FFCP PHASE1:Hg19::chr19:48233474..48233498,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:48233474..48233498,- | |||
|id=chr19:48233474..48233498,- | |||
|ontology_enrichment_celltype=CL:0000066!1.70e-20!254;CL:0000039!4.04e-07!7;CL:0000586!4.04e-07!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.63e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008425;6.02e-09;1!UBERON:0000358;9.10e-09;1 | |||
|ontology_enrichment_disease=DOID:305!5.31e-25!106;DOID:162!1.36e-17!235;DOID:0050687!1.78e-17!143;DOID:14566!1.31e-16!239;DOID:299!1.25e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.57e-17;4!DOID:1612;8.57e-17;4!DOID:299;7.70e-10;25!DOID:178;9.10e-09;1!DOID:326;9.10e-09;1!DOID:3978;9.10e-09;1!DOID:3394;9.10e-09;1!DOID:5844;9.10e-09;1!DOID:3111;2.37e-08;1!DOID:3603;2.37e-08;1!DOID:305;7.52e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.57e-17,4;DOID:1612,5.57e-17,4;DOID:305,2.69e-16,106;DOID:0050687,8.61e-13,143;DOID:162,1.12e-10,235;DOID:14566,2.27e-10,239;DOID:299,6.09e-10,25;DOID:178,9.46e-09,1;DOID:326,9.46e-09,1;DOID:3978,9.46e-09,1;DOID:3394,9.46e-09,1;DOID:5844,9.46e-09,1;DOID:3111,1.48e-08,1;DOID:3603,1.48e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0008947!3.25e-09!38;UBERON:0003258!3.25e-09!38;UBERON:0001737!4.98e-09!9;UBERON:0000064!2.65e-08!219;UBERON:0005153!4.52e-08!37;UBERON:0000065!1.07e-07!53;UBERON:0001048!2.27e-07!168;UBERON:0004119!3.31e-07!169;UBERON:0000925!3.31e-07!169;UBERON:0006595!3.31e-07!169;UBERON:0001007!6.15e-07!155;UBERON:0001555!6.15e-07!155;UBERON:0007026!6.15e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;5.15e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.37e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.487894824518382,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.661763836394364,0.871517776369625,0.71181185733329,0.674156540800822,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0.184161977871793,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,1.00337954770971,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.144269212976445,0,0.318852545457645,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,2.81974010175699,0.18714054040822,0,0.485442086998054,0,0,0.95497793895076,0,0,0,0.140669416410513,0,0,1.05562704063997,0,0,0,0,0,0,0.539210106883961,2.68531762013414,0,0.0986434056369336,0,0,0,0.278304294485554,0,1.30213880542617,3.41093999985163,0,0.910347586283997,2.2882828526349,1.18193840883968,0,0,0,0,0.361789315876224,0,0.774054819518572,0.886642856860642,0,0.10893846351899,2.23077990845765,0.153900517007594,0,0.23056390438806,0.179515288819544,1.3037684630641,0,0,0,0,0.31396051279005,0,0.225595660617181,0,0,0.189753732724185,0,0.421996129056054,0,0.565412285735763,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,2.54364004611717,0,0.394584402849391,0,0,0,2.55549813004637,0.829505531177977,0,0.330991955875499,0,0,0,0,5.20679215005393,0.195984794828755,0.870592065804026,0,0.51595809741485,0.387025325156341,0.292357268344742,0.410577285266046,0.0969890164884194,0,0,0,0,0,1.17330829640882,0.160317640503067,0,0.19980960958213,0.144090417154106,0.229073192331831,0,0,0,0.235694034616795,0.815425236441684,0.418411385249333,0,0,0,0.136905378891993,0,0,0,0,0,0,2.39614800598789,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.767660789277781,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0,0.855434189421647,1.40963004463334,0.213574825135389,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,1.07220795687463,1.30497145982606,0.226705925512272,0.926089897295336,0.244736704506468,0.71635536432595,0.308801447160972,0.438568099157414,0,0.192914038270915,0.337884881306145,0,1.38172136692479,0,0.276516872303462,0,0,0.327130788511688,0,0,1.69049698686902,0,0.106691729694141,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0.471878893390961,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0.261906694481422,0.655087670040387,0.591424344868181,0.0675375846183947,0,1.03343398250592,0.19024743058172,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0.203909198930495,0.328863867814245,1.53651993149159,0.111231401892069,0,0,0.280272163313789,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,2.06196181689645,0,0,0,0.196300467230486,0.609589624911347,0.647428837187895,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.160482733378337,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.203977659483963,0.534434810531121,2.57305718697566,0.5014150785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| |||
|short_description=p@chr19:48233474..48233498,- | |||
}} |
Revision as of 00:13, 21 January 2014
Short description: | p@chr19:48233474..48233498, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48233474..48233498, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.63e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
breast | 4.37e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.57e-17 | 4 |
breast cancer | 5.57e-17 | 4 |
carcinoma | 2.69e-16 | 106 |
cell type cancer | 8.61e-13 | 143 |
cancer | 1.12e-10 | 235 |
disease of cellular proliferation | 2.27e-10 | 239 |
adenocarcinoma | 6.09e-10 | 25 |
vascular disease | 9.46e-09 | 1 |
ischemia | 9.46e-09 | 1 |
extrinsic cardiomyopathy | 9.46e-09 | 1 |
myocardial ischemia | 9.46e-09 | 1 |
myocardial infarction | 9.46e-09 | 1 |
cystadenocarcinoma | 1.48e-08 | 1 |
mucinous cystadenocarcinoma | 1.48e-08 | 1 |