FFCP PHASE1:Hg19::chr19:5352533..5352545,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:5352533..5352545,+ | |||
|id=chr19:5352533..5352545,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.23e-07;1!CL:1000600;2.23e-07;1!CL:0000319;7.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.52e-07,1;CL:1000600,2.52e-07,1;CL:0000319,5.45e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.68e-09;10!UBERON:0007687;2.68e-09;10!UBERON:0009847;3.47e-09;3!UBERON:0003353;3.47e-09;3!UBERON:0008425;3.50e-07;1 | |||
|ontology_enrichment_disease=DOID:162!1.14e-38!235;DOID:14566!4.07e-37!239;DOID:0050687!1.91e-35!143;DOID:305!9.42e-29!106;DOID:0050686!2.88e-14!137;DOID:7!1.04e-09!39;DOID:299!3.61e-08!25;DOID:171!1.50e-07!10;DOID:1749!3.89e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:7;5.96e-09;39!DOID:3112;3.50e-07;1!DOID:1036;3.93e-07;8!DOID:3030;7.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.53e-14,106;DOID:0050687,6.35e-12,143;DOID:162,2.90e-11,235;DOID:14566,6.42e-11,239;DOID:7,1.87e-10,39;DOID:3112,2.84e-07,1;DOID:1036,3.47e-07,8;DOID:3030,5.45e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.51e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.23e-07;1!UBERON:0001256;2.23e-07;1!UBERON:0001259;2.23e-07;1!UBERON:0007195;7.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.52e-07,1;UBERON:0001256,2.52e-07,1;UBERON:0001259,2.52e-07,1;UBERON:0007195,9.18e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0.560677600142307,0,0,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.600182192168805,0.206105058476878,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.487894824518382,0.132529768321485,0,0.207322110030741,0,1.09493207722749,0,0,0,0,0.721879481669586,0.473227200159376,0,0.241011029883482,0.330881918197182,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.348631135379878,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0.980160863924127,0,0.865615277858669,0.426851060090485,0.478278818186467,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,1.98895302764489,0,0,0,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0.359473404589307,0,0,0,0,1.11136990144637,0,0,0,0,2.0115799999125,0,3.18621655199399,0.508507300585533,0,0,0.291604613383254,0,0,0,0,0,0,0,1.30726156222788,0.139423744278603,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0.31396051279005,0,0,0,0,3.98482838720789,1.58936578980379,0,1.46909527343233,5.79547592879157,0.216388639742091,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0.19566461893209,2.42780379534093,0,0,0,0,1.65355761355942,0.103688191397247,0,0.330991955875499,0,0,0.569219092059585,0,0.867798691675654,0,2.43765778425127,0,0.171986032471617,0.290268993867255,0.0730893170861856,0.0821154570532092,0,0,0,0.274083849293502,0.794858446811959,0,0.195551382734803,0.480952921509202,0,0.19980960958213,0.576361668616424,0.458146384663663,0,2.16082196982225,0.248505071130865,0,0.271808412147228,0.523014231561666,3.36594118199862,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.492137407573744,0.0846733320657845,0,0,1.28602518772015,0.962776056180637,2.49264202817511,0,0,0,0,0,0,0.316801009558219,0.537862017998534,0,0,0,2.034148301238,0,0,0,0,3.52997839222158,0.511164065356265,0.566560457600628,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0.314108192500469,0,0,0,0,0,0,0.415045904808692,0.249960815924213,4.09452617362449,0,0.705797459094515,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0.621051827505038,0,0,0,0,0.761610424337591,1.22061219961398,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0.385239660814607,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0.38582807654183,0.337884881306145,0.512483037175893,0,0,0,0,0,0,0,1.72041036127604,0.422624246717254,0,0.213383459388282,0,0,0,0,0,0.255788742607303,0.215649622793364,4.560712313821,0.109209638192014,0.169732529954025,0.850299680406731,0.123935764259002,0.558644917973244,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0.490738592505128,1.41563668017288,0.183428598521679,0.462102664601353,0.381382095467167,0,2.18807844327902,0,0,0,0,2.45657876265145,0.739280431085226,0,0,0,0,0,0,0,0.175871244359621,1.02209942111676,0,0,0,0,0,0.230467975111559,0,0,0.0657727735628491,4.37317211270682,5.22787588892725,0,0,0,0,1.07963795609311,0,0,0,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0,0,0.4582137370881,0,1.91107787795487,0,0,0.243835849964539,0,0,0,0,0,0.795803100645473,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0.378499274505237,1.42045243552804,0.126698501011437,0.203977659483963,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,3.01192093860606,0,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p@chr19:5352533..5352545,+ | |||
}} |
Revision as of 20:45, 20 January 2014
Short description: | p@chr19:5352533..5352545, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:5352533..5352545, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.52e-07 | 1 |
lower urinary tract cell | 2.52e-07 | 1 |
mucus secreting cell | 5.45e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.52e-07 | 1 |
wall of urinary bladder | 2.52e-07 | 1 |
mucosa of urinary bladder | 2.52e-07 | 1 |
stroma of bone marrow | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.53e-14 | 106 |
cell type cancer | 6.35e-12 | 143 |
cancer | 2.90e-11 | 235 |
disease of cellular proliferation | 6.42e-11 | 239 |
disease of anatomical entity | 1.87e-10 | 39 |
papillary adenocarcinoma | 2.84e-07 | 1 |
chronic leukemia | 3.47e-07 | 8 |
mucinous adenocarcinoma | 5.45e-07 | 1 |