FFCP PHASE1:Hg19::chr1:152975124..152975130,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=6707 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11268 | |||
|TSSclassifier=not | |||
|UniProt=F5GZ12 | |||
|association_with_transcript=-366bp_to_ENST00000542696_5end | |||
|coexpression_cluster_id=C3867 | |||
|description=CAGE_peak_3_at_SPRR3_5end | |||
|id=chr1:152975124..152975130,+ | |||
|ontology_enrichment_celltype=CL:1000415!4.98e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002231;7.42e-11;3!CL:0000307;1.09e-10;3!CL:0002537;5.38e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,7.42e-11,3;CL:0000068,1.20e-10,3;CL:0000069,1.20e-10,3;CL:0000307,1.20e-10,3;CL:0000377,1.20e-10,3;CL:0002537,5.38e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.48e-30;1!UBERON:0008814;1.78e-15;2!UBERON:0010056;1.78e-15;2!CL:0000377;1.09e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!6.82e-13!1;UBERON:0001961!6.82e-13!1;UBERON:0001744!6.82e-13!1;UBERON:0001735!6.82e-13!1;UBERON:0000002!1.04e-08!6;UBERON:0001560!1.04e-08!6;UBERON:0007196!4.37e-08!14;UBERON:0001558!4.37e-08!14;UBERON:0003126!1.33e-07!7;UBERON:0001005!1.33e-07!7;UBERON:0000341!2.74e-07!2;UBERON:0003127!4.69e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.37e-15;2!UBERON:0001043;6.73e-11;3!UBERON:0001723;8.99e-11;3!UBERON:0001033;8.99e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.05e-15,2;UBERON:0001043,6.73e-11,3;UBERON:0009143,6.73e-11,3;UBERON:0001723,8.99e-11,3;UBERON:0001033,8.99e-11,3;UBERON:0010056,8.99e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.98526428083326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68592842519078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,1.69290568708354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.4982641047241,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0,0,0,0,0,0,2.61260097476354,0,0.26940821205835,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SPRR3 | |||
}} |
Revision as of 20:56, 10 January 2014
Short description: | p3@SPRR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SPRR3_5end |
Coexpression cluster: | C3867_Prostate_esophagus_tongue_throat_amniotic_cervix_Gingival |
Association with transcript: | -366bp_to_ENST00000542696_5end |
EntrezGene: | SPRR3 |
HGNC: | 11268 |
UniProt: | F5GZ12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 7.42e-11 | 3 |
duct epithelial cell | 1.20e-10 | 3 |
branched duct epithelial cell | 1.20e-10 | 3 |
tracheal epithelial cell | 1.20e-10 | 3 |
tracheoblast | 1.20e-10 | 3 |
amnion mesenchymal stem cell | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
throat | 2.05e-15 | 2 |
esophagus | 6.73e-11 | 3 |
esophageal region | 6.73e-11 | 3 |
tongue | 8.99e-11 | 3 |
gustatory system | 8.99e-11 | 3 |
future tongue | 8.99e-11 | 3 |