FFCP PHASE1:Hg19::chr19:35521594..35521614,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6324 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |||
|TSSclassifier=strong | |||
|UniProt=Q07699 | |||
|association_with_transcript=2bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | |||
|coexpression_cluster_id=C3776 | |||
|description=CAGE_peak_6_at_SCN1B_5end | |||
|id=chr19:35521594..35521614,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000669;9.78e-07;4 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.72e-10;3!UBERON:0006601;1.32e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.19e-25!115;UBERON:0001049!8.19e-21!57;UBERON:0005068!8.19e-21!57;UBERON:0006241!8.19e-21!57;UBERON:0007135!8.19e-21!57;UBERON:0003075!1.61e-18!86;UBERON:0007284!1.61e-18!86;UBERON:0002616!1.80e-18!59;UBERON:0000955!1.50e-17!69;UBERON:0006238!1.50e-17!69;UBERON:0005743!2.44e-17!86;UBERON:0002346!1.10e-16!90;UBERON:0001017!6.96e-16!82;UBERON:0002780!1.50e-15!41;UBERON:0001890!1.50e-15!41;UBERON:0006240!1.50e-15!41;UBERON:0003080!7.36e-15!42;UBERON:0000073!2.75e-14!94;UBERON:0001016!2.75e-14!94;UBERON:0004111!7.86e-14!241;UBERON:0001893!1.10e-13!34;UBERON:0000477!1.29e-13!286;UBERON:0000025!3.85e-13!194;UBERON:0002020!4.25e-13!34;UBERON:0003528!4.25e-13!34;UBERON:0002791!6.62e-13!33;UBERON:0000483!1.63e-12!309;UBERON:0001869!1.86e-12!32;UBERON:0000119!2.70e-12!312;UBERON:0000033!3.77e-12!123;UBERON:0003056!6.49e-12!61;UBERON:0000153!1.19e-11!129;UBERON:0007811!1.19e-11!129;UBERON:0001950!1.67e-10!20;UBERON:0002619!5.85e-09!22;UBERON:0000956!1.28e-08!25;UBERON:0000203!1.28e-08!25;UBERON:0000468!3.75e-08!659;UBERON:0004121!6.00e-08!169;UBERON:0000467!6.67e-08!625;UBERON:0000480!8.63e-08!626;UBERON:0000062!1.57e-07!511;UBERON:0000924!2.81e-07!173;UBERON:0006601!2.81e-07!173;UBERON:0000475!2.96e-07!365;UBERON:0003076!3.02e-07!15;UBERON:0003057!3.02e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.59e-24;20!UBERON:0001893;2.22e-22;34!UBERON:0002619;4.50e-22;22!UBERON:0000073;1.15e-20;53!UBERON:0002616;1.15e-20;53!UBERON:0001869;5.04e-20;32!UBERON:0002791;2.93e-19;32!UBERON:0000956;4.19e-19;25!UBERON:0000203;4.19e-19;25!UBERON:0002780;4.80e-19;41!UBERON:0001890;4.80e-19;41!UBERON:0003528;1.15e-18;34!UBERON:0002020;1.15e-18;34!UBERON:0000955;3.57e-13;68!UBERON:0000200;4.60e-12;6!UBERON:0004733;2.28e-11;12!UBERON:0002028;2.28e-11;12!UBERON:0001017;3.31e-11;75!UBERON:0004732;2.10e-10;13!UBERON:0001872;3.75e-10;5!UBERON:0002021;4.84e-10;5!UBERON:0001016;2.53e-09;83!UBERON:0007023;2.78e-09;114!UBERON:0001870;3.59e-09;3!UBERON:0002680;2.55e-08;9!UBERON:0001895;2.55e-08;9!UBERON:0002298;4.00e-08;6!UBERON:0007100;2.38e-07;25!UBERON:0005090;3.73e-07;2!UBERON:0001630;3.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.23e-38,53;UBERON:0002616,2.23e-38,53;UBERON:0001049,6.43e-36,56;UBERON:0005068,6.43e-36,56;UBERON:0006241,6.43e-36,56;UBERON:0007135,6.43e-36,56;UBERON:0000955,5.71e-30,68;UBERON:0006238,5.71e-30,68;UBERON:0002780,4.45e-28,41;UBERON:0001890,4.45e-28,41;UBERON:0003080,4.45e-28,41;UBERON:0006240,4.45e-28,41;UBERON:0003075,1.67e-27,82;UBERON:0007284,1.67e-27,82;UBERON:0007023,4.99e-27,114;UBERON:0010314,7.87e-26,132;UBERON:0002346,7.91e-26,86;UBERON:0001017,1.09e-25,81;UBERON:0001893,4.31e-25,34;UBERON:0001950,1.81e-24,20;UBERON:0003528,1.83e-22,34;UBERON:0002020,1.83e-22,34;UBERON:0001016,2.46e-22,89;UBERON:0002619,5.07e-22,22;UBERON:0001869,1.11e-21,32;UBERON:0010371,2.31e-21,104;UBERON:0002791,2.77e-21,32;UBERON:0000025,6.72e-21,192;UBERON:0000956,4.64e-19,25;UBERON:0000203,4.64e-19,25;UBERON:0003056,4.69e-17,61;UBERON:0004111,2.86e-16,240;UBERON:0000483,3.75e-14,306;UBERON:0000119,6.87e-14,309;UBERON:0000200,2.87e-12,6;UBERON:0004121,4.23e-12,171;UBERON:0000924,4.23e-12,171;UBERON:0006601,4.23e-12,171;UBERON:0004733,1.81e-11,12;UBERON:0002028,1.81e-11,12;UBERON:0007277,1.81e-11,12;UBERON:0004732,1.70e-10,13;UBERON:0001872,4.19e-10,5;UBERON:0002021,6.34e-10,5;UBERON:0001870,2.92e-09,3;UBERON:0003076,6.10e-09,15;UBERON:0003057,6.10e-09,15;UBERON:0002680,1.82e-08,9;UBERON:0001895,1.82e-08,9;UBERON:0010092,1.82e-08,9;UBERON:0007100,2.91e-08,27;UBERON:0002298,4.10e-08,6;UBERON:0011216,2.75e-07,223;UBERON:0005090,3.64e-07,2;UBERON:0001630,3.64e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,1.20538905604795,0,0,0.246242116153576,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,1.80302897343931,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.580418477257168,0.56738522469114,0,0,0,0,0,0.736555271975129,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.895037932904712,1.0843174571537,0,0.289693037921647,0,0.486634870302636,0,0,0,0.523916301990851,0,0,0,0,0.132957960518865,0,0,0,0.993812036833525,1.72046919021225,1.38856200643038,0,0.838998872419812,0.275118041940067,0.835979866147242,0.258416759169329,0,0.33472061276467,1.20848795132744,0.760272105718513,0.976248230192678,0,0,0.267899184852239,0,0.112611480483322,0,1.89853131913626,0.366403487860815,0,0,0,0,0.25326102332916,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0.24666754841716,1.55605517699883,0.134710672069688,0,0,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0,0.408308342509787,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0,1.20036438433761,0.618315175430633,0.257640540045629,0.558350568994769,0,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0.403008392910561,0,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,1.28648187638577,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0.577465791044295,0.462985512576611,0.380508304469197,3.1608175918371,0.858486162094873,0.738651018262192,0,0.445893486866185,0,0,0,0,0.290633938513962,0,0,0,0.621984346622316,0.864719720501769,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,3.91871190177462,0,1.09970290300263,0,1.50677127429638,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0.601892199455438,0,0,0,0.184369168541703,0.260650843404249,2.15381273209015,1.02943027143257,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0.917870904715969,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0,0,0.270946437543853,1.50506932156456,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0,0,0.137836572484531,0.107420244868274,0,0,0.267096106940212,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0.762520775695299,0.767693373934002,0,0,0,0.359744915166629,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0,0,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,1.55832187032068,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,2.69027484669369,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,9.15490417902499,1.87984741883082,10.9352619012813,0.658156191461918,0,0,0.538651809526579,2.62066728448103,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,1.01101699471016,3.21031058919516,4.45102446878144,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.387956065953678,0,0.90392296312213,0.137041924646751,0,2.02594547058812,0,0,0,0.999048047910651,0,0,0,0,0,0,0.543616824294456,0.627617077873999,0,0,3.60252173225874,0.547621515567972,0,0.429765441419957,0,1.95497680890578,1.14580212005842,0,0.998395002494955,2.57535628881943,1.11585728720936,0.0671834724867263,0.720599767084807,0,0,0,0.0674035438541849,1.08270229666224,0,0,0,0,0,0,0,0.77380195455795,2.00473536971481,0,0.157611414598396,0,0,0,0,2.85878130549347,0.662091970365432,0,0,0.864221491201268,0.979762080328227,0,0,0.340776043570843,0.226624183040251,0.293104467356165,0,2.84422503995411,0.13223260174269,0.171086837884329,0,0.427149650270779,0,0,0,0,0,0,0,0,0.306345576763462,0,0,1.77213635993397,1.58634144372552,2.253436752717,1.14681839138014,0.665574309221114,3.41530216177609,0,0.124980407962107,0,0,0,0,0,0,0,0,0.378806010550178,0.754703705257725,0,0,0.151230923763239,0,1.4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| |||
|short_description=p6@SCN1B | |||
}} |
Revision as of 22:42, 20 January 2014
Short description: | p6@SCN1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCN1B_5end |
Coexpression cluster: | C3776_skeletal_occipital_cerebellum_pons_left_postcentral_paracentral |
Association with transcript: | 2bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | Q07699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data