FFCP PHASE1:Hg19::chr1:209796354..209796366,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C571 | |||
|description=CAGE_peak_at_chr1:209796354..209796366,- | |||
|id=chr1:209796354..209796366,- | |||
|ontology_enrichment_celltype=CL:0002076!6.51e-28!43;CL:0000066!3.28e-23!254;CL:0000223!4.03e-18!59;CL:0002159!2.77e-15!13;CL:0002251!5.54e-13!21;CL:0002368!1.18e-12!13;CL:0000244!6.22e-10!4;CL:0000731!6.22e-10!4;CL:0000063!2.08e-08!578;CL:0002077!4.24e-08!33;CL:0002328!7.12e-08!3;CL:0002621!2.31e-07!3;CL:0002166!2.52e-07!3;CL:0002231!4.68e-07!3;CL:0000362!8.34e-07!8;CL:0000076!9.61e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000244;5.09e-33;4!CL:0000731;5.09e-33;4!CL:0002328;4.55e-25;3!CL:0002368;1.68e-15;13!CL:0002202;1.34e-14;9!CL:0002632;1.34e-14;9!CL:0002159;2.75e-14;14!CL:0002231;8.13e-12;3!CL:0002076;9.75e-12;42!CL:0002621;1.87e-11;3!CL:0002327;8.20e-09;4!CL:0000362;1.24e-08;9!CL:0000312;2.43e-07;5!CL:0002077;4.06e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,6.81e-33,4;CL:0000731,6.81e-33,4;CL:0002328,3.57e-25,3;CL:0002368,1.76e-15,13;CL:0002202,1.49e-14,9;CL:0002632,1.49e-14,9;CL:0002076,3.29e-14,42;CL:0002159,3.50e-14,14;CL:0002231,6.04e-12,3;CL:0000066,9.82e-12,253;CL:0002621,1.97e-11,3;CL:0000223,6.37e-10,58;CL:0002327,7.58e-09,4;CL:0000362,1.38e-08,9;CL:0002077,4.96e-08,34;CL:0000312,2.76e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.52e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.25e-09;1!DOID:3149;3.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.72e-09,1;DOID:3149,5.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.89e-12!169;UBERON:0000925!4.89e-12!169;UBERON:0006595!4.89e-12!169;UBERON:0000365!3.29e-11!5;UBERON:0005910!3.03e-09!6;UBERON:0001004!9.09e-09!72;UBERON:0004815!7.12e-08!3;UBERON:0002031!7.12e-08!3;UBERON:0006554!9.41e-08!44;UBERON:0000161!1.14e-07!35;UBERON:0001008!1.70e-07!45;UBERON:0001949!2.31e-07!3;UBERON:0003102!3.18e-07!95;UBERON:0001007!5.59e-07!155;UBERON:0001555!5.59e-07!155;UBERON:0007026!5.59e-07!155;UBERON:0000065!7.42e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.76e-26;5!UBERON:0004815;4.55e-25;3!UBERON:0002031;4.55e-25;3!UBERON:0000486;8.60e-24;12!UBERON:0005910;4.06e-22;6!UBERON:0002185;2.73e-15;5!UBERON:0005911;6.96e-14;36!UBERON:0001949;1.87e-11;3!UBERON:0000485;4.47e-11;7!UBERON:0004807;5.35e-09;22!UBERON:0007196;7.93e-09;15!UBERON:0001558;7.93e-09;15!UBERON:0001911;8.20e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.21e-26,5;UBERON:0004815,3.57e-25,3;UBERON:0002031,3.57e-25,3;UBERON:0005910,4.92e-22,6;UBERON:0002185,2.37e-15,5;UBERON:0001949,1.97e-11,3;UBERON:0005911,4.15e-10,82;UBERON:0005153,5.75e-10,37;UBERON:0005157,6.57e-10,47;UBERON:0001911,7.58e-09,4;UBERON:0005333,7.58e-09,4;UBERON:0008425,7.58e-09,4;UBERON:0005311,7.58e-09,4;UBERON:0007196,8.45e-09,15;UBERON:0001558,8.45e-09,15;UBERON:0000485,9.31e-09,9;UBERON:0006554,9.83e-08,47;UBERON:0001008,1.48e-07,48;UBERON:0004807,4.88e-07,28 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,1.50602959389125,9.61360426433648,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.918251677112708,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.548751427043128,2.24803506515239,1.10581869652794,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,3.19166043577833,0.425325291727159,0.895585227028483,1.16253575405585,1.53353071666084,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,5.61418116849198,1.56537681191024,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.764628819135115,1.66215201785745,0,0,0,0,0,0,0,0,0,0.574265537996172,2.60024098414608,0,0,0,0,0,0,0,0,0,3.8015530533025,0.768760269460425,0.638063562472921,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0,1.08890984861323,0,3.44404298136984,5.05414427002877,3.10401107475673,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,1.27600463892768,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0,0,0,0,0,0.164230914106418,0.0969890164884194,0,0,0.411125773940253,0,0,0,0,0,0.19980960958213,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.699397538597222,1.86623178009892,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0.401206833445841,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:209796354..209796366,- | |||
}} |
Revision as of 23:58, 10 January 2014
Short description: | p@chr1:209796354..209796366, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209796354..209796366, - |
Coexpression cluster: | C571_Bronchial_Prostate_Small_Tracheal_Mallassezderived_Urothelial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 6.81e-33 | 4 |
urothelial cell | 6.81e-33 | 4 |
bronchial epithelial cell | 3.57e-25 | 3 |
respiratory epithelial cell | 1.76e-15 | 13 |
epithelial cell of tracheobronchial tree | 1.49e-14 | 9 |
epithelial cell of lower respiratory tract | 1.49e-14 | 9 |
endo-epithelial cell | 3.29e-14 | 42 |
general ecto-epithelial cell | 3.50e-14 | 14 |
epithelial cell of prostate | 6.04e-12 | 3 |
epithelial cell | 9.82e-12 | 253 |
gingival epithelial cell | 1.97e-11 | 3 |
endodermal cell | 6.37e-10 | 58 |
mammary gland epithelial cell | 7.58e-09 | 4 |
epidermal cell | 1.38e-08 | 9 |
ecto-epithelial cell | 4.96e-08 | 34 |
keratinocyte | 2.76e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.21e-26 | 5 |
lower respiratory tract epithelium | 3.57e-25 | 3 |
epithelium of bronchus | 3.57e-25 | 3 |
transitional epithelium | 4.92e-22 | 6 |
bronchus | 2.37e-15 | 5 |
gingival epithelium | 1.97e-11 | 3 |
endo-epithelium | 4.15e-10 | 82 |
epithelial bud | 5.75e-10 | 37 |
epithelial fold | 6.57e-10 | 47 |
mammary gland | 7.58e-09 | 4 |
mammary bud | 7.58e-09 | 4 |
mammary ridge | 7.58e-09 | 4 |
mammary placode | 7.58e-09 | 4 |
tracheobronchial tree | 8.45e-09 | 15 |
lower respiratory tract | 8.45e-09 | 15 |
simple columnar epithelium | 9.31e-09 | 9 |
urinary system structure | 9.83e-08 | 47 |
renal system | 1.48e-07 | 48 |
respiratory system epithelium | 4.88e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.72e-09 | 1 |
keratoacanthoma | 5.72e-09 | 1 |