FFCP PHASE1:Hg19::chr1:183560016..183560033,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |||
|TSSclassifier=strong | |||
|UniProt=P19878 | |||
|association_with_transcript=-5bp_to_ENST00000367536_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_NCF2_5end | |||
|id=chr1:183560016..183560033,- | |||
|ontology_enrichment_celltype=CL:0000766!1.30e-58!76;CL:0002194!4.00e-58!63;CL:0000576!4.00e-58!63;CL:0000040!4.00e-58!63;CL:0000559!4.00e-58!63;CL:0002009!1.11e-57!65;CL:0000763!3.88e-56!112;CL:0000049!3.88e-56!112;CL:0000037!3.19e-55!172;CL:0000566!3.19e-55!172;CL:0000738!4.49e-55!140;CL:0000988!8.45e-54!182;CL:0002032!3.00e-53!165;CL:0000837!3.00e-53!165;CL:0000557!7.48e-51!71;CL:0002057!1.20e-50!42;CL:0002087!3.75e-50!119;CL:0000839!4.95e-50!70;CL:0000860!4.66e-46!45;CL:0002031!9.64e-44!124;CL:0002393!1.22e-10!9;CL:0002397!1.22e-10!9;CL:0000134!1.45e-10!358;CL:0002320!8.01e-10!365;CL:0000219!2.63e-07!390;CL:0000094!2.67e-07!8;CL:0000990!4.87e-07!8;CL:0000451!7.58e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.74e-68;33!CL:0002057;8.74e-68;33!CL:0000473;2.37e-66;39!CL:0000234;2.37e-66;39!CL:0000576;1.05e-57;48!CL:0000766;2.34e-45;69!CL:0000763;9.41e-23;100!CL:0002087;4.62e-20;104!CL:0000738;4.66e-18;136!CL:0000235;3.94e-13;6!CL:0002393;4.90e-13;6!CL:0002397;4.90e-13;6!CL:0000094;2.05e-12;8!CL:0000988;1.75e-10;177!CL:0000081;1.01e-08;11!CL:0000219;2.77e-07;193!CL:0000775;2.92e-07;3!CL:0002619;3.19e-07;3!CL:0000226;7.20e-07;3!CL:0000842;7.20e-07;3!CL:0000767;7.60e-07;3!CL:0000875;8.35e-07;3!CL:0002396;8.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.12e-106,72;CL:0000473,1.82e-104,48;CL:0000234,1.82e-104,48;CL:0002194,1.33e-103,59;CL:0000576,1.33e-103,59;CL:0000040,1.33e-103,59;CL:0000559,1.33e-103,59;CL:0002009,9.79e-100,61;CL:0000860,4.12e-92,42;CL:0002057,4.12e-92,42;CL:0000839,4.42e-91,66;CL:0000557,1.67e-89,67;CL:0000738,1.31e-75,136;CL:0000763,4.64e-75,108;CL:0000049,4.64e-75,108;CL:0002087,4.12e-74,115;CL:0000037,6.03e-65,168;CL:0002031,2.00e-63,120;CL:0002032,1.44e-62,161;CL:0000837,1.44e-62,161;CL:0000988,1.16e-60,177;CL:0000134,1.31e-20,354;CL:0002320,7.80e-20,361;CL:0002393,3.31e-18,9;CL:0002397,3.31e-18,9;CL:0000219,4.13e-17,386;CL:0000034,4.58e-14,441;CL:0000723,5.36e-14,433;CL:0000048,8.52e-14,427;CL:0000235,3.86e-13,6;CL:0000094,1.68e-12,8;CL:0000081,8.74e-09,11;CL:0000775,2.89e-07,3;CL:0002619,3.15e-07,3;CL:0000767,6.15e-07,3;CL:0000226,7.60e-07,3;CL:0000842,7.60e-07,3;CL:0000875,8.27e-07,3;CL:0002396,8.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-65;42!CL:0000049;4.07e-23;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.36e-58!102;UBERON:0003061!4.36e-58!102;UBERON:0002193!3.86e-53!112;UBERON:0002371!5.89e-44!80;UBERON:0001474!2.73e-39!86;UBERON:0004765!1.37e-33!101;UBERON:0001434!1.37e-33!101;UBERON:0002405!3.66e-31!115;UBERON:0003081!1.08e-15!216;UBERON:0002204!1.28e-13!167;UBERON:0000178!2.89e-12!15;UBERON:0000179!2.89e-12!15;UBERON:0000463!2.89e-12!15;UBERON:0002384!3.38e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.73e-14;15!UBERON:0000179;5.73e-14;15!UBERON:0000463;5.73e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-86,98;UBERON:0003061,1.05e-86,98;UBERON:0002193,1.54e-79,108;UBERON:0002371,3.77e-77,76;UBERON:0001474,2.09e-70,82;UBERON:0002405,4.05e-65,93;UBERON:0004765,8.40e-63,90;UBERON:0001434,5.35e-55,100;UBERON:0003081,8.81e-33,203;UBERON:0002204,8.11e-27,167;UBERON:0002384,8.87e-19,371;UBERON:0000926,5.23e-15,315;UBERON:0004120,5.23e-15,315;UBERON:0006603,5.23e-15,315;UBERON:0000178,6.52e-14,15;UBERON:0000179,6.52e-14,15;UBERON:0000463,6.52e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3158097759734,9.76997014454354,11.2556417278561,6.68719270643137,2.68680578668049,3.8704030829019,0,0.6024118375565,0,0,0.142169232487422,0,9.97191735357379,11.0299446108578,9.76548918221333,6.94137970143765,6.47787332037959,6.43938919085466,23.699912921069,23.806184452395,16.2531320995837,28.3563425024935,32.4822631537242,21.060033220867,32.7969327247252,27.4091955986138,20.5739540003069,42.7484644113407,46.4748972180355,17.6054432572644,25.224473498709,33.567456457115,23.3712423822888,33.9753120531702,32.4138317346855,22.3767994029664,20.7806319117631,23.9356389145958,16.1965405202424,57.4614292484596,53.9015963456583,41.1062684337079,25.8786125214446,28.1600775946909,15.2032191293582,50.853558221203,64.0803086618363,35.7602497808199,7.81644559354185,3.82687739937078,4.82214884669265,8.08766144254765,9.91167492753942,7.55410257476277,3.99017841237748,3.58050018958362,3.10529061399878,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,3.36305137788922,0.263384084775077,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.947109008176067,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,6.16640047943898,9.0547463395619,11.5673425651413,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.219500570817251,2.24803506515239,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,4.92434012174795,7.25413221931637,11.4445994962321,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,5.52482800575339,10.5416969741516,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.898401253958239,0,0,0,0.167516265334349,0,5.24304916763028,8.97484377612075,6.63064821497657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,3.45142721309787,4.37582986994122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0.384380134730212,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,2.17781969722645,0.941438007767792,0,0,0,0,2.02979043692868,3.82318603571188,5.69647187174163,1.19115887728894,1.23408681925858,2.59389324477087,2.16012574895246,2.37937552888281,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0.766021480529467,0.211673582723883,0.649243880549111,1.12318871245384,0.456469358066384,0.156679895773023,2.50634477090067,0,0.481764225311099,0.201799707191048,0.425846237690326,1.71752672377882,0.307240764308458,0.223676107892416,0.333698283423817,2.14926904942244,0,0,0,0,0,0,0.293016358543788,0,2.563197838382,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,2.33861130376032,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0.889563386041866,0.247127877893006,0.313265848516366,0,0,0,0,0.391329237864179,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38693328263138,0,0,0,0,0,0.674921674654501,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38823636338003,0.471612915298998,1.65695622138878,1.48849806543585,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,0.654261577023377,0,0,0.422624246717254,1.19992437512958,0.213383459388282,0.172214979660816,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,1.84374380089247,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.563903507879121,0.386747327841463,4.09758739292209,0,0.705789743431384,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.434523000071005,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.358611026963382,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,1.60284246151616 | |||
|short_description=p8@NCF2 | |||
}} |
Revision as of 22:43, 10 January 2014
Short description: | p8@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NCF2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -5bp_to_ENST00000367536_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | P19878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-86 | 98 |
blood island | 1.05e-86 | 98 |
hemolymphoid system | 1.54e-79 | 108 |
bone marrow | 3.77e-77 | 76 |
bone element | 2.09e-70 | 82 |
immune system | 4.05e-65 | 93 |
skeletal element | 8.40e-63 | 90 |
skeletal system | 5.35e-55 | 100 |
lateral plate mesoderm | 8.81e-33 | 203 |
musculoskeletal system | 8.11e-27 | 167 |
connective tissue | 8.87e-19 | 371 |
mesoderm | 5.23e-15 | 315 |
mesoderm-derived structure | 5.23e-15 | 315 |
presumptive mesoderm | 5.23e-15 | 315 |
blood | 6.52e-14 | 15 |
haemolymphatic fluid | 6.52e-14 | 15 |
organism substance | 6.52e-14 | 15 |