FFCP PHASE1:Hg19::chr1:56962127..56962135,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C666 | |||
|description=CAGE_peak_at_chr1:56962127..56962135,- | |||
|id=chr1:56962127..56962135,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.06e-40;3!CL:0000388;1.06e-40;3!CL:0000214;4.83e-19;3!CL:0000499;6.07e-17;28!CL:0000153;5.05e-14;9!CL:0000447;5.05e-14;9!CL:0000327;1.22e-08;15!CL:0002617;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,6.64e-41,3;CL:0000388,6.64e-41,3;CL:0000214,4.62e-19,3;CL:0000499,4.98e-17,28;CL:0000153,4.33e-14,9;CL:0000447,4.33e-14,9;CL:0000327,1.11e-08,15;CL:0002617,6.58e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003099;7.63e-15;1!UBERON:0003852;7.63e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!8.25e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.06e-40;3!UBERON:0000043;1.06e-40;3!UBERON:0007845;1.06e-40;3!UBERON:0006915;4.83e-19;3!UBERON:0007616;4.83e-19;3!UBERON:0002217;4.83e-19;3!UBERON:0002018;4.83e-19;3!UBERON:0004905;1.07e-15;8!UBERON:0000982;1.07e-15;8!UBERON:0004770;1.07e-15;8!UBERON:0005705;7.63e-15;1!UBERON:0008193;7.63e-15;1!UBERON:0010912;7.63e-15;1!UBERON:0002514;7.63e-15;1!UBERON:0003457;7.63e-15;1!UBERON:0008907;7.63e-15;1!UBERON:0008001;7.63e-15;1!UBERON:0007213;7.63e-15;1!UBERON:0009891;7.63e-15;1!UBERON:0007914;7.63e-15;1!UBERON:0007375;7.63e-15;1!UBERON:0003323;7.63e-15;1!UBERON:0010258;7.63e-15;1!UBERON:0005253;7.63e-15;1!UBERON:0007842;7.63e-15;1!UBERON:0002397;7.63e-15;1!UBERON:0003113;7.63e-15;1!UBERON:0003277;7.63e-15;1!UBERON:0001709;7.63e-15;1!UBERON:0002244;7.63e-15;1!UBERON:0005620;7.63e-15;1!UBERON:0010364;7.63e-15;1!UBERON:0004288;7.63e-15;1!UBERON:0004457;3.79e-14;9!UBERON:0000042;3.79e-14;9!UBERON:0004089;4.53e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.64e-41,3;UBERON:0000043,6.64e-41,3;UBERON:0007845,6.64e-41,3;UBERON:0006915,4.62e-19,3;UBERON:0007616,4.62e-19,3;UBERON:0002217,4.62e-19,3;UBERON:0002018,4.62e-19,3;UBERON:0004905,1.28e-15,8;UBERON:0000982,1.28e-15,8;UBERON:0004770,1.28e-15,8;UBERON:0005705,8.17e-15,1;UBERON:0008193,8.17e-15,1;UBERON:0010912,8.17e-15,1;UBERON:0002514,8.17e-15,1;UBERON:0003457,8.17e-15,1;UBERON:0008907,8.17e-15,1;UBERON:0008001,8.17e-15,1;UBERON:0007213,8.17e-15,1;UBERON:0009891,8.17e-15,1;UBERON:0007914,8.17e-15,1;UBERON:0009292,8.17e-15,1;UBERON:0003099,8.17e-15,1;UBERON:0007375,8.17e-15,1;UBERON:0003323,8.17e-15,1;UBERON:0010258,8.17e-15,1;UBERON:0007842,8.17e-15,1;UBERON:0009494,8.17e-15,1;UBERON:0010042,8.17e-15,1;UBERON:0010045,8.17e-15,1;UBERON:0010259,8.17e-15,1;UBERON:0010359,8.17e-15,1;UBERON:0009526,8.17e-15,1;UBERON:0002397,8.17e-15,1;UBERON:0003113,8.17e-15,1;UBERON:0003277,8.17e-15,1;UBERON:0001709,8.17e-15,1;UBERON:0004066,8.17e-15,1;UBERON:0002244,8.17e-15,1;UBERON:0005620,8.17e-15,1;UBERON:0004362,8.17e-15,1;UBERON:0010364,8.17e-15,1;UBERON:0010046,8.17e-15,1;UBERON:0005868,8.17e-15,1;UBERON:0007238,8.17e-15,1;UBERON:0004288,8.17e-15,1;UBERON:0004068,8.17e-15,1;UBERON:0010334,8.17e-15,1;UBERON:0003852,8.17e-15,1;UBERON:0010253,8.17e-15,1;UBERON:0004457,9.61e-11,12;UBERON:0000042,9.61e-11,12;UBERON:0005253,4.69e-08,2;UBERON:0004089,4.69e-08,2 | |||
|phase1_expression=0.181678379270557,1.71280419112787,0.140954404095971,2.00146596706261,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0.572471974262113,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88300474649071,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,1.1409436430889,0,0,0.161872944368132,0,0,0,0,0,1.48360157567134,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0,0.257640540045629,0,0.168776332241266,0,0.504867548488229,0.184099797284599,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.868687840005475,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.00034104211935,0.271265023699736,0,0.892144943985809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0.153461973288062,1.12264037773229,0.256278298511402,0,0,0,0,0,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,4.01104507065562,2.63435914367922,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0.439656701034247,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0,0.443565449968902,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1160556621441,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0.0802413666891683,0,0.458729283404541,0.286679166302903,0,0,0,0,2.97596014533401,5.0839319149456,1.73050624849516,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0,0,0,0.25458863311266,1.21270313374932,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p@chr1:56962127..56962135,- | |||
}} |
Revision as of 18:40, 10 January 2014
Short description: | p@chr1:56962127..56962135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:56962127..56962135, - |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 6.64e-41 | 3 |
tendon cell | 6.64e-41 | 3 |
synovial cell | 4.62e-19 | 3 |
stromal cell | 4.98e-17 | 28 |
GAG secreting cell | 4.33e-14 | 9 |
carbohydrate secreting cell | 4.33e-14 | 9 |
extracellular matrix secreting cell | 1.11e-08 | 15 |
adipocyte of breast | 6.58e-08 | 2 |