FFCP PHASE1:Hg19::chr1:209788292..209788321,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_at_chr1:209788292..209788321,- | |||
|id=chr1:209788292..209788321,- | |||
|ontology_enrichment_celltype=CL:0002076!2.22e-22!43;CL:0000066!1.06e-20!254;CL:0000223!3.76e-15!59;CL:0002368!4.06e-09!13;CL:0002251!6.45e-09!21;CL:0002159!1.72e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002621;9.40e-23;3!CL:0000240;1.15e-19;6!CL:0000311;1.15e-19;6!CL:0000079;1.15e-19;6!CL:0000237;1.15e-19;6!CL:0002159;5.84e-18;14!CL:0000575;7.07e-15;2!CL:0000312;6.21e-14;5!CL:0002076;3.40e-12;42!CL:0002077;2.48e-10;34!CL:0002231;3.16e-10;3!CL:0002327;2.51e-08;4!CL:0002336;2.74e-08;1!CL:0002261;2.74e-08;1!CL:0002170;2.74e-08;1!CL:0000362;5.93e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.09e-22,3;CL:0000240,1.15e-19,6;CL:0000311,1.15e-19,6;CL:0000079,1.15e-19,6;CL:0000237,1.15e-19,6;CL:0000036,1.15e-19,6;CL:0000357,1.15e-19,6;CL:0000114,1.15e-19,6;CL:0002159,7.43e-18,14;CL:0000575,8.76e-15,2;CL:0000312,6.64e-14,5;CL:0002076,1.75e-12,42;CL:0002077,2.99e-12,34;CL:0000066,3.88e-12,253;CL:0002231,3.01e-10,3;CL:0000223,1.17e-08,58;CL:0002336,2.46e-08,1;CL:0002261,2.46e-08,1;CL:0002170,2.46e-08,1;CL:0002327,2.47e-08,4;CL:0000362,6.14e-08,9;CL:0000221,6.87e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000357;1.15e-19;6!CL:0000114;1.15e-19;6 | |||
|ontology_enrichment_disease=DOID:305!1.88e-10!106;DOID:0050687!1.34e-08!143;DOID:1749!1.07e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.31e-08!169;UBERON:0000925!8.31e-08!169;UBERON:0006595!8.31e-08!169;UBERON:0005911!1.62e-07!82;UBERON:0005910!7.82e-07!6;UBERON:0000344!9.83e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;9.40e-23;3!UBERON:0003929;4.61e-10;7!UBERON:0000486;4.61e-10;12!UBERON:0003729;3.83e-09;13!UBERON:0003350;7.29e-09;8!UBERON:0001828;7.29e-09;8!UBERON:0001911;2.51e-08;4!UBERON:0010371;4.01e-08;31!UBERON:0000964;6.94e-08;4!UBERON:0010409;6.94e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.09e-22,3;UBERON:0003729,3.87e-09,13;UBERON:0003350,7.70e-09,8;UBERON:0001828,7.70e-09,8;UBERON:0001911,2.47e-08,4;UBERON:0005333,2.47e-08,4;UBERON:0008425,2.47e-08,4;UBERON:0005311,2.47e-08,4;UBERON:0003102,3.42e-08,99;UBERON:0000964,7.72e-08,4;UBERON:0010409,7.72e-08,4;UBERON:0004348,7.72e-08,4;UBERON:0005427,7.72e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,2.40285509343189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0.863077176966451,0,0,0.689491361473237,0,0,0.188242339542605,0,0.224723484445085,1.22433556948361,0.320929027076094,0,0,0.398927315243264,0,1.16083695451434,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.11235332835329,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,5.60456474173561,3.00020732649918,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,12.7310331074006,2.24803506515239,3.41798506199545,1.38882667737794,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,1.17587489739202,0.141775097242386,5.64218693027944,2.3250715081117,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,1.20303882181971,1.65745780084613,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0,0,0,4.13212288402445,0.576570202095319,2.16941611240793,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,2.88666338176536,0,0,0.188287601553558,4.73555909938353,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,0,0.614321404198464,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0.0769502585037971,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0.416024019039416,0.173559738335131,0.195984794828755,0.0870592065804026,0,0,0.0967563312890851,0.219267951258557,0,0,0,0,0.548167698587004,0,0,4.10657903743086,0.160317640503067,0,0,0.432271251462318,0,0,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,6.38341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0.172214979660816,0,0,0.279759015438889,1.24415452006595,0,0,0.314531883711793,0,0,0,0.619678821295011,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.392590874004102,0.235939446695481,0,0.462102664601353,0,0,0.198916222116275,0,0,0,0,0,0.295712172434091,0,0.781078098613847,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0.590969204419841,0.889851215136553,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0.111855431797792,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,1.78553938605658,0,0.962896400270019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0.533636729388577,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:209788292..209788321,- | |||
}} |
Revision as of 23:57, 10 January 2014
Short description: | p@chr1:209788292..209788321, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209788292..209788321, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.09e-22 | 3 |
stratified squamous epithelial cell | 1.15e-19 | 6 |
keratin accumulating cell | 1.15e-19 | 6 |
stratified epithelial cell | 1.15e-19 | 6 |
keratinizing barrier epithelial cell | 1.15e-19 | 6 |
epithelial fate stem cell | 1.15e-19 | 6 |
stratified epithelial stem cell | 1.15e-19 | 6 |
surface ectodermal cell | 1.15e-19 | 6 |
general ecto-epithelial cell | 7.43e-18 | 14 |
corneal epithelial cell | 8.76e-15 | 2 |
keratinocyte | 6.64e-14 | 5 |
endo-epithelial cell | 1.75e-12 | 42 |
ecto-epithelial cell | 2.99e-12 | 34 |
epithelial cell | 3.88e-12 | 253 |
epithelial cell of prostate | 3.01e-10 | 3 |
endodermal cell | 1.17e-08 | 58 |
buccal mucosa cell | 2.46e-08 | 1 |
endothelial cell of viscerocranial mucosa | 2.46e-08 | 1 |
keratinized cell of the oral mucosa | 2.46e-08 | 1 |
mammary gland epithelial cell | 2.47e-08 | 4 |
epidermal cell | 6.14e-08 | 9 |
ectodermal cell | 6.87e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.09e-22 | 3 |
mouth mucosa | 3.87e-09 | 13 |
epithelium of mucosa | 7.70e-09 | 8 |
gingiva | 7.70e-09 | 8 |
mammary gland | 2.47e-08 | 4 |
mammary bud | 2.47e-08 | 4 |
mammary ridge | 2.47e-08 | 4 |
mammary placode | 2.47e-08 | 4 |
surface structure | 3.42e-08 | 99 |
cornea | 7.72e-08 | 4 |
eye surface | 7.72e-08 | 4 |
optic eminence | 7.72e-08 | 4 |
corneal primordium | 7.72e-08 | 4 |