FFCP PHASE1:Hg19::chr19:36370032..36370046,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1050 | |||
|description=CAGE_peak_at_chr19:36370032..36370046,+ | |||
|id=chr19:36370032..36370046,+ | |||
|ontology_enrichment_celltype=CL:0000047!7.86e-10!8;CL:0002319!3.17e-07!25;CL:0000540!5.89e-07!6;CL:0000031!5.89e-07!6;CL:0000404!5.89e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.43e-13;82!UBERON:0006222;7.25e-08;1!UBERON:0005425;2.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.72e-64!86;UBERON:0000073!9.28e-61!94;UBERON:0001016!9.28e-61!94;UBERON:0001017!3.93e-59!82;UBERON:0001049!6.58e-57!57;UBERON:0005068!6.58e-57!57;UBERON:0006241!6.58e-57!57;UBERON:0007135!6.58e-57!57;UBERON:0002346!2.02e-47!90;UBERON:0002780!8.03e-47!41;UBERON:0001890!8.03e-47!41;UBERON:0006240!8.03e-47!41;UBERON:0002616!9.98e-47!59;UBERON:0003075!1.01e-46!86;UBERON:0007284!1.01e-46!86;UBERON:0000955!9.27e-46!69;UBERON:0006238!9.27e-46!69;UBERON:0003080!1.96e-45!42;UBERON:0001893!4.96e-42!34;UBERON:0002020!1.39e-41!34;UBERON:0003528!1.39e-41!34;UBERON:0002791!2.15e-40!33;UBERON:0003056!5.06e-39!61;UBERON:0001869!1.47e-38!32;UBERON:0000924!1.06e-32!173;UBERON:0006601!1.06e-32!173;UBERON:0004121!1.12e-31!169;UBERON:0000033!1.10e-29!123;UBERON:0000956!7.79e-28!25;UBERON:0000203!7.79e-28!25;UBERON:0000153!1.67e-27!129;UBERON:0007811!1.67e-27!129;UBERON:0002619!5.10e-27!22;UBERON:0001950!5.26e-24!20;UBERON:0007023!1.04e-23!115;UBERON:0002420!1.17e-15!9;UBERON:0007245!1.17e-15!9;UBERON:0010009!1.17e-15!9;UBERON:0010011!1.17e-15!9;UBERON:0000454!1.17e-15!9;UBERON:0002308!2.22e-15!9;UBERON:0000125!2.22e-15!9;UBERON:0000025!9.89e-13!194;UBERON:0009663!1.60e-12!7;UBERON:0003076!2.35e-12!15;UBERON:0003057!2.35e-12!15;UBERON:0002298!8.59e-11!8;UBERON:0000064!8.93e-11!219;UBERON:0000200!2.46e-10!6;UBERON:0001871!3.20e-10!7;UBERON:0000475!3.36e-10!365;UBERON:0004732!8.40e-10!13;UBERON:0000483!1.15e-09!309;UBERON:0000349!1.82e-09!5;UBERON:0000119!2.11e-09!312;UBERON:0004111!2.71e-09!241;UBERON:0004733!1.99e-08!12;UBERON:0002028!1.99e-08!12;UBERON:0007277!1.99e-08!12;UBERON:0000966!4.33e-08!5;UBERON:0005388!4.33e-08!5;UBERON:0001802!4.33e-08!5;UBERON:0000369!1.02e-07!4;UBERON:0002435!1.02e-07!4;UBERON:0000204!1.02e-07!4;UBERON:0010082!1.02e-07!4;UBERON:0000477!7.08e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.50e-40;34!UBERON:0003528;6.16e-35;34!UBERON:0002020;6.16e-35;34!UBERON:0002791;7.20e-34;32!UBERON:0001869;1.24e-33;32!UBERON:0002780;3.05e-33;41!UBERON:0001890;3.05e-33;41!UBERON:0000073;1.25e-31;53!UBERON:0002616;1.25e-31;53!UBERON:0002619;5.37e-30;22!UBERON:0001950;2.61e-27;20!UBERON:0000956;2.65e-26;25!UBERON:0000203;2.65e-26;25!UBERON:0000955;9.75e-23;68!UBERON:0001017;1.04e-20;75!UBERON:0001016;7.38e-17;83!UBERON:0002420;9.29e-17;9!UBERON:0000125;9.29e-17;9!UBERON:0007245;9.29e-17;9!UBERON:0002308;9.29e-17;9!UBERON:0010009;9.29e-17;9!UBERON:0010011;9.29e-17;9!UBERON:0000454;9.29e-17;9!UBERON:0002298;3.02e-16;6!UBERON:0009663;3.55e-14;7!UBERON:0005162;1.60e-13;2!UBERON:0000122;1.60e-13;2!UBERON:0007023;5.50e-13;114!UBERON:0001872;1.22e-11;5!UBERON:0000349;2.10e-11;5!UBERON:0004732;2.13e-11;13!UBERON:0000200;5.60e-10;6!UBERON:0011216;5.54e-09;132!UBERON:0000988;5.72e-09;3!UBERON:0001896;5.72e-09;3!UBERON:0005290;5.72e-09;3!UBERON:0001871;1.29e-08;6!UBERON:0004733;3.39e-08;12!UBERON:0002028;3.39e-08;12!UBERON:0002336;7.25e-08;1!UBERON:0011215;7.25e-08;1!UBERON:0001018;7.25e-08;1!UBERON:0002473;7.25e-08;1!UBERON:0005340;7.25e-08;1!UBERON:0003544;7.25e-08;1!UBERON:0005970;7.25e-08;1!UBERON:0002316;7.25e-08;1!UBERON:0001020;7.25e-08;1!UBERON:0002437;7.25e-08;1!UBERON:0002581;9.38e-08;1!UBERON:0002038;9.38e-08;1!UBERON:0009661;9.38e-08;1!UBERON:0002950;9.38e-08;1!UBERON:0001891;9.38e-08;1!UBERON:0002902;2.42e-07;1!UBERON:0001882;2.42e-07;1!UBERON:0002022;2.42e-07;1!UBERON:0001874;2.42e-07;1!UBERON:0003112;2.42e-07;1!UBERON:0000941;2.42e-07;1!UBERON:0001785;2.42e-07;1!UBERON:0002464;2.42e-07;1!UBERON:0004904;2.42e-07;1!UBERON:0011158;2.42e-07;1!UBERON:0001021;2.42e-07;1!UBERON:0009899;2.42e-07;1!UBERON:0007190;2.42e-07;1!UBERON:0003128;2.42e-07;1!UBERON:0005403;2.42e-07;1!UBERON:0001703;2.42e-07;1!UBERON:0002241;2.42e-07;1!UBERON:0000369;6.25e-07;4!UBERON:0002435;6.25e-07;4!UBERON:0000204;6.25e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.10e-57,56;UBERON:0005068,4.10e-57,56;UBERON:0006241,4.10e-57,56;UBERON:0007135,4.10e-57,56;UBERON:0000073,2.58e-55,53;UBERON:0002616,2.58e-55,53;UBERON:0001017,1.01e-52,81;UBERON:0001016,9.84e-51,89;UBERON:0000955,5.71e-50,68;UBERON:0006238,5.71e-50,68;UBERON:0002780,1.17e-48,41;UBERON:0001890,1.17e-48,41;UBERON:0003080,1.17e-48,41;UBERON:0006240,1.17e-48,41;UBERON:0001893,7.71e-47,34;UBERON:0003528,3.00e-41,34;UBERON:0002020,3.00e-41,34;UBERON:0003075,3.55e-41,82;UBERON:0007284,3.55e-41,82;UBERON:0002346,4.67e-39,86;UBERON:0002791,2.14e-38,32;UBERON:0001869,3.14e-38,32;UBERON:0007023,5.91e-37,114;UBERON:0003056,2.67e-35,61;UBERON:0010371,1.62e-31,104;UBERON:0002619,3.39e-30,22;UBERON:0001950,1.45e-27,20;UBERON:0000956,1.77e-26,25;UBERON:0000203,1.77e-26,25;UBERON:0010314,5.25e-26,132;UBERON:0004121,2.62e-24,171;UBERON:0000924,2.62e-24,171;UBERON:0006601,2.62e-24,171;UBERON:0011216,1.72e-20,223;UBERON:0002420,1.02e-16,9;UBERON:0007245,1.02e-16,9;UBERON:0010009,1.02e-16,9;UBERON:0010011,1.02e-16,9;UBERON:0000454,1.02e-16,9;UBERON:0000125,1.05e-16,9;UBERON:0002308,1.05e-16,9;UBERON:0002298,1.31e-16,6;UBERON:0009663,5.77e-14,7;UBERON:0005162,1.61e-13,2;UBERON:0000122,1.61e-13,2;UBERON:0000025,1.83e-13,192;UBERON:0001872,8.99e-12,5;UBERON:0004732,1.35e-11,13;UBERON:0000349,1.61e-11,5;UBERON:0003076,4.17e-10,15;UBERON:0003057,4.17e-10,15;UBERON:0000200,5.21e-10,6;UBERON:0004111,8.23e-10,240;UBERON:0001896,3.52e-09,3;UBERON:0005290,3.52e-09,3;UBERON:0010096,3.52e-09,3;UBERON:0000988,3.98e-09,3;UBERON:0001871,8.62e-09,6;UBERON:0004733,2.27e-08,12;UBERON:0002028,2.27e-08,12;UBERON:0007277,2.27e-08,12;UBERON:0002336,7.03e-08,1;UBERON:0011215,7.03e-08,1;UBERON:0001018,7.03e-08,1;UBERON:0002473,7.03e-08,1;UBERON:0005340,7.03e-08,1;UBERON:0003544,7.03e-08,1;UBERON:0005970,7.03e-08,1;UBERON:0002316,7.03e-08,1;UBERON:0001020,7.03e-08,1;UBERON:0002437,7.03e-08,1;UBERON:0002038,9.10e-08,1;UBERON:0009661,9.10e-08,1;UBERON:0002950,9.10e-08,1;UBERON:0001891,9.10e-08,1;UBERON:0009616,9.10e-08,1;UBERON:0010286,9.10e-08,1;UBERON:0002581,9.71e-08,1;UBERON:0002902,1.42e-07,1;UBERON:0009899,1.42e-07,1;UBERON:0000483,1.77e-07,306;UBERON:0007190,2.21e-07,1;UBERON:0000119,2.34e-07,309;UBERON:0001882,2.35e-07,1;UBERON:0005403,2.35e-07,1;UBERON:0000941,2.50e-07,1;UBERON:0001785,2.50e-07,1;UBERON:0002464,2.50e-07,1;UBERON:0004904,2.50e-07,1;UBERON:0001021,2.50e-07,1;UBERON:0003902,2.50e-07,1;UBERON:0005425,2.50e-07,1;UBERON:0003112,3.84e-07,1;UBERON:0011158,3.84e-07,1;UBERON:0003128,3.84e-07,1;UBERON:0001703,3.84e-07,1;UBERON:0002241,3.84e-07,1;UBERON:0004761,3.84e-07,1;UBERON:0009617,3.84e-07,1;UBERON:0001874,4.09e-07,1;UBERON:0002022,4.34e-07,1;UBERON:0000369,7.95e-07,4;UBERON:0002435,7.95e-07,4;UBERON:0000204,7.95e-07,4;UBERON:0010082,7.95e-07,4 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,1.34013012267479,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,8.72399471485697,2.31920245404628,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.60298219312704,0,0.442317039724898,0.591095237907095,0.438770794307945,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,4.65067817566672,0,4.45102446878144,0,0,0,0,0,0.91821828489147,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,1.2029051231617,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0.288950589901519,1.20084057741958,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0.160753148465019,0,0.415440338029185,0,0,1.09349201984444,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.98348902614035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.68457782784319,0.250381861413,0.573409195690071,1.66393577305278,1.80079568530012,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,1.47727217721857,0,0.478901577171454,1.64093091392604,0.504143392443436,1.86724581653388,1.13032951942296,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48582686160468,1.56215619722769,0.620060389503552,1.77564268542939,0,0,0,0.175871244359621,0,0,0.336283722218824,0.606965604236632,0,0,0,0.171488009437418,1.42736439251347,2.43359262182542,0,0,0,1.09980912941201,0,0,0,0,0.285906176706625,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.237840181555137,0,0.219881033490858,0,0,0,0.470317296361523,0,0,1.96308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,2.43677291357467,0.315543124386369,2.85564258801842,2.18175345170189,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.75836092965222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:36370032..36370046,+ | |||
}} |
Revision as of 22:53, 20 January 2014
Short description: | p@chr19:36370032..36370046, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36370032..36370046, + |
Coexpression cluster: | C1050_brain_diencephalon_substantia_corpus_occipital_optic_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data