FFCP PHASE1:Hg19::chr1:152009431..152009457,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6282 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10488 | |||
|TSSclassifier=strong | |||
|UniProt=P31949 | |||
|association_with_transcript=53bp_to_ENST00000271638,NM_005620,uc001ezn.2_5end | |||
|description=CAGE_peak_2_at_S100A11_5end | |||
|id=chr1:152009431..152009457,- | |||
|ontology_enrichment_celltype=CL:0000548!5.30e-34!679;CL:0000004!5.30e-34!679;CL:0000255!5.30e-34!679;CL:0000012!1.22e-32!682;CL:0002371!1.88e-25!591;CL:0000003!7.48e-25!722;CL:0000144!2.90e-24!625;CL:0000063!1.82e-21!578;CL:0000860!1.50e-12!45;CL:0002057!4.13e-12!42;CL:0002194!7.76e-12!63;CL:0000576!7.76e-12!63;CL:0000040!7.76e-12!63;CL:0000559!7.76e-12!63;CL:0002009!4.11e-11!65;CL:0000766!4.84e-11!76;CL:0000066!1.41e-10!254;CL:0000055!6.69e-10!180;CL:0000839!2.84e-09!70;CL:0000557!3.03e-09!71;CL:0000220!7.54e-09!246;CL:0002321!2.35e-08!248;CL:0000192!2.63e-08!42;CL:0000514!2.63e-08!42;CL:0002076!7.58e-08!43;CL:0000359!1.93e-07!32;CL:0000680!2.05e-07!57;CL:0000056!2.05e-07!57;CL:0000355!2.05e-07!57;CL:0000183!3.19e-07!59;CL:0000057!3.45e-07!75;CL:0000187!4.83e-07!54;CL:0000723!7.81e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-11;33!CL:0002057;2.54e-11;33!CL:0000473;1.15e-10;39!CL:0000234;1.15e-10;39!CL:0000349;1.85e-07;19!CL:0000359;4.29e-07;32!CL:0000576;7.92e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.79e-14,48;CL:0000234,8.79e-14,48;CL:0000860,4.13e-12,42;CL:0002057,4.13e-12,42;CL:0002194,1.98e-11,59;CL:0000576,1.98e-11,59;CL:0000040,1.98e-11,59;CL:0000559,1.98e-11,59;CL:0002009,1.07e-10,61;CL:0000766,1.32e-10,72;CL:0000066,1.38e-10,253;CL:0000839,7.65e-09,66;CL:0000557,8.10e-09,67;CL:0002321,2.48e-08,250;CL:0000192,3.55e-08,43;CL:0000514,3.55e-08,43;CL:0002076,1.11e-07,42;CL:0000349,1.84e-07,19;CL:0000359,1.93e-07,32;CL:0000680,2.46e-07,58;CL:0000056,2.46e-07,58;CL:0000355,2.46e-07,58;CL:0000057,3.54e-07,76;CL:0000187,5.78e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.25e-20!448;UBERON:0004120!2.25e-20!448;UBERON:0006603!2.25e-20!448;UBERON:0002204!4.78e-15!167;UBERON:0003081!3.22e-14!216;UBERON:0003102!5.74e-10!95;UBERON:0004765!1.94e-09!101;UBERON:0001434!1.94e-09!101;UBERON:0000486!2.00e-09!82;UBERON:0000467!3.48e-09!625;UBERON:0002371!4.03e-09!80;UBERON:0000468!4.58e-09!659;UBERON:0000480!4.68e-09!626;UBERON:0001474!2.20e-08!86;UBERON:0000914!2.04e-07!83;UBERON:0002329!2.04e-07!83;UBERON:0003077!2.04e-07!83;UBERON:0003059!2.04e-07!83;UBERON:0007282!2.04e-07!83;UBERON:0009618!2.04e-07!83;UBERON:0007285!2.04e-07!83;UBERON:0005631!5.33e-07!14;UBERON:0000158!5.33e-07!14 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.11e-16,315;UBERON:0004120,6.11e-16,315;UBERON:0006603,6.11e-16,315;UBERON:0002204,3.11e-14,167;UBERON:0003081,3.06e-12,203;UBERON:0003102,2.10e-11,99;UBERON:0000486,2.35e-09,83;UBERON:0001434,1.00e-08,100;UBERON:0004765,1.04e-08,90;UBERON:0002371,1.09e-08,76;UBERON:0001474,5.82e-08,82;UBERON:0005631,5.33e-07,14;UBERON:0000158,5.33e-07,14 | |||
|phase1_expression=1346.05511201555,901.57730610493,946.226914696254,1137.83340227509,718.713439839079,1007.55099533593,1165.17943957423,1810.5091572413,725.573675139151,1094.74468711422,2255.99117605486,5547.10020387359,3169.68777737133,526.997130903879,460.310954886075,618.539134735633,776.873246622906,721.546369302725,837.29268272451,725.429274188434,416.977412903253,385.862762139526,210.955922515589,232.823397048976,184.673222843955,21.4721670151743,23.2344668143346,20.9370678294387,414.605947798745,188.076405067634,269.84450293992,1931.70399263023,2154.8271429396,1514.142671633,0,0,10.8632162553893,176.170539913137,152.213235629838,148.218424698927,278.103019005986,452.479451428514,305.999774349414,1391.60654335921,1339.94809632052,1161.00731684489,1358.31529167682,1307.92505179743,1825.40935005574,1481.04043567443,1093.80621687926,2138.50880488248,938.742488645812,646.775652950994,826.101568225485,1641.8496854906,1863.67609874503,2022.28663652132,1865.27524010828,1936.80667840423,1359.87006657456,1206.26620478282,1115.79970073541,1187.03593023355,2498.12112611485,1803.71762929313,1945.69670586218,1339.4066344837,1111.28009915345,1734.90449150447,1787.1393317737,2306.89111182611,2229.16105713359,1246.19493395414,986.696556137767,1154.59016081463,716.881323976932,547.094420621607,769.393383518923,1527.38329370935,1212.19823085126,1249.24014759633,15.839662001519,27.8530691743687,26.6852776159066,34.5651480278871,14.8146515203325,28.1628695577697,31.0691090208885,23.8513438633841,1.1384259382189,7.6340834618222,4.96955196562797,9.25199300053181,99.7705242107134,14.7495087474043,19.2775574711556,18.4715058492107,28.1674053629328,329.858955405808,26.3997035973208,28.406868344084,9.74133642039557,395.507121942366,95.7469199293221,167.258090410634,113.737622781307,351.738763966704,264.280594241673,246.492419000911,258.663616647554,346.604490539123,32.4747573324912,31.8373585426759,25.0885257131944,424.683416430478,159.036504844797,144.667154548187,122.967570321478,146.22152517476,134.123191494422,151.121875067291,207.643089208249,202.346832235135,196.141240687183,185.159811098421,179.005903328788,24.9992361598668,19.523134292196,16.5099820426391,531.498968564436,354.13005392352,609.265107184422,1322.14441942274,710.897157281691,707.430398604663,1076.02188636014,523.132485575334,331.533603794386,373.835764121883,295.30054950029,186.186755819999,4756.23928394743,3110.51069051858,1163.50240625204,1185.82351100801,1401.50986182936,38.6354811374654,70.9273689367359,43.4605276555591,333.920844376065,366.459937515209,598.470224771493,274.739659775069,698.886060725703,538.956244160592,357.79938271102,174.431312439297,231.248070746362,204.849015011978,795.185071973456,464.526256594011,346.324059660853,479.064993690667,602.745609224029,198.602595703793,123.491154944393,166.43976815435,277.503113813249,290.475291827847,209.216391568525,975.175089026868,1318.45289810431,3421.15783905818,1226.02980483235,1137.90177781791,602.859000242585,561.626103426177,1035.6316760192,712.621229780872,707.745841687944,1492.58533547223,696.801508260077,466.637768049399,654.501460066289,1815.98641688389,611.322655873279,698.04354543288,759.797627005,728.492516112262,1007.73245296079,381.427251594948,353.368637555631,412.644470091206,657.376431440756,453.627133832359,548.349920699787,926.642228680002,708.914286241623,6422.09856983471,1852.59756960226,566.282687341479,370.225700301142,1491.15906953587,828.789748223022,938.465630736598,629.196990700827,867.983065540481,445.962634322511,760.691418971737,1051.18222975143,404.522797521774,1490.55178290478,650.542363615214,1359.2114017896,409.451382017312,2255.95898049723,599.530213829772,1027.18481894942,1265.6886248913,564.1102425089,1602.86513070353,1019.90696274758,2411.70218662478,2173.24108886777,2170.25037330859,31.4692161814356,40.0239900330886,108.52514264013,139.631441105704,101.180661201127,47.8120340389337,871.423895077075,1278.76298512746,1193.48572048543,730.915118722335,969.484143882253,991.056063933772,806.677742023717,912.226748108979,952.609042489687,937.753127373716,993.926623456384,1000.71796916474,897.713202948458,1030.35288630243,391.960546405688,1201.87200149553,929.334117586301,1214.29195604458,6.33775174109154,6.87979051674338,31.9026549607958,67.1023911110269,299.968801606654,764.50616269023,4836.25607681649,2158.1136625463,2555.54700767607,2201.75322586983,821.688545992639,1156.40748123089,326.188832977118,238.005121413833,940.795866911639,351.099200954932,224.08498808708,106.542325251375,1118.13922311237,1207.89003006749,991.023449501774,3092.8343723453,1393.41714645683,3917.13692230741,3629.08589760816,3291.45065757924,1997.87152445514,2594.77980305265,1822.21787407225,4752.22959274427,276.648179669556,87.9071209892873,71.3393769413959,105.412431911027,978.566048936617,1520.6959221475,760.741232393205,629.546601363555,440.718633726445,534.310299904329,384.150725455497,1946.59562423546,782.548323555738,1174.21929427923,1789.50836123492,2993.58445178026,860.5182021020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| |||
|short_description=p2@S100A11 | |||
}} |
Revision as of 20:54, 10 January 2014
Short description: | p2@S100A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_S100A11_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000271638, NM_005620, uc001ezn.2_5end |
EntrezGene: | S100A11 |
HGNC: | 10488 |
UniProt: | P31949 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.79e-14 | 48 |
phagocyte | 8.79e-14 | 48 |
classical monocyte | 4.13e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.13e-12 | 42 |
monopoietic cell | 1.98e-11 | 59 |
monocyte | 1.98e-11 | 59 |
monoblast | 1.98e-11 | 59 |
promonocyte | 1.98e-11 | 59 |
macrophage dendritic cell progenitor | 1.07e-10 | 61 |
myeloid leukocyte | 1.32e-10 | 72 |
epithelial cell | 1.38e-10 | 253 |
myeloid lineage restricted progenitor cell | 7.65e-09 | 66 |
granulocyte monocyte progenitor cell | 8.10e-09 | 67 |
embryonic cell | 2.48e-08 | 250 |
smooth muscle cell | 3.55e-08 | 43 |
smooth muscle myoblast | 3.55e-08 | 43 |
endo-epithelial cell | 1.11e-07 | 42 |
extraembryonic cell | 1.84e-07 | 19 |
vascular associated smooth muscle cell | 1.93e-07 | 32 |
muscle precursor cell | 2.46e-07 | 58 |
myoblast | 2.46e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.46e-07 | 58 |
fibroblast | 3.54e-07 | 76 |
muscle cell | 5.78e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 6.11e-16 | 315 |
mesoderm-derived structure | 6.11e-16 | 315 |
presumptive mesoderm | 6.11e-16 | 315 |
musculoskeletal system | 3.11e-14 | 167 |
lateral plate mesoderm | 3.06e-12 | 203 |
surface structure | 2.10e-11 | 99 |
multilaminar epithelium | 2.35e-09 | 83 |
skeletal system | 1.00e-08 | 100 |
skeletal element | 1.04e-08 | 90 |
bone marrow | 1.09e-08 | 76 |
bone element | 5.82e-08 | 82 |
extraembryonic membrane | 5.33e-07 | 14 |
membranous layer | 5.33e-07 | 14 |