FFCP PHASE1:Hg19::chr1:203148455..203148477,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1116 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1932 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=133bp_to_uc001gzl.3_5end | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_5_at_CHI3L1_5end | |||
|id=chr1:203148455..203148477,- | |||
|ontology_enrichment_celltype=CL:0000153!4.43e-12!9;CL:0000447!4.43e-12!9;CL:0000667!8.92e-10!6;CL:0000058!8.92e-10!6;CL:0000138!8.92e-10!6;CL:0000499!9.93e-08!27;CL:0000135!1.11e-07!3;CL:0000386!1.11e-07!3;CL:0000388!1.11e-07!3;CL:0000327!2.97e-07!14;CL:0000775!3.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.37e-35;9!CL:0000447;1.37e-35;9!CL:0000138;1.06e-27;6!CL:0000327;4.89e-21;15!CL:0000499;5.56e-18;28!CL:0000235;1.59e-10;6!CL:0002540;1.70e-10;6!CL:0000135;4.11e-10;3!CL:0000388;4.11e-10;3!CL:0000214;5.86e-10;3!CL:0000775;2.40e-09;3!CL:0000151;1.29e-08;36!CL:0000094;1.16e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.44e-35,9;CL:0000447,1.44e-35,9;CL:0000058,1.09e-27,6;CL:0000138,1.09e-27,6;CL:0000327,5.04e-21,15;CL:0000499,5.62e-18,28;CL:0000151,1.22e-10,36;CL:0000235,1.59e-10,6;CL:0002540,1.59e-10,6;CL:0000135,4.02e-10,3;CL:0000388,4.02e-10,3;CL:0000214,5.99e-10,3;CL:0000775,2.30e-09,3;CL:0000094,1.12e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.26e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;8.23e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,9.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!1.11e-07!3;UBERON:0007023!2.39e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.11e-10;3!UBERON:0000043;4.11e-10;3!UBERON:0007845;4.11e-10;3!UBERON:0006915;5.86e-10;3!UBERON:0007616;5.86e-10;3!UBERON:0002217;5.86e-10;3!UBERON:0002018;5.86e-10;3!UBERON:0001282;1.00e-07;1!UBERON:0009842;1.00e-07;1!UBERON:0003704;1.00e-07;1!UBERON:0001171;1.00e-07;1!UBERON:0001172;1.00e-07;1!UBERON:0002363;1.26e-07;1!UBERON:0001301;1.75e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.02e-10,3;UBERON:0000043,4.02e-10,3;UBERON:0007845,4.02e-10,3;UBERON:0006915,5.99e-10,3;UBERON:0007616,5.99e-10,3;UBERON:0002217,5.99e-10,3;UBERON:0002018,5.99e-10,3;UBERON:0001282,1.04e-07,1;UBERON:0009842,1.04e-07,1;UBERON:0003704,1.04e-07,1;UBERON:0001171,1.04e-07,1;UBERON:0001172,1.04e-07,1;UBERON:0002363,1.18e-07,1;UBERON:0007645,1.18e-07,1;UBERON:0007647,1.18e-07,1;UBERON:0010115,1.18e-07,1;UBERON:0001301,1.99e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3372698286148,8.52274448081012,11.8774145547875,15.1104329939709,9.73269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89696330006576,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,7.72214074959484,5.49935300468294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0.502257091432126,10.5416969741516,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,2.99161459204025,2.07207756718018,0.12269149171914,0.500170521059677,0,0,0,0,0,0.902838299183157,9.09630016223939,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.290033387828457,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,17.9441490003015,7.57378253807774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53620382154229,0.671028323677248,0.834245708559542,0.19538809540204,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0.0769502585037971,3.76008784295104,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52746318513952,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0,0,0,12.7500443299932,0,0,0.26446520348538,0,0,0.213574825135389,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.665574309221114,0.0620964029413835,0,0,0,0,0,0,0,0,0,1.66441758450784,4.54567212660214,24.1505185682472,4.44905610798268,0,0.604923695052956,0,0,0,0.449803112163605,0,0,0,0,0.751288044986092,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,1.75427239662966,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.826747186004736,0,0,0,0,0,0,0,0,0,1.13831095675649,0.0887023701626388,0,4.11571222649804,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0.801711364730253,2.07216164163037,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.821302454849976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,11.903840581336,70.2506955519756,0.865253124247578,0,0,0,0,0,0,0,0.454672189309436,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@CHI3L1 | |||
}} |
Revision as of 23:28, 10 January 2014
Short description: | p5@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | 133bp_to_uc001gzl.3_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.44e-35 | 9 |
carbohydrate secreting cell | 1.44e-35 | 9 |
chondroblast | 1.09e-27 | 6 |
chondrocyte | 1.09e-27 | 6 |
extracellular matrix secreting cell | 5.04e-21 | 15 |
stromal cell | 5.62e-18 | 28 |
secretory cell | 1.22e-10 | 36 |
macrophage | 1.59e-10 | 6 |
mesenchymal stem cell of the bone marrow | 1.59e-10 | 6 |
fibrocyte | 4.02e-10 | 3 |
tendon cell | 4.02e-10 | 3 |
synovial cell | 5.99e-10 | 3 |
neutrophil | 2.30e-09 | 3 |
granulocyte | 1.12e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.02e-10 | 3 |
tendon | 4.02e-10 | 3 |
regular connective tissue | 4.02e-10 | 3 |
stratified squamous epithelium | 5.99e-10 | 3 |
layer of synovial tissue | 5.99e-10 | 3 |
synovial joint | 5.99e-10 | 3 |
synovial membrane of synovial joint | 5.99e-10 | 3 |
intralobular bile duct | 1.04e-07 | 1 |
acinus | 1.04e-07 | 1 |
intrahepatic bile duct | 1.04e-07 | 1 |
portal lobule | 1.04e-07 | 1 |
hepatic acinus | 1.04e-07 | 1 |
dura mater | 1.18e-07 | 1 |
future meninx | 1.18e-07 | 1 |
ectomeninx | 1.18e-07 | 1 |
future dura mater | 1.18e-07 | 1 |
epididymis | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 9.10e-08 | 1 |