FFCP PHASE1:Hg19::chr1:53990536..53990551,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr1:53990536..53990551,- | |||
|id=chr1:53990536..53990551,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.18e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.52e-08;3!UBERON:0006241;7.26e-08;3!UBERON:0003057;7.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-39!115;UBERON:0001049!8.10e-39!57;UBERON:0005068!8.10e-39!57;UBERON:0006241!8.10e-39!57;UBERON:0007135!8.10e-39!57;UBERON:0002616!1.48e-31!59;UBERON:0003075!8.49e-30!86;UBERON:0007284!8.49e-30!86;UBERON:0002346!3.95e-28!90;UBERON:0005743!2.55e-27!86;UBERON:0002020!3.88e-27!34;UBERON:0003528!3.88e-27!34;UBERON:0000073!5.03e-26!94;UBERON:0001016!5.03e-26!94;UBERON:0000955!1.34e-25!69;UBERON:0006238!1.34e-25!69;UBERON:0002791!1.01e-24!33;UBERON:0002780!1.48e-24!41;UBERON:0001890!1.48e-24!41;UBERON:0006240!1.48e-24!41;UBERON:0001017!1.67e-24!82;UBERON:0002308!5.94e-24!9;UBERON:0000125!5.94e-24!9;UBERON:0001893!6.88e-24!34;UBERON:0003080!7.18e-24!42;UBERON:0003056!4.10e-21!61;UBERON:0001869!2.10e-19!32;UBERON:0002420!2.43e-18!9;UBERON:0007245!2.43e-18!9;UBERON:0010009!2.43e-18!9;UBERON:0010011!2.43e-18!9;UBERON:0000454!2.43e-18!9;UBERON:0009663!1.37e-17!7;UBERON:0000153!6.23e-17!129;UBERON:0007811!6.23e-17!129;UBERON:0000033!8.39e-17!123;UBERON:0003076!1.05e-16!15;UBERON:0003057!1.05e-16!15;UBERON:0002298!2.72e-15!8;UBERON:0004733!7.79e-13!12;UBERON:0002028!7.79e-13!12;UBERON:0007277!7.79e-13!12;UBERON:0002619!1.40e-12!22;UBERON:0004121!3.17e-12!169;UBERON:0000924!9.03e-12!173;UBERON:0006601!9.03e-12!173;UBERON:0004732!9.08e-12!13;UBERON:0006331!1.12e-11!3;UBERON:0000988!2.68e-11!3;UBERON:0001950!3.11e-11!20;UBERON:0000956!6.73e-11!25;UBERON:0000203!6.73e-11!25;UBERON:0002771!1.61e-10!3;UBERON:0000025!8.92e-10!194;UBERON:0002680!3.23e-09!9;UBERON:0001895!3.23e-09!9;UBERON:0010092!3.23e-09!9;UBERON:0000064!1.53e-08!219;UBERON:0004111!1.90e-08!241;UBERON:0001875!2.78e-08!2;UBERON:0006514!2.78e-08!2;UBERON:0002148!3.32e-08!2;UBERON:0009662!3.32e-08!2;UBERON:0000481!3.91e-08!347;UBERON:0000369!4.43e-08!4;UBERON:0002435!4.43e-08!4;UBERON:0000204!4.43e-08!4;UBERON:0010082!4.43e-08!4;UBERON:0000483!8.05e-08!309;UBERON:0000477!1.06e-07!286;UBERON:0000119!1.17e-07!312;UBERON:0000475!2.11e-07!365;UBERON:0001871!6.70e-07!7;UBERON:0000349!7.31e-07!5;UBERON:0005174!8.74e-07!5;UBERON:0001137!8.74e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.88e-21;1!UBERON:0009661;1.88e-21;1!UBERON:0002950;1.88e-21;1!UBERON:0001891;1.88e-21;1!UBERON:0000125;1.98e-20;9!UBERON:0002308;1.98e-20;9!UBERON:0000966;4.64e-17;5!UBERON:0005388;4.64e-17;5!UBERON:0001802;4.64e-17;5!UBERON:0009663;2.37e-12;7!UBERON:0001897;2.47e-11;2!UBERON:0010225;2.47e-11;2!UBERON:0002148;3.70e-11;2!UBERON:0001875;3.70e-11;2!UBERON:0006331;3.70e-11;2!UBERON:0009662;3.70e-11;2!UBERON:0006514;3.70e-11;2!UBERON:0002420;8.09e-10;9!UBERON:0007245;8.09e-10;9!UBERON:0010009;8.09e-10;9!UBERON:0010011;8.09e-10;9!UBERON:0000454;8.09e-10;9!UBERON:0000970;1.24e-09;20!UBERON:0002104;3.35e-09;21!UBERON:0000020;1.88e-08;23!UBERON:0001032;4.00e-08;24!UBERON:0004456;4.00e-08;24!UBERON:0001781;5.54e-08;3!UBERON:0001782;5.54e-08;3!UBERON:0000988;7.26e-08;3!UBERON:0002240;7.26e-08;3!UBERON:0005174;7.26e-08;3!UBERON:0001137;7.26e-08;3!UBERON:0000073;2.42e-07;53!UBERON:0002616;2.42e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.88e-21,1;UBERON:0009661,1.88e-21,1;UBERON:0002950,1.88e-21,1;UBERON:0001891,1.88e-21,1;UBERON:0009616,1.88e-21,1;UBERON:0010286,1.88e-21,1;UBERON:0000125,2.11e-20,9;UBERON:0002308,2.11e-20,9;UBERON:0003075,5.56e-15,82;UBERON:0007284,5.56e-15,82;UBERON:0000966,2.04e-14,6;UBERON:0005388,2.04e-14,6;UBERON:0001802,2.04e-14,6;UBERON:0002346,2.81e-14,86;UBERON:0001049,1.96e-12,56;UBERON:0005068,1.96e-12,56;UBERON:0006241,1.96e-12,56;UBERON:0007135,1.96e-12,56;UBERON:0009663,2.24e-12,7;UBERON:0010371,9.03e-12,104;UBERON:0003056,1.53e-11,61;UBERON:0001897,2.47e-11,2;UBERON:0010225,2.47e-11,2;UBERON:0001875,3.35e-11,2;UBERON:0006514,3.35e-11,2;UBERON:0002148,4.52e-11,2;UBERON:0006331,4.52e-11,2;UBERON:0009662,4.52e-11,2;UBERON:0007023,8.46e-11,114;UBERON:0002420,7.74e-10,9;UBERON:0007245,7.74e-10,9;UBERON:0010009,7.74e-10,9;UBERON:0010011,7.74e-10,9;UBERON:0000454,7.74e-10,9;UBERON:0003528,2.04e-09,34;UBERON:0002020,2.04e-09,34;UBERON:0000073,2.63e-09,53;UBERON:0002616,2.63e-09,53;UBERON:0010314,3.30e-09,132;UBERON:0000970,3.35e-09,21;UBERON:0002104,3.35e-09,21;UBERON:0001017,1.66e-08,81;UBERON:0000020,4.00e-08,24;UBERON:0001032,4.00e-08,24;UBERON:0004456,4.00e-08,24;UBERON:0001782,5.18e-08,3;UBERON:0005424,5.18e-08,3;UBERON:0002780,6.02e-08,41;UBERON:0001890,6.02e-08,41;UBERON:0003080,6.02e-08,41;UBERON:0006240,6.02e-08,41;UBERON:0002240,7.26e-08,3;UBERON:0005174,7.26e-08,3;UBERON:0001137,7.26e-08,3;UBERON:0000988,8.29e-08,3;UBERON:0001016,1.17e-07,89;UBERON:0000955,3.42e-07,68;UBERON:0006238,3.42e-07,68;UBERON:0004121,6.32e-07,171;UBERON:0000924,6.32e-07,171;UBERON:0006601,6.32e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,2.15460723810632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.36905378891993,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.887432412294818,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655257829152084,0,0,0,0,0,0,0,0,0,0.385375350578757,0,1.59633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.339848664884159,0,0,0,0.078493092850514,0.314231179832004,0,0.913158720509496,0,0,6.7187951526057,0,0.23248285073625,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.874238242015829,0,0,0,0.196308467114945,1.18818560130834,0,0,0,0,0,0,0,0,0,0,3.29681041248338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48239190068549,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:53990536..53990551,- | |||
}} |
Revision as of 18:35, 10 January 2014
Short description: | p@chr1:53990536..53990551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:53990536..53990551, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.18e-08 | 3 |