FFCP PHASE1:Hg19::chr19:49149405..49149459,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=770 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1370 | |||
|TSSclassifier=strong | |||
|UniProt=O75493 | |||
|association_with_transcript=0bp_to_ENST00000084798,NM_001217,uc002pjz.1_5end | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_2_at_CA11_5end | |||
|id=chr19:49149405..49149459,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.91e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.48e-33!94;UBERON:0001016!2.48e-33!94;UBERON:0005743!6.44e-32!86;UBERON:0001017!4.32e-30!82;UBERON:0007023!2.42e-28!115;UBERON:0000955!5.77e-25!69;UBERON:0006238!5.77e-25!69;UBERON:0002346!6.95e-25!90;UBERON:0001049!1.10e-24!57;UBERON:0005068!1.10e-24!57;UBERON:0006241!1.10e-24!57;UBERON:0007135!1.10e-24!57;UBERON:0002616!1.14e-24!59;UBERON:0003075!1.21e-24!86;UBERON:0007284!1.21e-24!86;UBERON:0000924!6.41e-21!173;UBERON:0006601!6.41e-21!173;UBERON:0004121!1.87e-20!169;UBERON:0002780!6.95e-20!41;UBERON:0001890!6.95e-20!41;UBERON:0006240!6.95e-20!41;UBERON:0003080!7.53e-19!42;UBERON:0003056!4.29e-17!61;UBERON:0000033!1.22e-16!123;UBERON:0000153!1.30e-16!129;UBERON:0007811!1.30e-16!129;UBERON:0001893!6.17e-16!34;UBERON:0002020!7.10e-16!34;UBERON:0003528!7.10e-16!34;UBERON:0002791!2.81e-15!33;UBERON:0001869!8.20e-15!32;UBERON:0002619!4.60e-12!22;UBERON:0001950!9.63e-11!20;UBERON:0000956!1.87e-10!25;UBERON:0000203!1.87e-10!25;UBERON:0002420!2.72e-07!9;UBERON:0007245!2.72e-07!9;UBERON:0010009!2.72e-07!9;UBERON:0010011!2.72e-07!9;UBERON:0000454!2.72e-07!9;UBERON:0002308!3.45e-07!9;UBERON:0000125!3.45e-07!9;UBERON:0003076!4.85e-07!15;UBERON:0003057!4.85e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.59e-22;41!UBERON:0001890;1.59e-22;41!UBERON:0001893;8.93e-22;34!UBERON:0000073;2.46e-21;53!UBERON:0002616;2.46e-21;53!UBERON:0003528;1.03e-20;34!UBERON:0002020;1.03e-20;34!UBERON:0001869;1.20e-20;32!UBERON:0002791;1.45e-20;32!UBERON:0001017;1.79e-19;75!UBERON:0002619;5.57e-19;22!UBERON:0001950;8.38e-17;20!UBERON:0000955;2.97e-16;68!UBERON:0001016;4.67e-16;83!UBERON:0000956;7.16e-16;25!UBERON:0000203;7.16e-16;25!UBERON:0002420;5.29e-11;9!UBERON:0007245;5.29e-11;9!UBERON:0010009;5.29e-11;9!UBERON:0010011;5.29e-11;9!UBERON:0000454;5.29e-11;9!UBERON:0000125;7.86e-11;9!UBERON:0002308;7.86e-11;9!UBERON:0007023;1.74e-10;114!UBERON:0011216;5.13e-09;132!UBERON:0009663;6.03e-09;7!UBERON:0000200;2.21e-08;6!UBERON:0001894;8.54e-08;7!UBERON:0004732;1.02e-07;13!UBERON:0002298;3.06e-07;6!UBERON:0004733;3.09e-07;12!UBERON:0002028;3.09e-07;12!UBERON:0000349;4.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.36e-49,89;UBERON:0001017,3.71e-48,81;UBERON:0001049,5.72e-40,56;UBERON:0005068,5.72e-40,56;UBERON:0006241,5.72e-40,56;UBERON:0007135,5.72e-40,56;UBERON:0000955,3.91e-39,68;UBERON:0006238,3.91e-39,68;UBERON:0007023,3.23e-38,114;UBERON:0000073,1.88e-37,53;UBERON:0002616,1.88e-37,53;UBERON:0002346,3.66e-34,86;UBERON:0003075,8.27e-34,82;UBERON:0007284,8.27e-34,82;UBERON:0002780,1.65e-31,41;UBERON:0001890,1.65e-31,41;UBERON:0003080,1.65e-31,41;UBERON:0006240,1.65e-31,41;UBERON:0004121,2.93e-31,171;UBERON:0000924,2.93e-31,171;UBERON:0006601,2.93e-31,171;UBERON:0003056,4.25e-28,61;UBERON:0011216,8.09e-26,223;UBERON:0010371,3.41e-25,104;UBERON:0001893,5.31e-25,34;UBERON:0003528,6.70e-25,34;UBERON:0002020,6.70e-25,34;UBERON:0001869,3.76e-23,32;UBERON:0002791,5.43e-23,32;UBERON:0010314,1.51e-19,132;UBERON:0002619,4.01e-19,22;UBERON:0001950,6.06e-17,20;UBERON:0000956,5.40e-16,25;UBERON:0000203,5.40e-16,25;UBERON:0002420,5.49e-11,9;UBERON:0007245,5.49e-11,9;UBERON:0010009,5.49e-11,9;UBERON:0010011,5.49e-11,9;UBERON:0000454,5.49e-11,9;UBERON:0000125,8.11e-11,9;UBERON:0002308,8.11e-11,9;UBERON:0003076,1.54e-09,15;UBERON:0003057,1.54e-09,15;UBERON:0009663,6.55e-09,7;UBERON:0000200,2.30e-08,6;UBERON:0000025,3.29e-08,192;UBERON:0001894,5.39e-08,7;UBERON:0006222,5.39e-08,7;UBERON:0004732,9.03e-08,13;UBERON:0004111,1.93e-07,240;UBERON:0002298,2.76e-07,6;UBERON:0004733,2.90e-07,12;UBERON:0002028,2.90e-07,12;UBERON:0007277,2.90e-07,12;UBERON:0000349,4.51e-07,5;UBERON:0000922,5.83e-07,592 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,2.35156070624089,2.65117900582333,0,0,0,0,0,0.204000691244253,0.940364164434263,0,0.273748850145768,0.251085279189606,0,0,0.0787107813136792,0,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0.426507697462265,0,0,0.200544447470142,0.868043482863407,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0.863077176966451,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0.800791974072025,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,1.180258620683,1.17903228824749,0.411202997999018,0.83593247695339,0,0.946895611469467,0,0.445641827540694,0.883817722424512,0.664601683750863,1.08321545506006,0.384273959177026,0.390178042679635,0.986627427622057,0,1.44901542867526,0.296573126324121,0.267540828089713,0,0.226618685395132,0,2.06176467289578,0.759059076058509,0.95569624297229,0,1.90090408889675,0.451725357233318,1.15187950038977,0,1.18388626022008,2.46338399076314,0.80642697289893,1.33720097891754,1.44824403882799,0,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0.795285947051099,0,3.78139268656271,1.10864698731282,2.89854792787316,7.7932549921139,0.728590576585084,0,0,0,0.132957960518865,0.476981248610684,0,0.74291500265913,0,0.860234595106124,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,2.28081631715554,1.46437234528902,0,0.81014194788176,0.17859945656816,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0.872188104285069,0,0,0,0,0.354668382198357,1.12135520028461,0,0.49333509683432,0.933633106199299,0,0.326923806226917,4.23800797405808,1.72852777344,0.234321431833797,0,0,0.298897361103602,0,0.161872944368132,0,0.61246251376468,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,7.9282908984237,7.81925633096763,8.24976994373581,3.52447587052259,6.30802127189071,7.2995471815166,0,0.643240938192885,0,0,0,0.591534000199219,0.168584690078102,0,0.330881918197182,0,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0,1.40241773803446,1.6462960453256,1.47008711385542,0,0,0,0.882926198829301,1.35287282397425,0.857839051492628,0.109750285408626,1.1240175325762,0,1.38882667737794,0,0,0,4.75314660397815,0.939269553886573,1.29929802984966,0,0.380508304469197,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.425325291727159,0,0,0,0.492663237895943,0.352193736052904,0,0.288239906833923,0.6312121671319,0.190493682876507,0.763976851116555,1.17217447210047,0,0.411309970813294,0.300343057843917,1.42913216315289,0.784917590417525,3.05172048183296,0.2933531432838,0,0,0,1.86156681609409,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,1.29964888536674,1.2162378064119,0,0,0,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0.112085143993527,0.985153801009636,0,0.641715181398742,1.27047312111232,1.30139853857622,2.31986643833309,2.68026024534958,0,0,0,0.414415513436035,1.10422342547226,1.50051156317903,0,0.415941723061614,0,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,0.173767228936166,13.3144787074664,5.14715135716284,0.620304078368662,0.431428401637234,0.640365346820666,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,1.81289174387433,0,0.276242966807689,0,0,0.131124414959424,0.451199612907412,0.616122696835318,0.784349769176855,0,0.316654886678627,0,0,0,0,1.89662506280697,3.01013864312912,0.254876273045038,0,0,0.219259876645935,0,2.3080511260475,5.24823433119529,0.976135183992909,0.309123034943167,0.457847324091717,0.330037999682352,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0,0,0.751941714077915,0.290033387828457,0.0852266274161009,0.979352392114111,0.165284915360978,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0.18532421910392,0,2.97726695487734,1.2655176988749,0.38126038784765,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,1.73632660280006,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.384888450902048,0.670302275535787,0,0.847294206991012,0,0,1.33029046061003,0.229723400206959,1.52234282769651,0,0,0.238231775457789,0.822724546172388,0,0,0.79312517629427,14.5280736733363,5.77487913158015,0,0,0.577076851905779,0.569134746787313,0.159426272728822,0,0.191505370132367,0.211673582723883,0.649243880549111,0.561594356226918,0,0,0,0.338583555603207,0,0.201799707191048,0,0.687010689511529,0,0,0.166849141711909,0.390776190804081,0.278406173895242,2.46174797895425,0,0,0,0,0.439524537815682,7.40299182672032,0.334330152832435,0.284136146806413,0,0.890894042497916,0,5.96488588659779,85.8083440104128,0.667852230137435,0.988823245360557,4.43363357068786,0.597743964753209,1.65770349318689,0.755798243562828,2.76125442755818,0.123084805461069,0,0,0,0,2.17015492401254,0,0,11.6319929531426,30.5207042952491,0,0.260427761085233,0.787139999965761,0,0.341380344856499,1.5255219017566,2.36387681767936,0.689486746482929,3.2076507472158,1.56262495439963,14.1718621730214,55.2331688904368,12.2065389053667,65.7946596590786,22.4616190404696,41.4638400621008,1.41620002574687,1.81250867562184,5.00176680274681,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.366390373607449,0,0,1.72678282034527,1.16348177330109,0.225595660617181,0,0,0,0.158936578980379,1.47698645169619,0.326465616318295,0.706765357169704,1.08194319871046,0,1.50377859655677,1.22206028986725,0,0.247127877893006,0.417687798021821,7.21192122893244,0,16.3985112007737,0.182454789215666,1.9566461893209,2.91336455440911,1.97292201424695,0,1.83643656978294,3.6648216184523,0.751617097072463,0.933193722575224,0,0,0.627865836814451,0,3.41531455235751,2.08012009519708,1.04135843001079,1.37189356380129,0.0870592065804026,1.39781334593624,1.71986032471617,0.290268993867255,0.438535902517113,0.328461828212837,1.93978032976839,20.6519336458111,0.90392296312213,0,0,28.9330337518366,1.95551382734803,0.160317640503067,1.70762395791482,0.19980960958213,1.15272333723285,5.72682980829578,0.514784993585894,0,2.85780831800495,0.942776138467182,0.951329442515298,1.255234155748,0.101998217636322,0,3.60252173225874,18.3453207715271,0,0.859530882839914,0.262887354279314,1.95497680890578,0.687481272035051,0.717873024576814,0.399358000997982,0.429226048136571,0.669514372325618,0.739018197353989,0,0,0,0,0.0674035438541849,1.08270229666224,0.423366660328922,12.7236750369489,67.2844826191184,5.62636019627567,9.90283943500083,6.23160507043778,0.899895566206002,0,36.874980891421,0,2.28536551167675,1.78345599658994,2.53440807646576,0.717149357331379,0.191915197319445,0,0,5.085370753095,0.542999601753713,0,0.326587360109409,0,0.574647645245373,0.170388021785422,0.79318464064088,0.293104467356165,0,5.81773303626977,12.9587949707836,1.88195521672762,0.704815022316672,0.854299300541557,0.471612915298998,0,0,0.790446527591777,0,0,0.544017803369474,0,0,0,3.45519011750515,9.74674997963685,17.0836770862748,69.8565393342269,2.86704597845036,13.533344287496,9.12817123238337,1.66018361923477,0.124980407962107,0,0.856396000634902,0,6.08835377548946,2.60857851499485,0,0,0,1.32582103692562,1.25783950876288,0,0.228840068396924,0.907385542579434,0.310874401165561,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0.385239660814607,9.86431320324658,0,0.226705925512272,0,0,0,0.308801447160972,0.877136198314828,0,0.771656153083659,0,0.256241518587947,0.345430341731199,0,78.3925332980313,0.584580926518165,0.265729680626726,0.327130788511688,0.655219697692825,0,0.211312123358627,0,0.213383459388282,0,0,0,0.559518030877778,0.622077260032973,9.71997221907753,0.215649622793364,3.61711666268562,7.31704575886493,0,4.25149840203366,7.56008161979913,4.46915934378595,0,0,8.80627823114017,0,0,32.0503833231333,9.91876034279095,58.4259924149174,15.9990764107789,0.504143392443436,32.9188521729677,42.9525217380724,1.42769420259154,1.17777262201231,0.11796972334774,1.28400018965175,0,0,0,0,6.16724692463909,0.20170506870352,0,0,0.49131575253029,0.147856086217045,28.4333231243441,10.9350933805939,65.106340897873,30.1225098421057,0,0,0,0.351742488719241,0.638812138197976,13.3925458969572,10.4247953887835,1.82089681270989,2.95960848756687,0.354809480650555,0,0,11.0110967422467,33.0179323285502,0.590969204419841,0.111231401892069,2.59027206406696,36.9221636302604,0.280272163313789,0,0.431855182437243,0.47775168788705,6.43288897589907,1.89616334079272,15.3438681485925,1.21700790611806,0,0.414432328326074,1.87790324803345,4.14755797088455,2.58136415292167,0.473328002922261,0.426067023795788,1.27016115057279,0,0,0,0.559277158988962,0,0.121917924982269,1.29485767437579,0.205325613712494,0,0.485710993059139,1.16969731731053,12.5338988351662,0.83244063544298,0.22589216407792,0.549702583727146,10.2654733625338,1.08043821351123,0,1.41095188908457,1.22574160876953,4.71353094203252,4.12247780941385,7.12911360785006,2.113278637917,0,0.469919589899268,0.322289439867886,0,0.178553938605658,0,0.0802413666891683,0.730336388246517,0,7.02363957442111,6.31086248772738,31.888008899539,2.18175345170189,0.5290268405154,0,0,0,4.66815771889792,0.109265571963696,6.8417190546176,0.101988829741982,0,0.643264296743914,0.250707539292375,1.06090177505535,0,5.80418607621146,22.1346611144456,0.852935927603924,0.23806443146374,0.968833647540092,1.24149428591716,0.224263725161227,1.78212043178862,0,1.30630048738177,0,1.27968900727716,1.14755528628282,0.332660356546013,0.0814032686109745,1.06727345877715,3.8614456457388,0.0898252021065869,0,3.78948476966886,0.813792356631477,0.665756774185513,1.40891655513718,0 | |||
|short_description=p2@CA11 | |||
}} |
Revision as of 00:20, 21 January 2014
Short description: | p2@CA11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CA11_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 0bp_to_ENST00000084798, NM_001217, uc002pjz.1_5end |
EntrezGene: | CA11 |
HGNC: | 1370 |
UniProt: | O75493 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data