FFCP PHASE1:Hg19::chr1:100111479..100111490,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54873 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15846 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NP74 | |||
|association_with_transcript=-8bp_to_ENST00000263174_5end | |||
|coexpression_cluster_id=C2508 | |||
|description=CAGE_peak_8_at_PALMD_5end | |||
|id=chr1:100111479..100111490,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.54e-19!24;CL:0000071!5.06e-15!18;CL:0002546!5.06e-15!18;CL:0000115!2.63e-13!35;CL:1000413!6.83e-11!9;CL:0002078!7.21e-10!44;CL:0002544!1.03e-07!6;CL:0002543!1.67e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.64e-39;24!CL:0000071;2.17e-28;18!CL:0000115;1.11e-24;36!CL:1000413;4.56e-20;9!CL:0002078;3.05e-15;45!CL:0002544;2.09e-12;6!CL:0002138;4.67e-12;6!CL:0002543;8.66e-12;6!CL:0000213;4.71e-11;58!CL:0000215;4.71e-11;58!CL:0002618;9.38e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.15e-39,24;CL:0000115,5.79e-30,36;CL:0000071,2.57e-28,18;CL:0002546,2.57e-28,18;CL:0002078,8.91e-23,45;CL:1000413,5.22e-20,9;CL:0000213,2.27e-16,58;CL:0000215,2.27e-16,58;CL:0002544,2.25e-12,6;CL:0005020,5.43e-12,6;CL:0002138,5.43e-12,6;CL:0005022,5.43e-12,6;CL:0002543,9.18e-12,6;CL:0002618,1.03e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.17e-28;18!CL:0005022;4.67e-12;6!UBERON:0003104;2.05e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.89e-38!115;UBERON:0004111!9.43e-28!241;UBERON:0000477!6.65e-27!286;UBERON:0000025!2.96e-25!194;UBERON:0000483!1.43e-15!309;UBERON:0000119!4.27e-15!312;UBERON:0001986!5.06e-15!18;UBERON:0004638!5.06e-15!18;UBERON:0004852!5.06e-15!18;UBERON:0000467!4.75e-14!625;UBERON:0000480!6.12e-14!626;UBERON:0001049!5.70e-13!57;UBERON:0005068!5.70e-13!57;UBERON:0006241!5.70e-13!57;UBERON:0007135!5.70e-13!57;UBERON:0003075!7.34e-13!86;UBERON:0007284!7.34e-13!86;UBERON:0000487!1.28e-12!22;UBERON:0000468!3.43e-12!659;UBERON:0003914!3.62e-12!118;UBERON:0002346!1.15e-11!90;UBERON:0000481!3.25e-11!347;UBERON:0003915!6.83e-11!9;UBERON:0004700!6.83e-11!9;UBERON:0001917!6.83e-11!9;UBERON:0005743!1.69e-10!86;UBERON:0002616!2.11e-10!59;UBERON:0001017!2.30e-10!82;UBERON:0006914!2.31e-10!25;UBERON:0000955!2.84e-10!69;UBERON:0006238!2.84e-10!69;UBERON:0003080!1.29e-09!42;UBERON:0000922!1.38e-09!612;UBERON:0000055!1.39e-09!69;UBERON:0000073!2.01e-09!94;UBERON:0001016!2.01e-09!94;UBERON:0000923!2.22e-09!604;UBERON:0005291!2.22e-09!604;UBERON:0006598!2.22e-09!604;UBERON:0002532!2.22e-09!604;UBERON:0002050!2.75e-09!605;UBERON:0005423!2.75e-09!605;UBERON:0002780!7.36e-09!41;UBERON:0001890!7.36e-09!41;UBERON:0006240!7.36e-09!41;UBERON:0004872!8.39e-09!84;UBERON:0000153!3.53e-08!129;UBERON:0007811!3.53e-08!129;UBERON:0001041!3.55e-08!98;UBERON:0002049!3.75e-08!79;UBERON:0007798!3.75e-08!79;UBERON:0001048!4.38e-08!168;UBERON:0001981!9.37e-08!60;UBERON:0007500!9.37e-08!60;UBERON:0004537!9.37e-08!60;UBERON:0006965!9.37e-08!60;UBERON:0000062!1.02e-07!511;UBERON:0000475!1.04e-07!365;UBERON:0003056!1.30e-07!61;UBERON:0004921!1.37e-07!129;UBERON:0004185!1.37e-07!129;UBERON:0001009!1.61e-07!113;UBERON:0000033!2.30e-07!123;UBERON:0000064!2.48e-07!219;UBERON:0002020!2.55e-07!34;UBERON:0003528!2.55e-07!34;UBERON:0002298!3.53e-07!8;UBERON:0004121!3.55e-07!169;UBERON:0001893!4.27e-07!34;UBERON:0000077!8.62e-07!130;UBERON:0002791!9.49e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.17e-28;18!UBERON:0001986;2.17e-28;18!UBERON:0004852;2.17e-28;18!UBERON:0000487;1.50e-22;22!UBERON:0003915;4.56e-20;9!UBERON:0004700;4.56e-20;9!UBERON:0001917;4.56e-20;9!UBERON:0006914;2.10e-19;25!UBERON:0000490;6.20e-13;33!UBERON:0004151;1.38e-09;3!UBERON:0001473;6.18e-09;8!UBERON:0004536;6.18e-09;8!UBERON:0006558;6.18e-09;8!UBERON:0003978;9.66e-09;3!UBERON:0000946;9.66e-09;3!UBERON:0001638;1.01e-07;9!UBERON:0003920;1.01e-07;9!UBERON:0004582;1.01e-07;9!UBERON:0000055;1.57e-07;65!UBERON:0002465;4.64e-07;10!UBERON:0002081;6.68e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.57e-28,18;UBERON:0001986,2.57e-28,18;UBERON:0004852,2.57e-28,18;UBERON:0000487,1.72e-22,22;UBERON:0003915,5.22e-20,9;UBERON:0004700,5.22e-20,9;UBERON:0001917,5.22e-20,9;UBERON:0006914,2.37e-19,25;UBERON:0000055,1.36e-17,68;UBERON:0004111,3.85e-16,240;UBERON:0003914,6.39e-15,117;UBERON:0002049,1.65e-14,78;UBERON:0007798,1.65e-14,78;UBERON:0001009,1.75e-13,112;UBERON:0000025,2.59e-13,192;UBERON:0007500,2.30e-12,59;UBERON:0001981,2.30e-12,59;UBERON:0004537,2.30e-12,59;UBERON:0006965,2.30e-12,59;UBERON:0004872,7.01e-12,83;UBERON:0004535,1.03e-11,109;UBERON:0004151,1.46e-09,3;UBERON:0003978,4.86e-09,3;UBERON:0009751,4.86e-09,3;UBERON:0000946,4.86e-09,3;UBERON:0002523,4.86e-09,3;UBERON:0005983,4.86e-09,3;UBERON:0002165,4.86e-09,3;UBERON:0002062,4.86e-09,3;UBERON:0007280,4.86e-09,3;UBERON:0001473,6.90e-09,8;UBERON:0004536,6.90e-09,8;UBERON:0006558,6.90e-09,8;UBERON:0007023,2.50e-08,114;UBERON:0001638,1.05e-07,9;UBERON:0003920,1.05e-07,9;UBERON:0004582,1.05e-07,9;UBERON:0000483,1.83e-07,306;UBERON:0000119,2.72e-07,309;UBERON:0002465,5.05e-07,10;UBERON:0002081,6.44e-07,2;UBERON:0010227,6.44e-07,2;UBERON:0000490,8.07e-07,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.189069634328136,0,0,0.327447688744282,0,0,0,0,0,0,0,0,2.38514888840046,3.4409383804245,2.08284300964557,3.39184765154406,5.87299210693868,4.12677062910101,1.46296476575767,4.65150166504792,4.26919515224052,11.0457802212341,0,1.52054421143703,0,0.735326160691737,5.67099363517232,5.17938424047663,3.14341121676638,2.81528701208306,1.53316637465883,0.949265659568129,1.46561395144326,0,0,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0.933633106199299,0.538842688278752,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02088964844019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.723033089650446,0.441175890929576,0.217879444092406,0.237270619111097,0,0.588664395376038,0,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0,1.15493158208859,0,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,1.94324324491925,4.62681758070868,0,0,0,0,0,0,0,0.256450125116389,0,0,3.60643540767028,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,1.75380354101505,0,0,0,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0.996239941255349,0,0,0,0,0.622079175323615,0,0.537063524026827,0,0.295930216910801,0,0,0,0.463840490809256,0,0,0.874599999961957,5.79999660347835,0,0.508507300585533,0,0,0,0,0,0.482385754501632,1.52581736317083,0.442317039724898,0,0.438770794307945,0.21787692703798,0.278847488557207,0.769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.269604531922708,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0.775912131907355,0,1.80784592624426,0,0,0.50648636764703,0,0.0801588202515337,0.426905989478705,3.79638258206047,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0.859530882839914,0,1.95497680890578,1.60412296808179,2.15361907373044,0.399358000997982,3.43380838509257,1.78537165953498,1.41085292222125,0,0,4.17550866228285,5.19219907801349,4.9204587013555,0.0984274815147488,0,0,0.681017030557878,0,0,0,0,0.77380195455795,0.485996453264197,0.335434687599266,0.157611414598396,0.157363764404994,0,0.537862017998534,0,3.57347663186684,3.31045985182716,0,0,0,0,0,0,0,0,1.75862680413699,1.32506888912221,0.258565912723101,1.05786081394152,0,0.704815022316672,1.38823636338003,1.10043013569766,1.24271716604159,0,0,0,0,1.08803560673895,1.7548292581589,1.22538230705385,1.96723578425883,0,0.886068179966986,0.610131324509816,0.625954653532499,1.72022758707021,0.665574309221114,0.745156835296601,1.798532254171,5.37415754237058,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,1.24415452006595,0,0.431299245586727,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0.690359926060101,0,0.977734268540344,0,1.56302802246618,0,0,0,0.202612753855184,1.56215619722769,0,0.253663240775627,0,1.64477330057155,0.992422356778588,0,0.255524855279191,0.535701835878287,0.672567444437648,0,1.13831095675649,1.86274977341542,0,0.514464028312255,0.203909198930495,0.131545547125698,0,1.77970243027311,0.863424021355654,0.471346769748006,0,0.913158720509496,0.215927591218621,0,0.214429632529969,0.316027223465453,0,0,0,0.828864656652147,0.17071847709395,0,1.29068207646083,0,0,0,0,0,0,0,0,0,1.94228651156368,2.05325613712494,0,2.4285549652957,0,0,0,0.11294608203896,0,1.20770274853339,0.231522474323834,0.218559560503957,0.470317296361523,0.490296643507811,0.471353094203252,0.588925401344836,0.594092800654172,0,0,0.281951753939561,0.580120991762195,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0.829169439458779,0.20686599172379,0.639701945702943,0.714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| |||
|short_description=p8@PALMD | |||
}} |
Revision as of 19:45, 10 January 2014
Short description: | p8@PALMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PALMD_5end |
Coexpression cluster: | C2508_mature_skeletal_left_Endothelial_adipose_heart_gastric |
Association with transcript: | -8bp_to_ENST00000263174_5end |
EntrezGene: | PALMD |
HGNC: | 15846 |
UniProt: | Q9NP74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.15e-39 | 24 |
endothelial cell | 5.79e-30 | 36 |
blood vessel endothelial cell | 2.57e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.57e-28 | 18 |
meso-epithelial cell | 8.91e-23 | 45 |
endothelial cell of artery | 5.22e-20 | 9 |
lining cell | 2.27e-16 | 58 |
barrier cell | 2.27e-16 | 58 |
aortic endothelial cell | 2.25e-12 | 6 |
lymphangioblast | 5.43e-12 | 6 |
endothelial cell of lymphatic vessel | 5.43e-12 | 6 |
vascular lymphangioblast | 5.43e-12 | 6 |
vein endothelial cell | 9.18e-12 | 6 |
endothelial cell of umbilical vein | 1.03e-09 | 3 |