FFCP PHASE1:Hg19::chr19:41712456..41712471,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:41712456..41712471,+ | |||
|id=chr19:41712456..41712471,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.05e-12!254;CL:0002076!3.60e-10!43;CL:0000223!8.01e-09!59;CL:0002322!6.55e-08!5;CL:0002368!1.37e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.00e-29;5!CL:0000039;1.21e-13;7!CL:0000586;1.21e-13;7!CL:0002593;2.55e-12;2!CL:0002595;8.90e-11;5!CL:0002321;9.11e-10;15!CL:0000540;2.49e-09;6!CL:0000404;2.49e-09;6!CL:0002379;1.54e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.30e-30,5;CL:0000039,1.71e-13,7;CL:0000586,1.71e-13,7;CL:0002593,4.82e-12,2;CL:0000047,5.38e-12,8;CL:0002595,8.64e-11,5;CL:0000540,1.72e-09,6;CL:0000031,1.72e-09,6;CL:0000404,1.72e-09,6;CL:0002379,1.55e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;2.49e-09;6!UBERON:0006242;5.44e-07;1 | |||
|ontology_enrichment_disease=DOID:305!7.50e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3620;1.54e-07;1!DOID:3565;1.54e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.55e-07,1;DOID:3565,1.55e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!9.89e-12!129;UBERON:0004185!9.89e-12!129;UBERON:0004119!1.44e-11!169;UBERON:0000925!1.44e-11!169;UBERON:0006595!1.44e-11!169;UBERON:0001007!1.59e-10!155;UBERON:0001555!1.59e-10!155;UBERON:0007026!1.59e-10!155;UBERON:0000065!2.68e-08!53;UBERON:0000077!1.74e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.55e-12;2!UBERON:0003834;8.90e-11;5!UBERON:0001533;8.90e-11;5!UBERON:0000922;7.19e-08;49!UBERON:0003513;7.85e-08;7!UBERON:0000473;3.21e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,4.82e-12,2;UBERON:0003834,8.64e-11,5;UBERON:0001533,8.64e-11,5;UBERON:0003513,7.69e-08,7;UBERON:0000473,3.33e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,1.00272223735071,0,0,0,0,0.436194716338694,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,3.41526377162867,2.12047629314376,2.5562667431294,1.7622379352613,2.77552935963191,1.09493207722749,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.55146986366197,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.860919069801795,0.343135620597051,0.658501712451753,1.1240175325762,0.201057944823262,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0.743155811443641,0,0.16798212819886,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,1.00253235151642,0.460404944679482,0.918515585316854,0.182091168006717,0.131124414959424,0,0,0,0,0.211103257785751,1.13733384070897,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,5.20048196829217,0,0,0,0,0,0,0,0,0,0.495854746082934,0.384380134730212,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0.117812402345686,0,1.58510321173008,0,0,1.21856744815642,1.05650146756755,0,1.27264888758341,0,0,1.99031692572366,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0.577332676353072,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0.500547425135725,0,0,0,0.270455678475983,0,0,0.37428108081644,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.455173793141999,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0,0,0,1.08647371922008,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.652931232636591,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,2.41981432097328,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0,0,0,0,1.70762395791482,1.19885765749278,0.288180834308212,0,0,0,0,0,0.135904206073614,0,0.305994652908965,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,1.28602518772015,1.92555211236127,9.55512777467126,1.349843349309,0,0,0.670869375198532,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.679872549120754,0.146552233678082,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0.124980407962107,0,0,6.35217713185063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0.617602894321944,0.219284049578707,0.353378291891762,0,0,0,0,0,0,1.7537427795545,0.398594520940089,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.495743057036009,0,0,0,0,0,0.6124909547064,0,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0.795803100645473,0,0,0.109940516745429,0,0.771741581079447,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,1.5870805215462,0,0,0,0.504665699340316,0.874124575709564,0,1.22386595690378,2.13773924212448,0.918948995348449,5.0141507858475,0,0,0,0.103432995861895,0.852935927603924,0.23806443146374,0,0,0,0,0,1.08858373948481,0.342233301085281,0.471464371102113,0.0717222053926763,0.99798106963804,0.0814032686109745,0,0,0.718601616852695,0,0,0,0,0,0 | |||
|short_description=p@chr19:41712456..41712471,+ | |||
}} |
Revision as of 23:24, 20 January 2014
Short description: | p@chr19:41712456..41712471, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41712456..41712471, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.30e-30 | 5 |
germ line cell | 1.71e-13 | 7 |
germ cell | 1.71e-13 | 7 |
smooth muscle cell of the internal thoracic artery | 4.82e-12 | 2 |
neuronal stem cell | 5.38e-12 | 8 |
smooth muscle cell of the subclavian artery | 8.64e-11 | 5 |
neuron | 1.72e-09 | 6 |
neuroblast | 1.72e-09 | 6 |
electrically signaling cell | 1.72e-09 | 6 |
meningothelial cell | 1.55e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 4.82e-12 | 2 |
thoracic segment blood vessel | 8.64e-11 | 5 |
subclavian artery | 8.64e-11 | 5 |
trunk blood vessel | 7.69e-08 | 7 |
testis | 3.33e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.55e-07 | 1 |
meningioma | 1.55e-07 | 1 |