FFCP PHASE1:Hg19::chr18:51750888..51750920,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6917 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBB5 | |||
|association_with_transcript=67bp_to_BC032638_5end | |||
|description=CAGE_peak_3_at_MBD2_5end | |||
|id=chr18:51750888..51750920,- | |||
|ontology_enrichment_celltype=CL:0000548!1.24e-14!679;CL:0000004!1.24e-14!679;CL:0000255!1.24e-14!679;CL:0000012!3.06e-14!682;CL:0000063!1.92e-13!578;CL:0002371!1.17e-11!591;CL:0000144!1.30e-11!625;CL:0000860!6.47e-09!45;CL:0000003!1.35e-08!722;CL:0002057!1.64e-08!42;CL:0002078!2.12e-08!44;CL:0000766!5.07e-08!76;CL:0000071!1.29e-07!18;CL:0002546!1.29e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.36e-09;33!CL:0002057;5.36e-09;33!CL:0000071;9.15e-08;18!CL:0000473;9.54e-07;39!CL:0000234;9.54e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,9.00e-09,45;CL:0000860,1.63e-08,42;CL:0002057,1.63e-08,42;CL:0000071,1.29e-07,18;CL:0002546,1.29e-07,18;CL:0000766,1.77e-07,72;CL:0000473,2.43e-07,48;CL:0000234,2.43e-07,48;CL:0000115,4.91e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;9.15e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.32e-11!448;UBERON:0004120!3.32e-11!448;UBERON:0006603!3.32e-11!448;UBERON:0003081!2.12e-08!216;UBERON:0001986!1.29e-07!18;UBERON:0004638!1.29e-07!18;UBERON:0004852!1.29e-07!18;UBERON:0004765!5.71e-07!101;UBERON:0001434!5.71e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.15e-08;18!UBERON:0001986;9.15e-08;18!UBERON:0004852;9.15e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.67e-09,315;UBERON:0004120,2.67e-09,315;UBERON:0006603,2.67e-09,315;UBERON:0004638,1.29e-07,18;UBERON:0001986,1.29e-07,18;UBERON:0004852,1.29e-07,18;UBERON:0003081,1.73e-07,203;UBERON:0001434,3.40e-07,100 | |||
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| |||
|short_description=p3@MBD2 | |||
}} |
Revision as of 19:24, 20 January 2014
Short description: | p3@MBD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MBD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 67bp_to_BC032638_5end |
EntrezGene: | MBD2 |
HGNC: | 6917 |
UniProt: | Q9UBB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 9.00e-09 | 45 |
classical monocyte | 1.63e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-08 | 42 |
blood vessel endothelial cell | 1.29e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.29e-07 | 18 |
myeloid leukocyte | 1.77e-07 | 72 |
defensive cell | 2.43e-07 | 48 |
phagocyte | 2.43e-07 | 48 |
endothelial cell | 4.91e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.67e-09 | 315 |
mesoderm-derived structure | 2.67e-09 | 315 |
presumptive mesoderm | 2.67e-09 | 315 |
blood vessel endothelium | 1.29e-07 | 18 |
endothelium | 1.29e-07 | 18 |
cardiovascular system endothelium | 1.29e-07 | 18 |
lateral plate mesoderm | 1.73e-07 | 203 |
skeletal system | 3.40e-07 | 100 |