FFCP PHASE1:Hg19::chr1:151040524..151040538,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1173 | |||
|description=CAGE_peak_at_chr1:151040524..151040538,+ | |||
|id=chr1:151040524..151040538,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.69e-09!25;CL:0000540!2.36e-07!6;CL:0000031!2.36e-07!6;CL:0000404!2.36e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.97e-25;6!CL:0000404;1.97e-25;6!CL:0002553;1.03e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.14e-25,6;CL:0000031,2.14e-25,6;CL:0000404,2.14e-25,6;CL:0000047,3.09e-19,8;CL:0002553,7.37e-18,1 | |||
|ontology_enrichment_development_v019=CL:0000031;1.97e-25;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;9.11e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,9.64e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.51e-24!82;UBERON:0000073!1.05e-23!94;UBERON:0001016!1.05e-23!94;UBERON:0005743!2.43e-22!86;UBERON:0000955!3.25e-18!69;UBERON:0006238!3.25e-18!69;UBERON:0001049!1.55e-17!57;UBERON:0005068!1.55e-17!57;UBERON:0006241!1.55e-17!57;UBERON:0007135!1.55e-17!57;UBERON:0003075!3.84e-17!86;UBERON:0007284!3.84e-17!86;UBERON:0002346!6.05e-17!90;UBERON:0002616!1.08e-16!59;UBERON:0002020!7.95e-14!34;UBERON:0003528!7.95e-14!34;UBERON:0001893!2.23e-13!34;UBERON:0001869!3.23e-13!32;UBERON:0000956!4.19e-13!25;UBERON:0000203!4.19e-13!25;UBERON:0002791!1.38e-12!33;UBERON:0000924!1.43e-12!173;UBERON:0006601!1.43e-12!173;UBERON:0004121!1.69e-12!169;UBERON:0002619!6.90e-12!22;UBERON:0001950!1.98e-11!20;UBERON:0002780!2.14e-11!41;UBERON:0001890!2.14e-11!41;UBERON:0006240!2.14e-11!41;UBERON:0000033!3.88e-11!123;UBERON:0003056!5.04e-11!61;UBERON:0003080!5.48e-11!42;UBERON:0000153!4.28e-10!129;UBERON:0007811!4.28e-10!129;UBERON:0003076!2.69e-08!15;UBERON:0003057!2.69e-08!15;UBERON:0001872!7.05e-08!5;UBERON:0004733!7.80e-07!12;UBERON:0002028!7.80e-07!12;UBERON:0007277!7.80e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.71e-13;20!UBERON:0002619;6.02e-12;22!UBERON:0000956;1.33e-10;25!UBERON:0000203;1.33e-10;25!UBERON:0001871;1.43e-10;6!UBERON:0002771;8.69e-10;2!UBERON:0002791;7.05e-08;32!UBERON:0001869;9.03e-08;32!UBERON:0003528;1.62e-07;34!UBERON:0002020;1.62e-07;34!UBERON:0001893;4.66e-07;34!UBERON:0002114;7.08e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.36e-13,20;UBERON:0002619,5.61e-12,22;UBERON:0000956,1.25e-10,25;UBERON:0000203,1.25e-10,25;UBERON:0001871,1.46e-10,6;UBERON:0002771,8.69e-10,2;UBERON:0001017,1.93e-09,81;UBERON:0001016,1.79e-08,89;UBERON:0002791,1.96e-08,32;UBERON:0001869,1.96e-08,32;UBERON:0003528,5.77e-08,34;UBERON:0002020,5.77e-08,34;UBERON:0001893,5.77e-08,34;UBERON:0002114,6.88e-07,2;UBERON:0003056,9.42e-07,61 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,1.54657762555539,1.17261385734044,7.01732626818479,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.110579259931225,0.591095237907095,0.658156191461918,0,0,0,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0,0,0,0.392125068635479,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0,1.25501137532991,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,6.9554970994119,0.3755727921195,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0.869526171664951,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0.829412415681711,0.265841714557995,0,0,0.761610424337591,0.406870733204662,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0.323474434190045,0,0.109209638192014,0,0.212574920101683,0,0,0,0,1.60114149657094,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,1.76450187355203,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0.206686796501184,0.0634158101939068,3.28184885410932,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.078493092850514,0.314231179832004,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,2.18175345170189,0,0,0,0,0,0.327796715891087,0.126698501011437,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:151040524..151040538,+ | |||
}} |
Revision as of 20:47, 10 January 2014
Short description: | p@chr1:151040524..151040538, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:151040524..151040538, + |
Coexpression cluster: | C1173_medial_Neurons_parietal_temporal_medulloblastoma_occipital_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.14e-25 | 6 |
neuroblast | 2.14e-25 | 6 |
electrically signaling cell | 2.14e-25 | 6 |
neuronal stem cell | 3.09e-19 | 8 |
lung fibroblast | 7.37e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
neocortex | 4.36e-13 | 20 |
regional part of cerebral cortex | 5.61e-12 | 22 |
cerebral cortex | 1.25e-10 | 25 |
pallium | 1.25e-10 | 25 |
temporal lobe | 1.46e-10 | 6 |
middle temporal gyrus | 8.69e-10 | 2 |
central nervous system | 1.93e-09 | 81 |
nervous system | 1.79e-08 | 89 |
regional part of telencephalon | 1.96e-08 | 32 |
cerebral hemisphere | 1.96e-08 | 32 |
brain grey matter | 5.77e-08 | 34 |
gray matter | 5.77e-08 | 34 |
telencephalon | 5.77e-08 | 34 |
duodenum | 6.88e-07 | 2 |
pre-chordal neural plate | 9.42e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 9.64e-07 | 3 |