FFCP PHASE1:Hg19::chr19:58571939..58571949,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr19:58571939..58571949,- | |||
|id=chr19:58571939..58571949,- | |||
|ontology_enrichment_celltype=CL:0002322!4.82e-11!5;CL:0000039!7.94e-09!7;CL:0000586!7.94e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.50e-75;7!CL:0000586;3.50e-75;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.63e-75,7;CL:0000586,2.63e-75,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.44e-53;10!UBERON:0005564;6.44e-53;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.66e-24;22!DOID:2994;1.66e-24;22!DOID:4556;2.19e-12;3!DOID:3908;5.92e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.51e-24,22;DOID:2994,1.51e-24,22;DOID:4556,2.31e-12,3;DOID:305,3.00e-08,106;DOID:3908,6.13e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-24!115;UBERON:0001049!1.18e-21!57;UBERON:0005068!1.18e-21!57;UBERON:0006241!1.18e-21!57;UBERON:0007135!1.18e-21!57;UBERON:0002780!1.23e-20!41;UBERON:0001890!1.23e-20!41;UBERON:0006240!1.23e-20!41;UBERON:0003080!4.72e-20!42;UBERON:0001893!1.23e-19!34;UBERON:0003075!8.93e-19!86;UBERON:0007284!8.93e-19!86;UBERON:0002616!1.21e-18!59;UBERON:0001869!2.04e-18!32;UBERON:0002791!9.17e-18!33;UBERON:0002346!1.16e-17!90;UBERON:0002020!2.40e-17!34;UBERON:0003528!2.40e-17!34;UBERON:0005743!1.02e-16!86;UBERON:0000473!2.35e-16!8;UBERON:0001017!3.22e-16!82;UBERON:0000955!6.02e-15!69;UBERON:0006238!6.02e-15!69;UBERON:0000073!1.36e-14!94;UBERON:0001016!1.36e-14!94;UBERON:0003056!3.63e-14!61;UBERON:0003135!1.12e-11!11;UBERON:0001950!9.86e-11!20;UBERON:0000956!2.24e-10!25;UBERON:0000203!2.24e-10!25;UBERON:0004121!9.80e-10!169;UBERON:0002619!1.16e-09!22;UBERON:0000924!2.35e-09!173;UBERON:0006601!2.35e-09!173;UBERON:0000153!2.91e-09!129;UBERON:0007811!2.91e-09!129;UBERON:0002308!3.23e-09!9;UBERON:0000125!3.23e-09!9;UBERON:0000200!1.16e-08!6;UBERON:0000369!3.73e-08!4;UBERON:0002435!3.73e-08!4;UBERON:0000204!3.73e-08!4;UBERON:0010082!3.73e-08!4;UBERON:0000033!4.42e-08!123;UBERON:0009663!8.16e-08!7;UBERON:0000991!1.58e-07!21;UBERON:0009196!1.58e-07!21;UBERON:0009117!1.58e-07!21;UBERON:0005564!1.58e-07!21;UBERON:0003101!3.47e-07!22;UBERON:0000079!3.47e-07!22;UBERON:0004176!3.90e-07!22;UBERON:0001871!9.04e-07!7;UBERON:0000922!9.10e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.58e-66;8!UBERON:0003135;3.44e-48;11!UBERON:0000991;1.23e-25;21!UBERON:0003101;1.66e-24;22!UBERON:0000079;1.66e-24;22!UBERON:0000922;5.37e-14;49!UBERON:0002114;2.89e-12;2!UBERON:0002323;1.55e-11;45!UBERON:0003133;1.61e-09;44!UBERON:0002108;7.01e-08;4!UBERON:0002553;1.33e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.12e-66,8;UBERON:0003135,2.86e-48,11;UBERON:0000991,1.12e-25,21;UBERON:0009196,1.12e-25,21;UBERON:0009117,1.12e-25,21;UBERON:0005564,1.12e-25,21;UBERON:0004176,1.51e-24,22;UBERON:0003101,1.51e-24,22;UBERON:0000079,1.51e-24,22;UBERON:0002114,3.24e-12,2;UBERON:0002323,4.39e-12,46;UBERON:0003133,1.32e-11,48;UBERON:0004458,2.22e-11,49;UBERON:0003886,2.23e-10,54;UBERON:0005156,1.52e-09,59;UBERON:0000990,1.52e-09,59;UBERON:0002553,3.00e-09,61;UBERON:0002108,7.49e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,2.11200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0.535701835878287,0,0,0.455324382702595,0,0,0,0.203909198930495,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,1.93778776509765,2.40495664739004,5.05421947441647,1.75495277504663,0.378893491091197,0.803892390468535,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.190941474834495,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:58571939..58571949,- | |||
}} |
Revision as of 01:23, 21 January 2014
Short description: | p@chr19:58571939..58571949, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:58571939..58571949, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.63e-75 | 7 |
germ cell | 2.63e-75 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.12e-66 | 8 |
male reproductive organ | 2.86e-48 | 11 |
gonad | 1.12e-25 | 21 |
indifferent external genitalia | 1.12e-25 | 21 |
indifferent gonad | 1.12e-25 | 21 |
gonad primordium | 1.12e-25 | 21 |
external genitalia | 1.51e-24 | 22 |
male organism | 1.51e-24 | 22 |
male reproductive system | 1.51e-24 | 22 |
duodenum | 3.24e-12 | 2 |
body cavity | 4.39e-12 | 46 |
reproductive organ | 1.32e-11 | 48 |
body cavity or lining | 2.22e-11 | 49 |
body cavity precursor | 2.23e-10 | 54 |
reproductive structure | 1.52e-09 | 59 |
reproductive system | 1.52e-09 | 59 |
anatomical cavity | 3.00e-09 | 61 |
small intestine | 7.49e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.51e-24 | 22 |
germ cell cancer | 1.51e-24 | 22 |
lung large cell carcinoma | 2.31e-12 | 3 |
carcinoma | 3.00e-08 | 106 |
non-small cell lung carcinoma | 6.13e-08 | 5 |