FFCP PHASE1:Hg19::chr19:36632333..36632351,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr19:36632333..36632351,+ | |||
|id=chr19:36632333..36632351,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.26e-19!254;CL:0002076!1.46e-11!43;CL:0002368!1.46e-11!13;CL:0002202!5.16e-10!9;CL:0002632!5.16e-10!9;CL:0002321!7.06e-09!248;CL:0002322!9.51e-09!5;CL:0002159!1.53e-08!13;CL:0000220!5.67e-08!246;CL:0002077!1.04e-07!33;CL:0000223!1.26e-07!59;CL:1000449!3.39e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.32e-21;5!CL:0002202;1.25e-17;9!CL:0002632;1.25e-17;9!CL:0002368;3.70e-12;13!CL:0002166;9.48e-10;3!CL:0000322;1.70e-09;3!CL:0002328;1.70e-09;3!CL:0002621;1.70e-09;3!CL:0002581;9.69e-08;1!CL:0002321;4.27e-07;15!CL:1000449;5.32e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.90e-21,5;CL:0002202,9.46e-18,9;CL:0002632,9.46e-18,9;CL:0002368,3.07e-12,13;CL:0002621,9.30e-10,3;CL:0002328,9.72e-10,3;CL:0002166,1.16e-09,3;CL:0000322,1.86e-09,3;CL:0002076,1.09e-08,42;CL:0002581,7.97e-08,1;CL:0000223,1.46e-07,58;CL:0002321,4.87e-07,250;CL:1000449,5.87e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!1.92e-10!44;UBERON:0001008!4.55e-10!45;UBERON:0004211!3.39e-07!16;UBERON:0001285!3.39e-07!16;UBERON:0007684!3.39e-07!16;UBERON:0003220!3.39e-07!16;UBERON:0004208!3.39e-07!16;UBERON:0002113!7.01e-07!27;UBERON:0003918!7.01e-07!27;UBERON:0005095!7.01e-07!27;UBERON:0007687!7.01e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.64e-10;15!UBERON:0001558;1.64e-10;15!UBERON:0004807;5.68e-10;22!UBERON:0004821;1.70e-09;3!UBERON:0007499;1.70e-09;3!UBERON:0004815;1.70e-09;3!UBERON:0003215;1.70e-09;3!UBERON:0010368;1.70e-09;3!UBERON:0009911;1.70e-09;3!UBERON:0002299;1.70e-09;3!UBERON:0002031;1.70e-09;3!UBERON:0001949;1.70e-09;3!UBERON:0006524;1.70e-09;3!UBERON:0008874;1.70e-09;3!UBERON:0002169;1.70e-09;3!UBERON:0004894;1.70e-09;3!UBERON:0005911;9.55e-09;36!UBERON:0001708;1.61e-07;4!UBERON:0008895;1.61e-07;4!UBERON:0009856;2.50e-07;4!UBERON:0006555;5.32e-07;15!UBERON:0000353;5.32e-07;15!UBERON:0004819;5.32e-07;15!UBERON:0001285;5.32e-07;15!UBERON:0007684;5.32e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.39e-10,15;UBERON:0001558,1.39e-10,15;UBERON:0001949,9.30e-10,3;UBERON:0004815,9.72e-10,3;UBERON:0002031,9.72e-10,3;UBERON:0004821,1.86e-09,3;UBERON:0003215,1.86e-09,3;UBERON:0010368,1.86e-09,3;UBERON:0009911,1.86e-09,3;UBERON:0002299,1.86e-09,3;UBERON:0006524,1.86e-09,3;UBERON:0008874,1.86e-09,3;UBERON:0002169,1.86e-09,3;UBERON:0004894,1.86e-09,3;UBERON:0004807,7.38e-08,28;UBERON:0001708,1.87e-07,4;UBERON:0008895,1.87e-07,4;UBERON:0004211,5.87e-07,15;UBERON:0009773,5.87e-07,15;UBERON:0001231,5.87e-07,15;UBERON:0001285,5.87e-07,15;UBERON:0007684,5.87e-07,15;UBERON:0004208,5.87e-07,15;UBERON:0000353,6.47e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.47901604066715,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,3.07800827419625,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0.366403487860815,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,1.54608682530637,0.545492241181669,1.72082757233402,2.07355300420312,1.45782745153634,1.51052125730374,0.932949495138334,1.00928340350251,1.09493207722749,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.768251997860379,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,2.51973192298289,1.27597587518148,0.179117045405697,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0,0,0.601519410909855,1.19705285616665,0,0,0,1.35359883872224,0.924184045252977,1.56869953835371,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,1.01950509218015,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0,0.206082023295445,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,0,0.532306030317022,0,1.11194531462352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0,2.58303223602738,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0.344743373241465,0,0,0,0,0,0,0,0,0,4.1827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0.694238953340524,0.293977192243133,0.34823682632161,0,0.51595809741485,0,0.219267951258557,0,0,0.353024506766001,0,0,0,0,0.195551382734803,0,0,0,0,0.458146384663663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,1.76828463311521,0.962776056180637,1.66176135211674,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0,0,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0.428859265059938,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57333409808316,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,0.352894871715692,0,0,0,0,0,0,0.872701380680755,0,0,0,0.432626562123789,0,0.109265571963696,0,0.61193297845189,0.534434810531121,0.0918948995348449,0.250707539292375,10.1543455612441,11.5224575967157,0,0,0,0,0,0,0,0,0,0,0,0.471464371102113,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:36632333..36632351,+ | |||
}} |
Revision as of 22:58, 20 January 2014
Short description: | p@chr19:36632333..36632351, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36632333..36632351, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.90e-21 | 5 |
epithelial cell of tracheobronchial tree | 9.46e-18 | 9 |
epithelial cell of lower respiratory tract | 9.46e-18 | 9 |
respiratory epithelial cell | 3.07e-12 | 13 |
gingival epithelial cell | 9.30e-10 | 3 |
bronchial epithelial cell | 9.72e-10 | 3 |
epithelial cell of Malassez | 1.16e-09 | 3 |
pneumocyte | 1.86e-09 | 3 |
endo-epithelial cell | 1.09e-08 | 42 |
perirenal preadipocyte | 7.97e-08 | 1 |
endodermal cell | 1.46e-07 | 58 |
embryonic cell | 4.87e-07 | 250 |
epithelial cell of nephron | 5.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.39e-10 | 15 |
lower respiratory tract | 1.39e-10 | 15 |
gingival epithelium | 9.30e-10 | 3 |
lower respiratory tract epithelium | 9.72e-10 | 3 |
epithelium of bronchus | 9.72e-10 | 3 |
pulmonary alveolus epithelium | 1.86e-09 | 3 |
alveolus | 1.86e-09 | 3 |
pulmonary lobule | 1.86e-09 | 3 |
lobule | 1.86e-09 | 3 |
alveolus of lung | 1.86e-09 | 3 |
alveolar system | 1.86e-09 | 3 |
pulmonary acinus | 1.86e-09 | 3 |
alveolar sac | 1.86e-09 | 3 |
alveolar wall | 1.86e-09 | 3 |
respiratory system epithelium | 7.38e-08 | 28 |
jaw skeleton | 1.87e-07 | 4 |
splanchnocranium | 1.87e-07 | 4 |
nephron epithelium | 5.87e-07 | 15 |
renal tubule | 5.87e-07 | 15 |
nephron tubule | 5.87e-07 | 15 |
nephron | 5.87e-07 | 15 |
uriniferous tubule | 5.87e-07 | 15 |
nephrogenic mesenchyme | 5.87e-07 | 15 |
parenchyma | 6.47e-07 | 15 |