FFCP PHASE1:Hg19::chr19:16045510..16045553,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57834 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13265 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBI6 | |||
|association_with_transcript=122bp_to_ENST00000402119,NM_021187,uc002nbt.2_5end | |||
|coexpression_cluster_id=C3760 | |||
|description=CAGE_peak_8_at_CYP4F11_5end | |||
|id=chr19:16045510..16045553,- | |||
|ontology_enrichment_celltype=CL:0000159!3.19e-07!2;CL:0000066!4.64e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.17e-17;2!CL:0000082;5.16e-08;19!CL:0002149;8.25e-07;6!CL:0002255;8.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.07e-17,2;CL:0000082,5.16e-08,19;CL:0002149,8.48e-07,6;CL:0002255,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.01e-10;30 | |||
|ontology_enrichment_disease=DOID:305!3.28e-13!106;DOID:0050687!6.34e-09!143;DOID:1749!3.53e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1324;6.78e-10;15!DOID:0050615;2.45e-09;16!DOID:3001;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.24e-11,106;DOID:1324,6.78e-10,15;DOID:0050615,2.45e-09,16;DOID:0050687,1.02e-08,143;DOID:3001,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.03e-15!57;UBERON:0005068!1.03e-15!57;UBERON:0006241!1.03e-15!57;UBERON:0007135!1.03e-15!57;UBERON:0002616!5.18e-15!59;UBERON:0002780!7.06e-15!41;UBERON:0001890!7.06e-15!41;UBERON:0006240!7.06e-15!41;UBERON:0000955!7.85e-15!69;UBERON:0006238!7.85e-15!69;UBERON:0002294!1.82e-14!7;UBERON:0001173!1.82e-14!7;UBERON:0004912!1.82e-14!7;UBERON:0003080!1.96e-14!42;UBERON:0001893!3.50e-14!34;UBERON:0001869!3.61e-13!32;UBERON:0002791!8.85e-13!33;UBERON:0007023!1.19e-12!115;UBERON:0004111!1.77e-12!241;UBERON:0002619!2.84e-12!22;UBERON:0009497!5.31e-12!25;UBERON:0000015!5.31e-12!25;UBERON:0002423!5.31e-12!25;UBERON:0006235!5.31e-12!25;UBERON:0004161!5.31e-12!25;UBERON:0001017!1.22e-11!82;UBERON:0002394!1.45e-11!4;UBERON:0003928!1.45e-11!4;UBERON:0000025!2.37e-11!194;UBERON:0005743!7.42e-11!86;UBERON:0000956!1.37e-10!25;UBERON:0000203!1.37e-10!25;UBERON:0002020!1.60e-10!34;UBERON:0003528!1.60e-10!34;UBERON:0000033!2.46e-10!123;UBERON:0003075!6.82e-10!86;UBERON:0007284!6.82e-10!86;UBERON:0000153!1.49e-09!129;UBERON:0007811!1.49e-09!129;UBERON:0000477!1.76e-09!286;UBERON:0000349!1.84e-09!5;UBERON:0000073!2.46e-09!94;UBERON:0001016!2.46e-09!94;UBERON:0002346!3.15e-09!90;UBERON:0008835!3.50e-09!22;UBERON:0003894!3.50e-09!22;UBERON:0000475!4.40e-09!365;UBERON:0001896!4.50e-09!3;UBERON:0005290!4.50e-09!3;UBERON:0010096!4.50e-09!3;UBERON:0001950!6.32e-09!20;UBERON:0003056!9.05e-09!61;UBERON:0009854!1.05e-08!23;UBERON:0003929!2.84e-08!54;UBERON:0000483!5.21e-08!309;UBERON:0005911!6.27e-08!82;UBERON:0007499!7.15e-08!25;UBERON:0000119!7.82e-08!312;UBERON:0009856!1.67e-07!26;UBERON:0004121!4.52e-07!169;UBERON:0000481!4.53e-07!347;UBERON:0001954!6.70e-07!2;UBERON:0003022!6.70e-07!2;UBERON:0002421!6.70e-07!2;UBERON:0002600!6.70e-07!2;UBERON:0001897!9.23e-07!2;UBERON:0000924!9.24e-07!173;UBERON:0006601!9.24e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;9.49e-20;7!UBERON:0001173;9.49e-20;7!UBERON:0002110;3.06e-12;3!UBERON:0002394;1.38e-09;4!UBERON:0003928;1.38e-09;4!UBERON:0003343;1.63e-09;4!UBERON:0004785;1.63e-09;4!UBERON:0004802;5.16e-08;19!UBERON:0000115;5.16e-08;19!UBERON:0002048;4.79e-07;22!UBERON:0004807;4.79e-07;22!UBERON:0000117;4.79e-07;22!UBERON:0000171;4.79e-07;22!UBERON:0000170;4.79e-07;22!UBERON:0000974;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.22e-15,9;UBERON:0001173,1.22e-15,9;UBERON:0004912,1.22e-15,9;UBERON:0002110,2.89e-12,3;UBERON:0006242,2.89e-12,3;UBERON:0003343,1.70e-09,4;UBERON:0004785,1.70e-09,4;UBERON:0004802,5.16e-08,19;UBERON:0000115,5.16e-08,19;UBERON:0002048,4.79e-07,22;UBERON:0000117,4.79e-07,22;UBERON:0000171,4.79e-07,22;UBERON:0000170,4.79e-07,22;UBERON:0005597,4.79e-07,22;UBERON:0000118,4.79e-07,22;UBERON:0005911,5.19e-07,82;UBERON:0002394,8.02e-07,6;UBERON:0003928,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,4.83357171624145,0,0,0,0,0,0.278304294485554,0,0,0,0,0.796554137998498,0,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26914319044689,0,0,0.293977192243133,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0.189932387867636,0,1.76349404553374,0.213452994739353,0,0,0,0,0,0,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0.590564889088493,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,7.01456035325751,6.34333520085005,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0.453411851024545,0,0,0,0,0,0,0,0,0.76872455576384,0.345430341731199,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.41023272848151,0,0.0691572524642179,0,0,0.0981477185010256,1.53360640352062,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0.118193840883968,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0.335566295393377,0,0.975343399858155,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@CYP4F11 | |||
}} |
Revision as of 21:55, 20 January 2014
Short description: | p8@CYP4F11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CYP4F11_5end |
Coexpression cluster: | C3760_lung_bile_large_papillotubular_keratoacanthoma_oral_endometrial |
Association with transcript: | 122bp_to_ENST00000402119, NM_021187, uc002nbt.2_5end |
EntrezGene: | CYP4F11 |
HGNC: | 13265 |
UniProt: | Q9HBI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.07e-17 | 2 |
epithelial cell of lung | 5.16e-08 | 19 |
epithelial cell of uterus | 8.48e-07 | 6 |
stromal cell of endometrium | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
biliary system | 1.22e-15 | 9 |
biliary tree | 1.22e-15 | 9 |
biliary bud | 1.22e-15 | 9 |
gallbladder | 2.89e-12 | 3 |
gall bladder primordium | 2.89e-12 | 3 |
mucosa of oral region | 1.70e-09 | 4 |
respiratory system mucosa | 1.70e-09 | 4 |
respiratory tract epithelium | 5.16e-08 | 19 |
lung epithelium | 5.16e-08 | 19 |
lung | 4.79e-07 | 22 |
respiratory tube | 4.79e-07 | 22 |
respiration organ | 4.79e-07 | 22 |
pair of lungs | 4.79e-07 | 22 |
lung primordium | 4.79e-07 | 22 |
lung bud | 4.79e-07 | 22 |
endo-epithelium | 5.19e-07 | 82 |
bile duct | 8.02e-07 | 6 |
digestive system duct | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.24e-11 | 106 |
lung cancer | 6.78e-10 | 15 |
respiratory system cancer | 2.45e-09 | 16 |
cell type cancer | 1.02e-08 | 143 |
female reproductive endometrioid cancer | 8.48e-07 | 6 |