;13!CL:0002159;5.95e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.27e-17,42;CL:0000223,1.89e-12,58;CL:0000066,1.32e-10,253;CL:0002368,2.00e-10,13;CL:0002159,4.77e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000223;8.09e-08;58 | |||
|ontology_enrichment_disease=DOID:305!3.29e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.42e-07;4!DOID:1612;3.42e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.36e-07,4;DOID:1612,3.36e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001004!4.60e-10!72;UBERON:0004119!4.69e-10!169;UBERON:0000925!4.69e-10!169;UBERON:0006595!4.69e-10!169;UBERON:0000065!8.62e-08!53;UBERON:0000161!2.45e-07!35;UBERON:0001007!3.22e-07!155;UBERON:0001555!3.22e-07!155;UBERON:0007026!3.22e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.12e-08;15!UBERON:0000179;5.12e-08;15!UBERON:0000463;5.12e-08;15!UBERON:0003101;7.79e-07;22!UBERON:0000079;7.79e-07;22!UBERON:0003296;8.72e-07;4!UBERON:0010133;8.72e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.54e-08,160;UBERON:0000925,4.54e-08,160;UBERON:0006595,4.54e-08,160;UBERON:0000178,5.14e-08,15;UBERON:0000179,5.14e-08,15;UBERON:0000463,5.14e-08,15;UBERON:0001004,5.95e-08,74;UBERON:0003296,8.50e-07,4;UBERON:0010133,8.50e-07,4;UBERON:0003101,9.02e-07,22;UBERON:0000079,9.02e-07,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,1.88072832886853,0.572471974262113,0.273748850145768,0,0.382067028739756,0.492603536699674,0.393553906568396,0.393364276848904,0,0.154816123316076,3.67768489791571,7.53014796945625,8.50434223383612,0,0,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31692042387539,0.393419540227666,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,26.0648360240448,8.01449634243593,5.56176664176644,0.324547393654683,0.174129737299267,0.398873881556595,0,0.571994910780128,0,0.596287222100115,0.860234595106124,0.694281003215189,0.56530794192401,2.09749718104953,1.6507082516404,0.835979866147242,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,3.06633274931766,3.79706263827252,1.28241220751285,0,0,13.082821564276,0,0.12663051166458,0.132409180813219,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,5.72766853240753,6.59650569394709,1.09776335516636,0.530119073285941,0.813357600086629,0.725627385107593,1.00928340350251,0.36497735907583,0,0,0,0,0,1.0647612003586,1.01150814046861,0.241011029883482,0.661763836394364,0.653638332277218,0.71181185733329,0.404493924480493,0,0.769494313892781,0,0,0,0,0,0,0,0,0.737930631258681,0,3.51200913307602,3.37205259772859,0.201057944823262,5.46271826435325,0,0,0,18.8966560109375,0,0.433099343283221,0,0.380508304469197,13.4334747653077,20.6036678902769,0,0,0,0,1.6798212819886,2.69372684760534,0,0,0.383382679165211,0,0,1.03664057770386,0.144119953416961,0.50496973370552,0.063497894292169,0,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,2.03275699377971,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,14.2359593915332,7.27439812593581,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,5.26223703950243,8.10449898177192,0,0.328014645699706,0,0.412164046590889,0,0.082509499920588,4.01985876597321,5.20048196829217,0,0,0.154048617114644,0,0,0,0,0,0,7.10725136052206,5.95789208831829,29.6061492987435,11.6331447983882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,8.46754591984506,23.4605796437526,10.8890984861323,1.12972560932135,3.01353760869861,6.73885902670502,9.31203322427019,4.36474460393223,40.0883611293414,30.585488285695,51.2682468456746,60.2726391908206,58.0020805051534,31.7751922484432,35.1020434204775,58.691263045776,0,0,9.80160863924127,0,0.28853842595289,0,1.91311527274587,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15068535015921,1.78940886313933,2.33588798396672,0,11.6930593036002,3.69262196843137,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0.111308705022906,0,0.422250816255987,0.597743964753209,0.552567831062295,0,0,0,0,1.52776196950456,0,0,0.0986434056369336,59.8707730867349,0,0,0,0,14.3235268596878,18.1042199992125,0.724999575434793,4.43794448313449,0.254253650292766,0.236387681767936,19.9951156480049,0.291604613383254,0,0,0,0,0,0,0,0,5.43752602686553,5.61736887077719,0,2.3056390438806,6.28303510868405,2.49888955420619,1.27600463892768,0.549585560411174,0,0,0.627921025580099,8.64300745880813,1.35357396370308,0.980312671588698,1.34257269580674,1.70778359451767,4.60916079043098,0.210998064528027,0.163232808159148,0.141353071433941,0.216388639742091,3.98104772431402,0.796118080530053,1.22206028986725,0,0,0,0,0,0,0,1.36965233252463,0,10.6537788769335,0,0.30607276163049,0.063186579628488,0.901940516486955,0.103688191397247,0,0,0,0,2.84609546029793,0,70.6388135023983,5.19359706296202,0,24.1122802174002,0,0,0,0,7.85611033556197,0,47.0039940823508,0,0,0,2.93327074102205,0.64127056201227,0.426905989478705,4.99524023955326,0,0,0.343189995723929,2.16082196982225,0,1.17847017308398,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0.940568614814168,0,0,0.0787831823072236,0,0,0.295282444544246,0,0,0,0.482259445395058,0.137539436597234,0,1.799791132412,41.7853055461293,0,0,9.06265633940779,6.66173269314476,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.339936274560377,0,13.2506888912221,0.129282956361551,0,0,4.9337051562167,1.28144895081234,6.28817220398664,0.828478110694391,0,0,0.121792598380896,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.570930667089935,0.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| |||
|short_description=p1@ESPN | |||
}} |
Revision as of 16:03, 10 January 2014
Short description: | p1@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ESPN_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000377828, NM_031475, uc001amy.2_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | B1AK53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.27e-17 | 42 |
endodermal cell | 1.89e-12 | 58 |
epithelial cell | 1.32e-10 | 253 |
respiratory epithelial cell | 2.00e-10 | 13 |
general ecto-epithelial cell | 4.77e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.54e-08 | 160 |
endoderm | 4.54e-08 | 160 |
presumptive endoderm | 4.54e-08 | 160 |
blood | 5.14e-08 | 15 |
haemolymphatic fluid | 5.14e-08 | 15 |
organism substance | 5.14e-08 | 15 |
respiratory system | 5.95e-08 | 74 |
gland of diencephalon | 8.50e-07 | 4 |
neuroendocrine gland | 8.50e-07 | 4 |
male organism | 9.02e-07 | 22 |
male reproductive system | 9.02e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.36e-07 | 4 |
breast cancer | 3.36e-07 | 4 |