FFCP PHASE1:Hg19::chr1:24306809..24306828,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505793,10772 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16713 | |||
|TSSclassifier=strong | |||
|UniProt=O75494 | |||
|association_with_transcript=0bp_to_ENST00000343255,ENST00000473858,ENST00000485292,ENST00000492112,uc001bij.1,uc010oee.1,uc010oef.1_5end | |||
|coexpression_cluster_id=C3956 | |||
|description=CAGE_peak_1_at_SRSF10_5end | |||
|id=chr1:24306809..24306828,- | |||
|ontology_enrichment_celltype=CL:0000037!1.32e-33!172;CL:0000566!1.32e-33!172;CL:0000988!7.08e-31!182;CL:0002032!2.21e-30!165;CL:0000837!2.21e-30!165;CL:0000542!8.16e-24!53;CL:0000051!8.16e-24!53;CL:0000838!3.35e-23!52;CL:0000738!1.58e-21!140;CL:0002031!3.74e-19!124;CL:0002087!6.69e-19!119;CL:0000945!9.60e-12!24;CL:0000826!9.60e-12!24;CL:0000084!2.84e-11!25;CL:0000827!2.84e-11!25;CL:0000763!2.37e-10!112;CL:0000049!2.37e-10!112;CL:0000219!4.34e-09!390;CL:0000791!1.00e-08!18;CL:0000789!1.00e-08!18;CL:0002420!1.00e-08!18;CL:0002419!1.00e-08!18;CL:0000790!1.00e-08!18;CL:0000236!9.26e-08!14;CL:0000134!2.77e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.80e-14;53!CL:0000945;1.00e-11;24!CL:0000084;2.93e-11;25!CL:0000791;1.04e-08;18!CL:0000789;1.04e-08;18!CL:0002419;1.04e-08;18!CL:0000236;2.79e-07;13!CL:0002087;3.10e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.00e-33,168;CL:0000988,7.26e-31,177;CL:0002032,1.12e-29,161;CL:0000837,1.12e-29,161;CL:0000542,8.16e-24,53;CL:0000051,8.16e-24,53;CL:0000838,3.35e-23,52;CL:0000738,6.95e-21,136;CL:0002031,1.55e-18,120;CL:0002087,2.73e-18,115;CL:0000945,9.60e-12,24;CL:0000826,9.60e-12,24;CL:0000084,2.84e-11,25;CL:0000827,2.84e-11,25;CL:0000763,8.19e-10,108;CL:0000049,8.19e-10,108;CL:0000219,9.44e-09,386;CL:0000791,1.00e-08,18;CL:0000789,1.00e-08,18;CL:0002420,1.00e-08,18;CL:0002419,1.00e-08,18;CL:0000790,1.00e-08,18;CL:0000236,9.26e-08,14;CL:0000134,5.45e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;6.80e-14;53!CL:0000790;1.04e-08;18 | |||
|ontology_enrichment_disease=DOID:162!2.24e-28!235;DOID:14566!2.69e-26!239;DOID:2531!1.09e-18!51;DOID:0060083!1.09e-18!51;DOID:0050686!2.82e-18!137;DOID:1240!3.47e-15!39;DOID:0050687!1.22e-13!143;DOID:305!5.93e-12!106;DOID:8692!4.01e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.70e-12;39!DOID:2531;1.26e-11;51!DOID:0060083;1.26e-11;51!DOID:8692;6.55e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.24e-28,235;DOID:14566,2.69e-26,239;DOID:2531,1.09e-18,51;DOID:0060083,1.09e-18,51;DOID:0050686,2.82e-18,137;DOID:1240,3.47e-15,39;DOID:0050687,1.22e-13,143;DOID:305,5.93e-12,106;DOID:8692,4.01e-11,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.48e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.75e-07,371 | |||
|phase1_expression=39.7875650602519,35.7547874897942,40.5948683796397,29.0212565224078,33.0751209876193,30.5318483435129,20.2639902534648,25.9005148105001,17.4994370893892,28.7508705706765,18.1428303672831,46.3095708915965,19.5187563889056,28.9613265926509,30.1571611912403,16.8081286612944,25.313170177007,19.7183724404591,19.5173119516203,43.5848545591829,26.7240905529971,15.0458266309482,62.3994451945704,56.2553887049554,61.6414360410482,84.1311597284943,88.5865360164915,90.2025553854764,81.819769584572,107.856060865317,50.4700562010408,28.5020579588467,16.867531451582,20.7062245693401,123.715119326742,125.819770751368,102.466553327862,72.5733985176759,68.1851121398482,61.1970655418702,34.7068985071883,41.7822829164484,40.1817885509331,39.1121262317029,50.6353764543005,50.9426528494414,46.9506654549483,61.264015315252,64.4189251461816,50.9215534410206,51.7444627188783,81.3498870816733,41.7142273691308,56.1571674717929,52.8163297717933,43.6722227738843,56.7644792120319,77.080155164664,45.3004160708936,66.4323086047514,52.4256443155214,52.7762080298746,49.0680597749214,65.6386115820349,58.3320569643454,97.0228734221849,94.0461595983318,49.7472357208352,47.4549455762383,65.156653411535,70.2263423054708,88.7549102730031,96.5210281694698,50.912524001178,47.6233631921698,44.4476328477757,39.8766640570058,41.1484686385727,58.8255647311313,43.3219370486698,40.9768355030126,47.1273516712756,79.1983100075952,82.4669303005819,82.7243606093106,64.4362636075426,84.0831572775626,78.1663318338097,74.6980706246894,90.6351066808596,126.934492111407,137.4135023128,131.501990475079,107.058776149011,155.260871945885,86.3899798062253,128.254770114219,93.9295722970504,102.595148000755,49.4872026356407,100.058135856512,99.424039204294,97.4133642039557,55.4824075288164,77.1867477584073,77.758396998851,81.2411591295047,48.4185188563052,48.121958597155,51.6335020455543,62.7314540373876,69.8425436621476,96.3862660553393,90.6963407224127,86.7644847581307,75.9172596073693,73.9615552651708,80.0651947974528,94.1233254312551,79.6413535810242,79.4321813704831,66.5316431113862,90.1944963275859,92.2783466423357,93.6980449142594,65.3505215641487,60.7634717721574,107.658000882007,85.8483028465059,87.184291137445,36.5710299470943,34.8764447045891,35.2900670688144,50.2400421814547,26.5709092637021,34.6183180316369,79.5285947051099,31.1446316993687,55.3028680409797,42.3503149153497,55.9507584865213,36.4121829883641,13.8432209551166,19.2807910247903,30.8320023971949,32.562260874963,29.6496251957069,96.1117215950528,121.834915996167,135.210530483962,39.5537190659743,25.8070378531837,41.3097196913037,28.8307050381245,25.5894656088043,37.4160537038492,28.2143204824694,36.953596561214,43.4034840477786,62.2580339742287,30.212198783186,30.4108842287405,18.0605922585645,57.3554405339555,23.494116488571,56.3481285472543,40.6398164453367,48.9859940102452,33.7296602424943,27.5287041274757,30.7778929803084,50.076558625704,73.6782501881818,19.1881382942715,44.2305037008833,41.4081773143176,52.5664447828479,41.0176367670804,50.3629102721667,31.3979456079692,18.1473292740498,22.4467469059616,55.3955643011584,52.4024514351087,44.4616376468608,36.6284974900734,29.3849721484799,40.303286275413,22.4755255317831,29.0940628987669,27.3491085409796,71.2827406767653,67.9866366346152,72.332165451658,31.6438965445085,42.2550051552482,30.6877570092023,28.5120685747693,34.8646370282765,27.3048408581408,17.965453545406,50.5008341862199,60.3071265782867,52.0880537110264,46.9706054342497,32.1812185588971,36.507848314303,42.0833399523678,57.0459041490581,44.2063794854435,43.4460397377102,53.716306199108,55.4422607302801,53.5892323294909,42.0624095309393,53.1645446559989,53.2980418231757,42.4088740730112,41.0542547944655,37.9868233524208,43.6661798795436,47.4542382652186,43.9161934084163,34.2071710099035,43.0938870533519,47.3227582391856,66.1097487222407,94.3611950448975,67.0439050357121,52.1415106727313,64.8464586750365,92.339271846185,21.9029345261742,20.5837100221723,23.4829366299217,25.5402360417588,10.8281922250438,53.2380600179297,59.3418109074918,67.7240993972584,51.8381671842252,54.6877404671939,69.2830207804402,43.6853438438933,55.7268960955983,56.5578320711194,25.8354409118627,29.4507724987236,23.4597186458898,23.5213938216867,43.0967118394225,58.9696330006576,41.9460833743797,160.692568186933,45.1367569453227,35.6861045420933,29.6325770603289,33.7205259772859,38.2010095164197,29.720890895888,33.5582554469634,21.8386304908711,43.299402607582,36.5180775671492,43.0889907845466,31.0387862686309,26.3901742168668,44.1389633184268,37.1396067040859,41.2073357805539,32.5006448035364,33.2286056497718,28.3885519971471,43.1175636339174,48.2108707930727,39.980577422353,57.85480566604,57.2548858872505,23.7697261082431,224.161773242654,56.3509977684647,48.1001228054591,53.9008625779436,43.9323668323802,57.846581700166,39.7267962580609,32.8208852188132,20.5286935227246,43.5988569062092,39.945626693241,36.2999569440834,51.4681677145206,44.4679270209946,61.4574835179561,38.78151472733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| |||
|short_description=p1@SRSF10 | |||
}} |
Revision as of 17:03, 10 January 2014
Short description: | p1@SRSF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRSF10_5end |
Coexpression cluster: | C3956_Mast_cord_Hodgkin_granulocyte_rhabdomyosarcoma_lymphoma_acute |
Association with transcript: | 0bp_to_ENST00000343255, ENST00000473858, ENST00000485292, ENST00000492112, uc001bij.1, uc010oee.1, uc010oef.1_5end |
EntrezGene: | 100505793,10772 |
HGNC: | 16713 |
UniProt: | O75494 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.00e-33 | 168 |
hematopoietic cell | 7.26e-31 | 177 |
hematopoietic oligopotent progenitor cell | 1.12e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-29 | 161 |
lymphocyte | 8.16e-24 | 53 |
common lymphoid progenitor | 8.16e-24 | 53 |
lymphoid lineage restricted progenitor cell | 3.35e-23 | 52 |
leukocyte | 6.95e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 1.55e-18 | 120 |
nongranular leukocyte | 2.73e-18 | 115 |
lymphocyte of B lineage | 9.60e-12 | 24 |
pro-B cell | 9.60e-12 | 24 |
T cell | 2.84e-11 | 25 |
pro-T cell | 2.84e-11 | 25 |
myeloid cell | 8.19e-10 | 108 |
common myeloid progenitor | 8.19e-10 | 108 |
motile cell | 9.44e-09 | 386 |
mature alpha-beta T cell | 1.00e-08 | 18 |
alpha-beta T cell | 1.00e-08 | 18 |
immature T cell | 1.00e-08 | 18 |
mature T cell | 1.00e-08 | 18 |
immature alpha-beta T cell | 1.00e-08 | 18 |
B cell | 9.26e-08 | 14 |
mesenchymal cell | 5.45e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.75e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.24e-28 | 235 |
disease of cellular proliferation | 2.69e-26 | 239 |
hematologic cancer | 1.09e-18 | 51 |
immune system cancer | 1.09e-18 | 51 |
organ system cancer | 2.82e-18 | 137 |
leukemia | 3.47e-15 | 39 |
cell type cancer | 1.22e-13 | 143 |
carcinoma | 5.93e-12 | 106 |
myeloid leukemia | 4.01e-11 | 31 |