FFCP PHASE1:Hg19::chr19:14074098..14074127,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-112bp_to_BC085614_5end | |||
|description=CAGE_peak_1_at_BC085614_5end | |||
|id=chr19:14074098..14074127,- | |||
|ontology_enrichment_celltype=CL:0000393!1.20e-10!60;CL:0000211!1.20e-10!60;CL:0000047!1.41e-10!8;CL:0000055!7.07e-10!180;CL:0002319!1.31e-09!25;CL:0000540!6.14e-08!6;CL:0000031!6.14e-08!6;CL:0000404!6.14e-08!6;CL:0000183!6.32e-08!59;CL:0000128!1.92e-07!7;CL:0000126!1.92e-07!7;CL:0000127!1.92e-07!7;CL:0002453!1.92e-07!7;CL:0000187!6.54e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002319;9.62e-16;25!CL:0000128;1.21e-14;7!CL:0000126;1.21e-14;7!CL:0000127;1.21e-14;7!CL:0002603;2.02e-10;3!CL:0000064;2.19e-09;3!CL:0000067;2.19e-09;3!CL:0005012;2.19e-09;3!CL:0002304;2.19e-09;3!CL:0002605;1.51e-08;3!CL:0000540;4.15e-08;6!CL:0000404;4.15e-08;6!CL:0000243;1.34e-07;15!CL:0000125;1.34e-07;15!CL:0000047;2.04e-07;2!CL:0002602;6.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.83e-16,25;CL:0000128,6.59e-15,7;CL:0000126,6.59e-15,7;CL:0000127,6.59e-15,7;CL:0002453,6.59e-15,7;CL:0000047,1.80e-13,8;CL:0002603,2.09e-10,3;CL:0000064,1.52e-09,3;CL:0000067,1.52e-09,3;CL:0005012,1.52e-09,3;CL:0002304,1.52e-09,3;CL:0002605,7.35e-09,3;CL:0000133,1.17e-08,59;CL:0000540,2.72e-08,6;CL:0000031,2.72e-08,6;CL:0000404,2.72e-08,6;CL:0000243,1.02e-07,15;CL:0000125,1.02e-07,15;CL:0000030,1.02e-07,15;CL:0000339,1.02e-07,15;CL:0002602,4.35e-07,2;CL:0000095,8.71e-07,17;CL:0000123,8.71e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000031;4.15e-08;6!CL:0000339;1.34e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.80e-10!347;UBERON:0000922!8.67e-09!612;UBERON:0000468!4.44e-08!659;UBERON:0002385!8.15e-08!63;UBERON:0001015!8.15e-08!63;UBERON:0000383!8.15e-08!63;UBERON:0002203!1.55e-07!6;UBERON:0001768!1.55e-07!6;UBERON:0007023!2.13e-07!115;UBERON:0004121!6.39e-07!169;UBERON:0001134!7.34e-07!61;UBERON:0002036!7.34e-07!61;UBERON:0003082!7.34e-07!61;UBERON:0005743!8.08e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.78e-09;5!UBERON:0002216;1.78e-09;5!UBERON:0011134;1.78e-09;5!UBERON:0002209;1.78e-09;5!UBERON:0002213;1.78e-09;5!UBERON:0007844;1.78e-09;5!UBERON:0011138;1.78e-09;5!UBERON:0001130;1.78e-09;5!UBERON:0001066;1.78e-09;5!UBERON:0001468;1.78e-09;5!UBERON:0001778;2.19e-09;3!UBERON:0001775;2.19e-09;3!UBERON:0004905;1.09e-08;8!UBERON:0000982;1.09e-08;8!UBERON:0004770;1.09e-08;8!UBERON:0002037;1.98e-08;6!UBERON:0000488;3.98e-07;4!UBERON:0006444;6.34e-07;2!UBERON:0001995;6.34e-07;2!UBERON:0004715;6.34e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.52e-09,3;UBERON:0001775,1.52e-09,3;UBERON:0011135,1.60e-09,5;UBERON:0002216,1.60e-09,5;UBERON:0011134,1.60e-09,5;UBERON:0002209,1.60e-09,5;UBERON:0002213,1.60e-09,5;UBERON:0005856,1.60e-09,5;UBERON:0005866,1.60e-09,5;UBERON:0005863,1.60e-09,5;UBERON:0007844,1.60e-09,5;UBERON:0011138,1.60e-09,5;UBERON:0001130,1.60e-09,5;UBERON:0001066,1.60e-09,5;UBERON:0001468,1.60e-09,5;UBERON:0004905,1.16e-08,8;UBERON:0000982,1.16e-08,8;UBERON:0004770,1.16e-08,8;UBERON:0002037,1.93e-08,6;UBERON:0006215,1.93e-08,6;UBERON:0000488,3.04e-07,4;UBERON:0006444,4.35e-07,2;UBERON:0001995,4.35e-07,2;UBERON:0004715,4.35e-07,2;UBERON:0001017,5.93e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,2.59909341216098,2.98257638155124,0,0,1.46062018077475,0,7.87974771691443,10.4040352534569,5.95563970808367,1.71741592278634,1.77936752594749,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0.50133791063589,1.15877215168659,0,0.973269740605272,3.49778823507051,2.4390233720882,1.75669571386252,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,1.68203280042692,0,0,0.311211035399766,0,0,1.05950199351452,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,1.10550885580591,1.96318984233954,0,0.247266929278557,0,2.15585442544872,0.336672227908132,0.500474079487857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0.243947412259191,0.397589304964456,0.813357600086629,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,2.55046890945169,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,10.7296933755565,0,0.797814349754612,0,0,0,0,0.285955987316295,1.62786481617433,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9260688415659,3.90419561572865,3.86644406388848,3.51784157202132,2.55175500661265,0,0,0,1.47229790062968,2.00068208423871,0.271265023699736,0,0,0,0,0,0,0,1.32845119707087,0,0,0.979005787313703,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.34444334449382,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.96670718292122,0.154048617114644,0.15350367472613,0.137836572484531,1.28904293841928,1.88521702088497,0.255679882248303,0.356128142586949,0,0,0,0,0.464845549297286,0,0,0,0,0,0.37064843820784,0,0,0,0.38126038784765,0.255897791311334,1.71175595213568,0.318203247925937,0,0.539617372749944,0.54907405947211,0.589062011728432,0,0,0,0.48763373908959,0,0,0.272999822815972,0.848432591722276,0,0,0,0,0,3.27947376023316,0,0,0.281695602532241,1.14729081763241,0.392996164052485,0,0,1.26664581178598,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,2.46608514092334,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.331737779793674,0,0,0,0,4.69396576873162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0.611030144933625,0,0,0,0.269604531922708,0.802577647298789,0,0,0,0,0.789168805698781,6.04953580243319,0.61214552326098,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.678923115418936,0,2.25980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,6.93481415763645,0,0.136905378891993,0,0,0,1.39641200636127,0.229160424011684,0,0,0,0,1.20930250476107,0,0,0,0,0,0,0,0,0,0.321506296930038,1.78801267576404,0.415440338029185,0,0,0,0,0,0.209818352539992,0,0,0,2.1440859791201,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0.640724475406168,1.41483874589699,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.343395705182793,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,1.00828678488687,0,0,1.42769420259154,0,0,0,0,0,0,0,1.88025820873143,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13972371402056,0,0,1.82631744101899,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,3.4794432940146,0,0,0,0,0,0,0,0.231522474323834,3.27839340755936,0,1.47088993052343,0,0,0,2.113278637917,0.169927114687817,0,0,0,0,0,0,2.92134555298607,0.458729283404541,0,0,0.0679914901909147,0.872701380680755,1.5870805215462,2.60396512716726,3.23522940041993,0,0,0,0,0,0.534434810531121,0,0.250707539292375,1.59135266258303,0.535928260312357,0,0,0.213233981900981,2.14257988317366,0,0.186224142887574,0,0.0636471582781649,0,0,1.71116650542641,0.134704106029175,0.0717222053926763,1.66330178273007,0,0,0,0,0,2.44482888365733,2.84827324821017,1.33151354837103,0.201273793591026,0 | |||
|short_description=p1@BC085614 | |||
}} |
Revision as of 21:44, 20 January 2014
Short description: | p1@BC085614 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC085614_5end |
Coexpression cluster: | NA |
Association with transcript: | -112bp_to_BC085614_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.83e-16 | 25 |
oligodendrocyte | 6.59e-15 | 7 |
macroglial cell | 6.59e-15 | 7 |
astrocyte | 6.59e-15 | 7 |
oligodendrocyte precursor cell | 6.59e-15 | 7 |
neuronal stem cell | 1.80e-13 | 8 |
astrocyte of the cerebellum | 2.09e-10 | 3 |
ciliated cell | 1.52e-09 | 3 |
ciliated epithelial cell | 1.52e-09 | 3 |
multi-ciliated epithelial cell | 1.52e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.52e-09 | 3 |
astrocyte of the cerebral cortex | 7.35e-09 | 3 |
neurectodermal cell | 1.17e-08 | 59 |
neuron | 2.72e-08 | 6 |
neuroblast | 2.72e-08 | 6 |
electrically signaling cell | 2.72e-08 | 6 |
glial cell (sensu Vertebrata) | 1.02e-07 | 15 |
glial cell | 1.02e-07 | 15 |
glioblast | 1.02e-07 | 15 |
glioblast (sensu Vertebrata) | 1.02e-07 | 15 |
annulus pulposus cell | 4.35e-07 | 2 |
neuron associated cell | 8.71e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.71e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.52e-09 | 3 |
ciliary body | 1.52e-09 | 3 |
intervertebral cartilage | 1.60e-09 | 5 |
symphysis | 1.60e-09 | 5 |
nonsynovial joint | 1.60e-09 | 5 |
fibrous joint | 1.60e-09 | 5 |
cartilaginous joint | 1.60e-09 | 5 |
developing mesenchymal condensation | 1.60e-09 | 5 |
pre-cartilage condensation | 1.60e-09 | 5 |
cartilaginous condensation | 1.60e-09 | 5 |
cartilage element | 1.60e-09 | 5 |
post-cranial axial skeletal system | 1.60e-09 | 5 |
vertebral column | 1.60e-09 | 5 |
intervertebral disk | 1.60e-09 | 5 |
intervertebral joint | 1.60e-09 | 5 |
articulation | 1.16e-08 | 8 |
skeletal joint | 1.16e-08 | 8 |
articular system | 1.16e-08 | 8 |
cerebellum | 1.93e-08 | 6 |
rhombic lip | 1.93e-08 | 6 |
atypical epithelium | 3.04e-07 | 4 |
annulus fibrosus | 4.35e-07 | 2 |
fibrocartilage | 4.35e-07 | 2 |
annulus fibrosus disci intervertebralis | 4.35e-07 | 2 |
central nervous system | 5.93e-07 | 81 |