FFCP PHASE1:Hg19::chr1:21948998..21949075,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5909 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9858 | |||
|TSSclassifier=strong | |||
|UniProt=P47736,Q5T3T1 | |||
|association_with_transcript=0bp_to_ENST00000374763,uc001bez.1_5end | |||
|description=CAGE_peak_2_at_RAP1GAP_5end | |||
|id=chr1:21948998..21949075,- | |||
|ontology_enrichment_celltype=CL:0000066!2.56e-12!254;CL:0000223!7.58e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.01e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.81e-08;82!UBERON:0008947;1.30e-07;29 | |||
|ontology_enrichment_disease=DOID:305!2.62e-17!106;DOID:0050687!1.52e-15!143;DOID:299!2.59e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.54e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.21e-15,106;DOID:0050687,6.57e-12,143;DOID:299,1.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-26!115;UBERON:0005743!8.70e-24!86;UBERON:0000073!6.73e-23!94;UBERON:0001016!6.73e-23!94;UBERON:0001017!7.43e-23!82;UBERON:0001049!2.01e-20!57;UBERON:0005068!2.01e-20!57;UBERON:0006241!2.01e-20!57;UBERON:0007135!2.01e-20!57;UBERON:0002780!1.25e-19!41;UBERON:0001890!1.25e-19!41;UBERON:0006240!1.25e-19!41;UBERON:0003080!1.38e-19!42;UBERON:0000924!4.03e-19!173;UBERON:0006601!4.03e-19!173;UBERON:0002616!2.77e-18!59;UBERON:0004121!4.66e-18!169;UBERON:0000955!5.27e-18!69;UBERON:0006238!5.27e-18!69;UBERON:0002346!1.03e-16!90;UBERON:0001893!3.15e-16!34;UBERON:0004921!5.05e-16!129;UBERON:0004185!5.05e-16!129;UBERON:0002020!5.54e-16!34;UBERON:0003528!5.54e-16!34;UBERON:0004119!8.23e-16!169;UBERON:0000925!8.23e-16!169;UBERON:0006595!8.23e-16!169;UBERON:0002791!8.93e-16!33;UBERON:0001869!9.49e-16!32;UBERON:0003075!1.25e-15!86;UBERON:0007284!1.25e-15!86;UBERON:0001007!2.47e-15!155;UBERON:0001555!2.47e-15!155;UBERON:0007026!2.47e-15!155;UBERON:0000481!6.77e-15!347;UBERON:0003056!6.21e-14!61;UBERON:0000064!7.26e-14!219;UBERON:0000153!1.10e-13!129;UBERON:0007811!1.10e-13!129;UBERON:0000033!2.72e-13!123;UBERON:0000062!3.42e-13!511;UBERON:0000077!1.43e-12!130;UBERON:0000956!3.19e-12!25;UBERON:0000203!3.19e-12!25;UBERON:0002619!8.59e-12!22;UBERON:0001041!2.27e-11!98;UBERON:0001950!5.90e-11!20;UBERON:0000922!9.24e-11!612;UBERON:0000475!1.11e-10!365;UBERON:0005177!4.19e-10!107;UBERON:0000468!1.17e-09!659;UBERON:0004111!5.71e-09!241;UBERON:0002050!6.38e-09!605;UBERON:0005423!6.38e-09!605;UBERON:0000025!9.73e-09!194;UBERON:0000923!1.12e-08!604;UBERON:0005291!1.12e-08!604;UBERON:0006598!1.12e-08!604;UBERON:0002532!1.12e-08!604;UBERON:0005409!1.38e-08!35;UBERON:0000466!1.91e-08!126;UBERON:0000477!2.01e-08!286;UBERON:0000160!5.57e-08!27;UBERON:0000467!1.02e-07!625;UBERON:0000464!1.29e-07!104;UBERON:0000480!1.41e-07!626;UBERON:0008947!2.75e-07!38;UBERON:0003258!2.75e-07!38;UBERON:0001004!3.63e-07!72;UBERON:0000483!4.77e-07!309;UBERON:0005911!8.14e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.02e-17;41!UBERON:0001890;2.02e-17;41!UBERON:0001869;5.16e-17;32!UBERON:0002791;9.13e-17;32!UBERON:0001893;1.17e-16;34!UBERON:0003528;1.85e-16;34!UBERON:0002020;1.85e-16;34!UBERON:0002619;1.37e-14;22!UBERON:0000956;2.47e-14;25!UBERON:0000203;2.47e-14;25!UBERON:0001950;1.51e-13;20!UBERON:0000073;1.27e-12;53!UBERON:0002616;1.27e-12;53!UBERON:0001017;2.20e-09;75!UBERON:0000955;3.21e-09;68!UBERON:0004921;1.43e-08;33!UBERON:0000922;1.54e-08;49!UBERON:0001016;4.00e-08;83!UBERON:0007023;1.50e-07;114!UBERON:0005409;9.48e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.06e-29,223;UBERON:0007023,4.49e-26,114;UBERON:0001017,4.35e-24,81;UBERON:0002780,9.07e-24,41;UBERON:0001890,9.07e-24,41;UBERON:0003080,9.07e-24,41;UBERON:0006240,9.07e-24,41;UBERON:0001049,4.54e-23,56;UBERON:0005068,4.54e-23,56;UBERON:0006241,4.54e-23,56;UBERON:0007135,4.54e-23,56;UBERON:0001016,2.92e-22,89;UBERON:0000073,8.52e-22,53;UBERON:0002616,8.52e-22,53;UBERON:0001893,1.96e-19,34;UBERON:0003528,3.98e-19,34;UBERON:0002020,3.98e-19,34;UBERON:0001869,8.25e-19,32;UBERON:0002791,1.72e-18,32;UBERON:0000955,3.70e-18,68;UBERON:0006238,3.70e-18,68;UBERON:0004121,3.98e-17,171;UBERON:0000924,3.98e-17,171;UBERON:0006601,3.98e-17,171;UBERON:0003056,5.23e-17,61;UBERON:0002346,4.03e-16,86;UBERON:0003075,3.09e-15,82;UBERON:0007284,3.09e-15,82;UBERON:0002619,1.24e-14,22;UBERON:0000956,2.51e-14,25;UBERON:0000203,2.51e-14,25;UBERON:0010371,1.18e-13,104;UBERON:0001950,1.46e-13,20;UBERON:0001007,2.15e-11,145;UBERON:0001555,2.15e-11,145;UBERON:0007026,2.15e-11,145;UBERON:0004921,3.62e-11,118;UBERON:0004119,4.82e-11,160;UBERON:0000925,4.82e-11,160;UBERON:0006595,4.82e-11,160;UBERON:0004111,3.87e-09,240;UBERON:0000025,5.21e-09,192;UBERON:0000922,5.70e-09,592;UBERON:0001041,1.62e-08,87;UBERON:0005177,2.56e-08,101;UBERON:0010314,2.59e-08,132;UBERON:0002420,7.55e-07,9;UBERON:0007245,7.55e-07,9;UBERON:0010009,7.55e-07,9;UBERON:0010011,7.55e-07,9;UBERON:0000454,7.55e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,4.88460817580699,0.873765488520689,1.84636884759917,0.123766352960047,0,0,0,0,0,2.21617904538218,0,2.19418305034661,2.0036519099174,0.684372125364421,2.63639543149086,0,0,0,0,0,0,0.919421224478927,2.10844143144775,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.472674085820339,0,0.351339142772504,11.9845854080407,5.82872461268068,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,2.18047026071267,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0,2.31913023795956,1.09098448236334,2.29443676311203,3.17131635936948,2.12047629314376,4.06678800043314,2.69518743039963,2.77552935963191,1.82488679537915,0,0,0,0,0,2.12952240071719,1.01150814046861,1.44606617930089,2.31617342738027,1.74303555273925,2.84724742933316,1.48314438976181,1.56977172100277,1.92373578473195,0,0,1.2347220339942,1.47008711385542,62.1099670626971,94.3514128010521,30.1302852407516,0,1.22988438543114,0,0.768251997860379,1.1240175325762,1.60846355858609,1.11106134190236,0,0,0,1.15930404975077,0,0,0,0,3.95102198979638,6.00940313466411,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0.621984346622316,0,0.88369703398466,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.899756920638513,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,5.59008173289419,3.90419561572865,7.73288812777695,15.0764638800914,7.01732626818479,0,0,0.414415513436035,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,2.15381273209015,0,0,0,0,0,0,0.907170879989041,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.966875596732978,0.601519410909855,1.28913384510255,0.114814448164607,0,0.393373244878272,1.80479845162965,1.84836809050595,9.41219723012226,1.46139224653261,3.69430701125065,0,0,0.215915916102139,0,15.7148933775435,49.6672876116305,1.52925763827023,1.66215201785745,0.895499018888713,0,0,2.56450125116389,1.64007322849853,2.27764876265012,13.6014135374993,0,0,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0,0,1.15699440752685,1.15314040419064,0.510450849978337,0.708104465988849,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0.632758849437452,0.38126038784765,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0.670302275535787,1.08890984861323,14.3098577180704,2.15252686335615,0,5.32116184244011,1.37834040124176,0.507447609232169,0,0,0.238231775457789,0,0,0.540031437238115,0,0.320472213382419,0,8.33136734335508,0,0,0,8.92787127281405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,8.42132431836989,0,1.8204078262427,0,0.568272293612826,3.58116727106535,0.296964680832639,3.99308912729002,2.98244294329889,11.9569003948936,0,0,1.68900326502395,6.5751836122853,6.63081397274754,0,1.02268682502155,0,0,0.539210106883961,42.4280183981194,0,0.493217028184668,0,0,9.69332746095218,2.87581104301739,3.99227596002388,5.98983850496036,29.036719998737,0.724999575434793,2.50345586228099,21.1030529742996,8.98273190718158,0.689486746482929,2.91604613383254,0.347249989866585,7.97167247232455,30.3903025336028,1.52581736317083,0.331737779793674,0,4.8264787373874,0,3.62501735124369,2.6163087891291,0.227884111694002,4.6112780877612,0.718061155278177,1.19512109114209,2.23300811812344,0.732780747214898,2.66517388009317,0,0,0.166211681900156,4.06072189110925,2.74487548044835,2.18168063068596,8.53891797258833,0.476809736941136,16.4578490331861,12.0792278037769,0.989471500037586,0.649165919226273,34.8341675877477,14.860870836561,37.8838689858848,0,0.247127877893006,0.313265848516366,2.3590396543237,0,3.04543779442941,0,4.89161547330224,1.69946265673865,0,44.7665649380056,1.53036380815245,1.32691817219825,0,0.207376382794494,13.9577313268509,0.992975867626496,10.3597863074384,11.9472429772959,11.3843818411917,1.10939738410511,7.46306874841063,11.7590876897253,2.00236175134926,1.92199335066233,0,0.774050650312681,0.730893170861856,0.903270027585302,6.11030803877042,1.1473296469895,2.71176888936639,0.137041924646751,0,5.50803924816145,7.43095254392251,4.80952921509202,61.2610094901942,2.19790570540343,14.5531321325647,0.687219576995494,0,0.432164393964449,0.745515213392595,5.89235086541989,0,0,1.01998217636322,0.288950589901519,3.60252173225874,2.46429682005587,0,0,0,0,0.458320848023367,0.717873024576814,3.194864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| |||
|short_description=p2@RAP1GAP | |||
}} |
Revision as of 16:54, 10 January 2014
Short description: | p2@RAP1GAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAP1GAP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374763, uc001bez.1_5end |
EntrezGene: | RAP1GAP |
HGNC: | 9858 |
UniProt: | P47736Q5T3T1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.01e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.21e-15 | 106 |
cell type cancer | 6.57e-12 | 143 |
adenocarcinoma | 1.15e-09 | 25 |