FFCP PHASE1:Hg19::chr1:156084564..156084580,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6636 | |||
|TSSclassifier=strong | |||
|UniProt=Q3BDU5 | |||
|association_with_transcript=-11bp_to_ENST00000392355_5end | |||
|coexpression_cluster_id=C1839 | |||
|description=CAGE_peak_2_at_LMNA_5end | |||
|id=chr1:156084564..156084580,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.05e-34!682;CL:0000548!1.69e-34!679;CL:0000004!1.69e-34!679;CL:0000255!1.69e-34!679;CL:0000144!2.18e-33!625;CL:0002371!6.50e-33!591;CL:0000055!1.47e-29!180;CL:0000222!2.43e-21!119;CL:0000003!3.85e-18!722;CL:0000057!6.66e-18!75;CL:0000220!2.69e-17!246;CL:0002321!1.80e-16!248;CL:0000183!5.97e-16!59;CL:0000680!1.34e-15!57;CL:0000056!1.34e-15!57;CL:0000355!1.34e-15!57;CL:0000187!9.08e-15!54;CL:0000063!1.84e-14!578;CL:0000192!1.54e-13!42;CL:0000514!1.54e-13!42;CL:0000723!1.00e-11!436;CL:0000048!1.69e-11!430;CL:0000393!2.44e-11!60;CL:0000211!2.44e-11!60;CL:0000359!2.66e-11!32;CL:0000034!1.50e-10!444;CL:0002620!3.54e-09!23;CL:0000213!9.23e-07!57;CL:0000215!9.23e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.72e-11;32!CL:0000192;1.48e-10;43!CL:0002620;3.36e-09;23!CL:0000187;7.06e-09;55!CL:0000057;2.78e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.30e-22,121;CL:0000057,1.11e-17,76;CL:0002321,3.25e-17,250;CL:0000680,5.02e-16,58;CL:0000056,5.02e-16,58;CL:0000355,5.02e-16,58;CL:0000187,3.43e-15,55;CL:0000192,5.82e-14,43;CL:0000514,5.82e-14,43;CL:0000723,2.70e-12,433;CL:0000048,4.89e-12,427;CL:0000393,1.01e-11,61;CL:0000211,1.01e-11,61;CL:0000359,2.55e-11,32;CL:0000034,4.43e-11,441;CL:0002620,3.42e-09,23;CL:0000213,5.10e-07,58;CL:0000215,5.10e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.48e-10;43!CL:0000355;4.69e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.75e-20!83;UBERON:0002329!9.75e-20!83;UBERON:0003077!9.75e-20!83;UBERON:0003059!9.75e-20!83;UBERON:0007282!9.75e-20!83;UBERON:0009618!9.75e-20!83;UBERON:0007285!9.75e-20!83;UBERON:0000486!4.81e-19!82;UBERON:0000926!5.80e-19!448;UBERON:0004120!5.80e-19!448;UBERON:0006603!5.80e-19!448;UBERON:0004290!4.48e-18!70;UBERON:0001637!4.87e-16!42;UBERON:0003509!4.87e-16!42;UBERON:0004572!4.87e-16!42;UBERON:0002204!5.46e-15!167;UBERON:0001981!2.70e-14!60;UBERON:0007500!2.70e-14!60;UBERON:0004537!2.70e-14!60;UBERON:0006965!2.70e-14!60;UBERON:0001134!2.97e-14!61;UBERON:0002036!2.97e-14!61;UBERON:0003082!2.97e-14!61;UBERON:0005256!3.20e-14!143;UBERON:0002049!7.61e-14!79;UBERON:0007798!7.61e-14!79;UBERON:0004872!1.36e-13!84;UBERON:0000055!1.57e-13!69;UBERON:0002385!1.72e-13!63;UBERON:0001015!1.72e-13!63;UBERON:0000383!1.72e-13!63;UBERON:0004573!1.96e-12!33;UBERON:0004571!1.96e-12!33;UBERON:0003914!6.61e-12!118;UBERON:0003102!8.77e-12!95;UBERON:0003081!3.76e-11!216;UBERON:0002100!4.56e-11!216;UBERON:0002199!1.07e-10!45;UBERON:0002416!1.07e-10!45;UBERON:0003104!2.62e-10!238;UBERON:0009142!2.62e-10!238;UBERON:0000468!1.09e-09!659;UBERON:0000490!1.91e-09!138;UBERON:0002097!2.45e-09!40;UBERON:0000467!2.45e-09!625;UBERON:0000480!4.02e-09!626;UBERON:0004535!2.99e-08!110;UBERON:0001009!8.48e-08!113;UBERON:0000947!2.32e-07!21;UBERON:0010191!2.32e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.27e-11;42!UBERON:0003509;1.27e-11;42!UBERON:0004572;1.27e-11;42!UBERON:0004573;3.38e-11;33!UBERON:0004571;3.38e-11;33!UBERON:0007500;1.90e-09;56!UBERON:0001981;1.90e-09;56!UBERON:0004537;1.90e-09;56!UBERON:0003102;2.38e-08;50!UBERON:0002097;6.76e-08;41!UBERON:0002199;9.15e-08;46!UBERON:0002416;9.15e-08;46!UBERON:0003914;2.23e-07;74!UBERON:0000947;2.44e-07;21!UBERON:0010191;2.44e-07;21!UBERON:0000055;3.00e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.58e-20,78;UBERON:0000486,1.77e-19,83;UBERON:0002329,1.64e-18,71;UBERON:0003059,1.64e-18,71;UBERON:0007282,1.64e-18,71;UBERON:0004290,1.64e-18,71;UBERON:0009618,1.64e-18,71;UBERON:0007524,5.92e-18,73;UBERON:0003077,1.04e-17,72;UBERON:0007285,1.04e-17,72;UBERON:0000926,3.30e-17,315;UBERON:0004120,3.30e-17,315;UBERON:0006603,3.30e-17,315;UBERON:0001637,4.57e-16,42;UBERON:0003509,4.57e-16,42;UBERON:0004572,4.57e-16,42;UBERON:0002204,6.22e-16,167;UBERON:0001134,1.15e-14,62;UBERON:0002036,1.15e-14,62;UBERON:0003082,1.15e-14,62;UBERON:0007500,1.40e-14,59;UBERON:0001981,1.40e-14,59;UBERON:0004537,1.40e-14,59;UBERON:0006965,1.40e-14,59;UBERON:0002049,4.62e-14,78;UBERON:0007798,4.62e-14,78;UBERON:0002385,6.80e-14,64;UBERON:0001015,6.80e-14,64;UBERON:0000383,6.80e-14,64;UBERON:0004872,8.52e-14,83;UBERON:0000055,9.07e-14,68;UBERON:0000490,1.72e-12,148;UBERON:0004573,1.87e-12,33;UBERON:0004571,1.87e-12,33;UBERON:0003102,2.19e-12,99;UBERON:0005256,1.13e-11,122;UBERON:0003914,1.19e-11,117;UBERON:0002199,2.73e-11,46;UBERON:0002416,2.73e-11,46;UBERON:0003104,3.00e-10,160;UBERON:0009142,3.00e-10,160;UBERON:0003081,4.27e-10,203;UBERON:0002100,5.51e-10,199;UBERON:0002097,6.45e-10,41;UBERON:0004535,3.37e-08,109;UBERON:0001009,9.59e-08,112;UBERON:0000947,2.26e-07,21;UBERON:0010191,2.26e-07,21 | |||
|phase1_expression=29.0685406832891,23.1228565802262,20.2974341898198,24.0175916047513,23.6889380046463,29.6595098194125,32.9289841618804,48.0107103804391,36.5659879479774,21.3788524756313,80.2471343168292,35.6059436572181,47.7418230593501,39.4814665942549,60.3143223824807,22.1867298329086,23.5050865929351,32.8639540674318,27.8121695310589,25.2398169057415,53.6521817972385,14.7323719094701,2.86235987131057,14.3718146326528,8.41135685285179,1.98674854944673,1.55991119954897,1.41679406364623,33.0425992553079,23.7974226820272,40.716640432128,66.1983281624828,61.1448015119848,53.984085484351,0,0,1.17440175733939,13.8498852132969,18.450089167253,29.5134784173558,2.68698569087909,4.53451132426571,2.57575567634187,40.1299139031599,32.8752071009264,40.7541222795531,41.1399395323062,43.5837961303135,37.4744708783075,17.261543539329,26.1283920659683,24.5941519084129,25.1664346937732,21.3009945582663,32.502356782642,47.4370695647364,40.9359225086769,35.9557575112135,52.6464294877952,48.7812121155662,53.0649814413204,23.4194423132568,27.5259847517852,25.147260281429,42.3705488397733,35.7452691555418,28.0270012048009,19.8486445552827,20.3378338183879,23.0220175387424,31.4807741369352,32.7767096028933,34.1779378436155,3.59133986730301,3.61427309940574,1.67726916406701,3.48218756554135,3.30389164251314,1.28580469357664,1.71007646244749,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,2.27685187643779,2.34894875748376,4.20500550937752,21.1474125726441,19.6177997043538,3.68737718685108,16.9170402297896,33.7989255964282,21.1769543969494,0.167186495390678,0.651844533267181,0.946895611469467,0,0.445641827540694,7.36514768687093,6.64601683750863,4.60366568400527,0.896639238079726,1.04047478047903,0,0.276350017785848,0.579606171470105,0.14828656316206,0,0,0.566546713487831,4.98186641682498,4.12352934579156,2.27717722817553,0.318565414324097,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.710331756132051,0,22.57995524117,44.6625126958457,16.2203332348735,78.0181972204677,23.4745300896273,13.9370192409448,49.155724724301,45.1204119572301,38.3843275246183,12.7245751528176,25.7916481260397,8.88627281342238,15.0775990274543,10.9793482116408,5.6975897841505,86.3379833253325,104.931997307994,11.6837061715686,12.5373410855472,12.7639642098111,3.57735936458013,4.57595928624102,2.22874500797739,40.7462935101745,53.3345448965797,33.3254881543291,46.3552512377688,36.4964509502618,44.0188867104108,40.5450235081413,21.190174251885,11.028754143288,6.02497102976406,36.2546385398232,25.0889794887109,23.6740195821724,31.9866879900906,34.8361037589157,13.3056595143279,18.8604673005983,18.6935057602315,38.3291593664708,51.260345616679,36.8235505300119,3.9534125230819,7.75560528296651,68.0306721342354,36.7759244254536,33.5570855911136,58.1276303770031,55.6463044252699,42.5602058638028,42.6114976108153,21.349799145941,38.9734726499113,14.0044965929895,20.2066008104532,26.6442902074938,15.438457619783,21.31850920576,27.649928956388,51.5064126770029,53.6243512251782,60.9750616651348,39.5754260429488,34.1551912616758,40.1689307168431,29.8065090032144,37.4644667800892,32.8575984138934,39.2040942903078,27.1993622206413,65.5316180595379,91.2645040106623,41.4106840327003,30.7791558885032,28.5376038948708,45.6536725716071,48.1185839404461,24.7892797195885,29.1520710721254,93.8207794652748,19.6472797713082,27.551147150743,108.332885686469,34.1103871779233,81.4144106544188,36.29278698466,68.1856382254715,40.5337941470586,118.643873894734,24.5773229374939,27.9647678296545,93.7225324243862,45.942956791804,56.1245560547714,26.8632585896983,22.3651818884484,20.3631262726193,1.09776335516636,0.265059536642971,1.39432731443422,2.90250954043037,2.77552935963191,0.72995471815166,54.7573363154356,64.9673347574814,89.7876988791123,43.650585235006,72.9098276486281,34.4272788115946,31.3567523545269,29.1623346159013,32.6470159287886,31.3746399493065,30.1333686271093,32.0898513421191,32.3765417456821,39.6289571654782,16.9775754563669,35.0604434508615,27.9870327705352,39.6923520740963,5.07020139287323,4.91413608338813,11.2250082269467,0,1.22988438543114,17.6714844607481,42.3636101677295,58.4489116939622,38.9047123233011,21.2953423864618,32.2550222257221,69.6756306137318,31.7528952455601,5.68058984377876,10.5667824812239,14.1479118805852,25.4642031917136,11.4152491340759,11.0628615714299,10.3018339451385,7.87894419479671,23.1664222487845,12.7822799568306,26.2454735162976,20.6618017684597,25.0941922119024,42.6298568065558,45.920162285206,79.7435972663639,2.46331618947972,6.51558411697873,97.8588705352444,71.4834968948129,58.7027315432667,11.1121315011296,28.2671434913125,31.6487107467127,46.1895604261304,14.9099864419819,33.3380794206748,11.1472308725925,30.0511306045567,8.7192013766656,23.7616046059878,21.7176482473067,118.026627131121,49.027559648248,18.3497300443561,27.0419335969552,59.9293182030791,49.6471962081474,81.7916089579425,12.8680194292333,29.3015666911379,49.3944202068461,46.9060105382978,9.59558261604874,30.0941711714703,25.9237864271244,33.1182714268112,27.5925455662477,6.08118903205952,2.51128545716063,21.0833939483032,35.2248537572627,27.5668646001873,42.7910715122155,38.2222649602409,44.7938383159836,32.0519124199413,0.672510863961164,18.1268299385773,24.1502883842659,21.3049440224382,8.13102797511883,2.60279707715243,6.95959931499926,2.01019518401218,7.01732626818479,0,0,0,18.1583407744327,32.0109133478193,33.9081279624669,35.3550464602372,41.3955254009415,34.5368288924317,33.1510204429378,65.9071958403704,59.1259510545561,40.3544978040769,30.5543775326301,51.6233671916769,46.7433845838286,37.006418760458,45.294931943033,2.06768026122887,5.60856922128404,2.66818894508611,33.0409052876423,36.6157966923094,31.7509807996164,32.5021228242598,55.2463103837025,34.5211916152681,30.6252566721125,27.632191449602,24.6106499349719,34.1361552823479,32.5382453923603,43.8577461523424,42.7061211271808,23.8857037424466,61.2428694483985,0.483437798366489,23.6597634957876,19.3370076765382,28.3591686966579,36.2361424333367,30.1586154406675,23.9135794840928,11.7833465769755,49.4140354581419,37.9961984098478,8.02192379585855,31.8453475398511,39.2916459188751,21.3756756941118,27.7609054842521,31.4297867550869,28.0946273358718,25.9973798505939,38.2294964107213,25.7455967930505,8.55113518919145,8.36593443279682,16.6692581325653,9.84043937099117,12.0390006025792,1.95777922130672,14.1016975820249,13.1190104873735,14.3566384499043,23.4021688573148,22.4957501781823,28.2278497412996,34.5068902336803,33.0032900661179,31.5645750989575,18.2614416276065,32.1937060489587,27.1020675183201,26.5315466227277,22.478748489093,15.1830153218434,10.8470805620397,10.115778085555,61.824458056539,69.5735286495715,47.3985343709208,43.7407683850046,75.0551502747001,52.1959795245044,42.8098946130055,38.0712198733697,18.2357600986237,18.6663860584048,27.260117731107,81.3754976370042,45.7894717196295,71.2775275354098,61.2259939355399,17.9872457583315,22.2374994086204,20.7349828128408,65.911488992901,88.7657798568846,48.4447224674828,51.6891763434966,25.1024894320223,79.2376100675666,31.8044793580607,20.7865984971958,82.4959251327772,60.0988224465275,35.1622656877846,64.8907310175569,84.5012280029364,64.27768570057,60.2643819579231,51.7405241826583,53.8038600836581,25.5272206923212,21.123543817821,56.3540261340375,75.2093455829667,47.9214332125698,34.9052586537496,45.1573076781201,47.9410566735627,37.5266239629497,42.2290433587546,60.9789515223407,2.35359501941948,42.6200318944518,50.5414427002877,56.7590596526945,19.0670422171776,0.507447609232169,0.764637207142375,0.569647187174163,0.714695326373367,0.822724546172388,1.94541993357815,0.540031437238115,1.58625035258854,7.26403683666817,28.8743956579008,17.6428955506343,0.185803175125719,0,0,0,0,0,0.846694330895531,0.649243880549111,0,0,2.19351854082233,2.50634477090067,0.677167111206413,0.642352300414798,0.201799707191048,2.55507742614196,0,2.76516687877612,2.46043718681657,1.50164227540718,3.71237381263877,4.17609260842864,1.23087398947712,3.51592382018778,0,1.4098700508785,15.5326648538822,10.2555725490326,3.15537356548735,0.557216921387392,20.4578025700617,31.5142719853751,9.50286978664444,25.8014989763355,0,0.562677665642051,3.00533503561846,7.08656659175066,4.01138275443188,18.7293108956006,5.24939439509181,0.503865495708552,11.249555075237,3.07712013652674,36.7026713440933,21.2987992219165,4.47552936689023,2.55786185113436,6.51046477203762,0,42.232056254962,3.87733098438087,1.11321717794222,0,10.1566826823241,3.93569999982881,8.69999490521752,14.4517679322585,17.0349945696153,16.3107500419876,2.41320361269025,2.04123229368278,1.90987494426621,0.885741385813839,0.241192877250816,0,0.552896299656123,1.47773809476774,2.19385397153973,6.75418473817739,16.7308493134324,7.15637404085313,10.7105532496181,1.61394733071642,3.68006342080066,5.64966333994442,14.6740533476683,13.9228341970831,6.92945208824225,0,0,3.98908036560375,3.60953056987489,4.11731322067253,4.19553967439607,3.22581345631115,3.97341447450947,8.86191871017714,4.73375143661528,1.55488378577335,0.216388639742091,10.9478812418636,6.72277490225378,3.05515072466813,8.00607047437679,3.58335422944858,2.92381458615275,2.29163852134302,9.63093176758547,1.1713222286267,0,11.7398771359254,10.6823366995001,6.31335044559025,4.83962864194656,1.22429104652196,19.3350933663173,2.25485129121739,3.21433393331466,17.2810006903868,21.5144771319074,23.2310359621347,15.5314158704846,1.99226682220855,13.8674673013139,16.8352946185077,24.9880613406663,12.3624073344172,9.78469342155369,48.6720471894675,18.7707282700825,13.375345026772,18.9686705792913,16.6821108360081,2.11814704059601,2.71176888936639,20.1451629230724,14.3074520426153,0.569797163602908,19.5551382734803,8.49683494666257,15.7955216107121,19.980960958213,8.93360586355457,2.29073192331831,1.54435498075768,17.5746853545543,9.31894016740744,8.01359717697104,30.4425421604895,31.4854567400123,13.3617665103582,13.5806777253714,3.00210144354895,0.684526894459965,8.94226116468806,50.282556646135,8.93817004549669,8.09918963689537,8.24977526442061,6.46085722119133,7.58780201896166,10.7306512034143,5.35611497860494,2.5529719544956,12.6104959239841,0,2.83619456306005,2.55489160981616,2.96575592958414,4.33080918664895,2.54019996197353,0.795229689809303,0.408610218334727,1.92903778158023,1.51293380256957,1.66176135211674,86.6149482473277,164.819816320843,0.789744236554321,19.4552118807574,3.94028536495991,2.8850023474249,12.3552393727706,13.2672631106305,10.7472510498889,13.579211201094,6.62091970365432,11.187815656809,90.68093349287,83.829484646523,71.1960445038512,9.578415324999,5.66438393170439,22.1504428321048,12.8042663417742,5.8620893471233,6.62534444561107,2.19781025814636,1.19009341568421,5.47477881229854,5.63852017853338,5.76652027865551,3.61569901729232,7.04206394090232,3.96932817449561,1.38328142328561,0.243585196761792,16.5968727020247,29.3769613819516,16.2948431114755,18.6870801825712,17.0493767969098,2.66991963625398,0.886068179966986,1.22026264901963,0.500763722825999,1.14681839138014,0.998361463831671,3.29110935589332,2.35192679391592,19.1220024182023,8.03740322970734,33.9703746918511,23.291316150119,0,1.1593682288866,41.6420900054379,29.6815903505975,64.3574799343031,45.0779152554712,38.2383210663914,48.9396171878095,35.2413705331262,45.2180462052085,36.0614305352051,23.3611136983622,17.8412379223347,8.99606224327209,21.1157621351713,52.6676883957886,39.0787320400252,30.7829586468923,32.1551283254047,50.266288006281,29.7015635239403,23.8221743555353,23.6303225493475,33.87446447113,28.6629039863003,52.4036371708731,60.0942484069888,57.2474130902063,6.30924491143255,48.9254369234551,10.0787547946215,10.7007659705737,39.6735369646477,73.855669309303,21.5368299965691,29.9078364606084,30.8801447160972,30.699766941019,28.0935742053951,51.8938762948761,34.971085215186,24.086702747267,21.4166811873343,43.1481137771883,0,3.50748555910899,4.51740457065435,1.14495775979091,7.8626363723139,15.9752390689918,42.6850489184427,17.5988908352338,1.38699248602383,0,24.9707019569408,59.8344338318482,16.9254204340528,30.4817857416157,0,9.488583402908,0.157265941855896,0.218419276384028,1.52759276958623,1.2754495206101,2.47871528518004,2.23457967189298,43.5665960395183,0,7.20513673456923,34.9149184253777,29.7058113032604,0.449604575675217,0,0.798169295285756,0.615349092722265,0,1.65977405914123,1.13032951942296,8.56616521554926,30.0332018613138,2.59533391365029,16.3251452684294,8.31784796282435,43.0961767877899,5.52287940848081,10.5425597721626,5.18951265609875,6.85797233591968,3.90757005616546,3.66669372273991,18.5062266786409,10.3499260351932,0.810451015420736,1.56215619722769,0.206686796501184,0.951237152908602,0.546974809018219,6.030835435429,16.3749688868467,1.40696995487696,6.77140866489855,3.21421101526972,0.672567444437648,4.85572483389305,0.227662191351298,7.98321331463749,0.460935950223117,18.0062409909289,1.83518279037446,1.31545547125698,17.1381069281754,13.3477682270483,4.70958557103084,0.471346769748006,3.36326595976547,2.73947616152849,13.1715830643359,1.9110067515482,4.36006919477604,0,10.4617282831313,1.56472445072321,26.4564750360983,28.388614490336,33.4608215104142,33.8717234288905,7.744092458765,31.1213161921387,31.6141731656475,5.92741870267301,24.9726486713015,28.2287810954531,26.7550902913681,3.35566295393377,25.8135114408089,16.0931660976596,5.82685953469105,7.69971051421853,18.5570309014112,11.1713528403602,0.701818390386317,1.79055697645231,1.30812099855325,3.16249029709088,0.219881033490858,1.50962843566674,5.78806185809585,2.18559560503957,1.41095188908457,8.33504293963279,3.53514820652439,1.57046773691956,0.297046400327086,2.5359343655004,31.7763704466218,2.53756578545605,3.22289439867886,3.89770508107223,2.67830907908486,21.1736923029415,16.0482733378336,13.8763913766838,4.12856355064087,0.860037498908708,2.83988811947732,1.69978725477287,0,4.2322147241232,45.3833922163437,39.2849284336706,69.6528765019301,3.78499274505237,4.26135730658413,1.0135880080915,10.8108159526501,3.20660886318673,12.6814961358086,2.005660314339,4.84983668596732,4.55539021265503,0.829169439458779,0.517164979309476,10.661699095049,5.71354635512977,2.45437857376823,1.73809200028402,25.229669080638,2.41859201457027,4.85081253499726,35.2701131593077,10.951465634729,10.3722161642465,6.52672069073355,4.32458463509817,5.45401899693529,38.635299207733,36.6837336345186,24.1629793666719,9.38563769613817,9.04586686953212,8.54481974463051,2.66302709674205,5.83694001413976,6.41136984606466 | |||
|short_description=p2@LMNA | |||
}} |
Revision as of 21:23, 10 January 2014
Short description: | p2@LMNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMNA_5end |
Coexpression cluster: | C1839_Mast_immature_Fibroblast_Mesenchymal_Hair_tenocyte_Keratocytes |
Association with transcript: | -11bp_to_ENST00000392355_5end |
EntrezGene: | LMNA |
HGNC: | 6636 |
UniProt: | Q3BDU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.30e-22 | 121 |
fibroblast | 1.11e-17 | 76 |
embryonic cell | 3.25e-17 | 250 |
muscle precursor cell | 5.02e-16 | 58 |
myoblast | 5.02e-16 | 58 |
multi-potent skeletal muscle stem cell | 5.02e-16 | 58 |
muscle cell | 3.43e-15 | 55 |
smooth muscle cell | 5.82e-14 | 43 |
smooth muscle myoblast | 5.82e-14 | 43 |
somatic stem cell | 2.70e-12 | 433 |
multi fate stem cell | 4.89e-12 | 427 |
electrically responsive cell | 1.01e-11 | 61 |
electrically active cell | 1.01e-11 | 61 |
vascular associated smooth muscle cell | 2.55e-11 | 32 |
stem cell | 4.43e-11 | 441 |
skin fibroblast | 3.42e-09 | 23 |
lining cell | 5.10e-07 | 58 |
barrier cell | 5.10e-07 | 58 |