FFCP PHASE1:Hg19::chr18:3466261..3466312,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr18:3466261..3466312,+ | |||
|id=chr18:3466261..3466312,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.01e-24!180;CL:0000222!2.32e-20!119;CL:0000187!3.54e-15!54;CL:0000393!9.12e-15!60;CL:0000211!9.12e-15!60;CL:0000680!9.83e-15!57;CL:0000056!9.83e-15!57;CL:0000355!9.83e-15!57;CL:0000183!1.81e-14!59;CL:0000192!1.13e-13!42;CL:0000514!1.13e-13!42;CL:0002321!2.31e-13!248;CL:0000220!3.81e-13!246;CL:0000359!1.78e-11!32;CL:0000115!9.48e-11!35;CL:0002371!2.44e-09!591;CL:0002078!3.52e-09!44;CL:0002139!8.95e-09!24;CL:0000213!2.74e-08!57;CL:0000215!2.74e-08!57;CL:0000144!5.00e-08!625;CL:0000071!1.25e-07!18;CL:0002546!1.25e-07!18;CL:0000057!3.79e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.07e-13;36!CL:0000359;3.98e-11;32!CL:0000192;2.96e-09;43!CL:0002139;3.66e-09;24!CL:0000235;3.94e-09;6!CL:0000071;1.48e-08;18!CL:0002539;5.69e-08;10!CL:0002078;8.73e-08;45!CL:0000213;8.30e-07;58!CL:0000215;8.30e-07;58!CL:1000413;9.51e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.83e-17,121;CL:0000115,5.67e-14,36;CL:0000192,1.18e-12,43;CL:0000514,1.18e-12,43;CL:0002078,2.21e-12,45;CL:0000359,2.50e-11,32;CL:0002321,7.52e-11,250;CL:0000187,2.64e-10,55;CL:0000213,3.95e-10,58;CL:0000215,3.95e-10,58;CL:0000393,6.54e-10,61;CL:0000211,6.54e-10,61;CL:0000680,2.60e-09,58;CL:0000056,2.60e-09,58;CL:0000355,2.60e-09,58;CL:0002139,3.86e-09,24;CL:0000235,4.00e-09,6;CL:0000048,5.57e-09,427;CL:0000071,1.54e-08,18;CL:0002546,1.54e-08,18;CL:0000723,1.95e-08,433;CL:0002539,4.16e-08,10;CL:0000034,4.87e-08,441;CL:1000413,9.78e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;2.96e-09;43!CL:0002546;1.48e-08;18 | |||
|ontology_enrichment_disease=DOID:2394!4.97e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.43e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.08e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.58e-18!84;UBERON:0002049!5.32e-18!79;UBERON:0007798!5.32e-18!79;UBERON:0001981!5.65e-18!60;UBERON:0007500!5.65e-18!60;UBERON:0004537!5.65e-18!60;UBERON:0006965!5.65e-18!60;UBERON:0000055!2.29e-17!69;UBERON:0000914!9.28e-17!83;UBERON:0002329!9.28e-17!83;UBERON:0003077!9.28e-17!83;UBERON:0003059!9.28e-17!83;UBERON:0007282!9.28e-17!83;UBERON:0009618!9.28e-17!83;UBERON:0007285!9.28e-17!83;UBERON:0004290!1.75e-16!70;UBERON:0001637!5.36e-16!42;UBERON:0003509!5.36e-16!42;UBERON:0004572!5.36e-16!42;UBERON:0000486!1.99e-15!82;UBERON:0003914!5.11e-15!118;UBERON:0004535!1.53e-14!110;UBERON:0001009!7.92e-14!113;UBERON:0002385!2.89e-13!63;UBERON:0001015!2.89e-13!63;UBERON:0000383!2.89e-13!63;UBERON:0001134!6.03e-13!61;UBERON:0002036!6.03e-13!61;UBERON:0003082!6.03e-13!61;UBERON:0004573!9.67e-13!33;UBERON:0004571!9.67e-13!33;UBERON:0005256!1.52e-11!143;UBERON:0000947!3.61e-11!21;UBERON:0010191!3.61e-11!21;UBERON:0000490!4.24e-11!138;UBERON:0000119!2.53e-08!312;UBERON:0000926!2.62e-08!448;UBERON:0004120!2.62e-08!448;UBERON:0006603!2.62e-08!448;UBERON:0000483!4.06e-08!309;UBERON:0002100!4.30e-08!216;UBERON:0001986!1.25e-07!18;UBERON:0004638!1.25e-07!18;UBERON:0004852!1.25e-07!18;UBERON:0001135!1.28e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;5.17e-14;21!UBERON:0010191;5.17e-14;21!UBERON:0004573;1.28e-13;33!UBERON:0004571;1.28e-13;33!UBERON:0001637;1.05e-12;42!UBERON:0003509;1.05e-12;42!UBERON:0004572;1.05e-12;42!UBERON:0007500;1.68e-10;56!UBERON:0001981;1.68e-10;56!UBERON:0004537;1.68e-10;56!UBERON:0004638;1.48e-08;18!UBERON:0001986;1.48e-08;18!UBERON:0004852;1.48e-08;18!UBERON:0004237;5.69e-08;10!UBERON:0004695;5.69e-08;10!UBERON:0002111;5.69e-08;10!UBERON:0004178;5.69e-08;10!UBERON:0000055;6.97e-08;65!UBERON:0002049;1.09e-07;75!UBERON:0007798;1.09e-07;75!UBERON:0003914;2.41e-07;74!UBERON:0006914;6.91e-07;25!UBERON:0003915;9.51e-07;9!UBERON:0004700;9.51e-07;9!UBERON:0001917;9.51e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.11e-17,78;UBERON:0007798,5.11e-17,78;UBERON:0007500,5.94e-17,59;UBERON:0001981,5.94e-17,59;UBERON:0004537,5.94e-17,59;UBERON:0006965,5.94e-17,59;UBERON:0001637,7.53e-17,42;UBERON:0003509,7.53e-17,42;UBERON:0004572,7.53e-17,42;UBERON:0004872,7.60e-17,83;UBERON:0000055,1.92e-16,68;UBERON:0004573,1.12e-14,33;UBERON:0004571,1.12e-14,33;UBERON:0004535,1.71e-14,109;UBERON:0000947,2.94e-14,21;UBERON:0010191,2.94e-14,21;UBERON:0001009,1.14e-13,112;UBERON:0000926,1.33e-13,315;UBERON:0004120,1.33e-13,315;UBERON:0006603,1.33e-13,315;UBERON:0003914,1.57e-13,117;UBERON:0007503,6.03e-11,78;UBERON:0002329,1.67e-10,71;UBERON:0003059,1.67e-10,71;UBERON:0007282,1.67e-10,71;UBERON:0004290,1.67e-10,71;UBERON:0009618,1.67e-10,71;UBERON:0003077,3.28e-10,72;UBERON:0007285,3.28e-10,72;UBERON:0007524,6.29e-10,73;UBERON:0000490,2.11e-09,148;UBERON:0000486,3.17e-09,83;UBERON:0004638,1.54e-08,18;UBERON:0001986,1.54e-08,18;UBERON:0004852,1.54e-08,18;UBERON:0001134,3.70e-08,62;UBERON:0002036,3.70e-08,62;UBERON:0003082,3.70e-08,62;UBERON:0004237,4.16e-08,10;UBERON:0004695,4.16e-08,10;UBERON:0002111,4.16e-08,10;UBERON:0004178,4.16e-08,10;UBERON:0002385,1.21e-07,64;UBERON:0001015,1.21e-07,64;UBERON:0000383,1.21e-07,64;UBERON:0003081,2.02e-07,203;UBERON:0006914,8.23e-07,25;UBERON:0001135,9.31e-07,15;UBERON:0003915,9.78e-07,9;UBERON:0004700,9.78e-07,9;UBERON:0001917,9.78e-07,9 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0,0,1.23766352960047,0.331397375727916,6.72325146451775,4.82155622419182,6.57279081348636,1.95173119516203,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3915474239924,14.5752149708541,18.0302897343931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0.722878304769133,0,0.724232594804119,8.74814541756209,1.94653948121054,0.0945348171640679,0.221729397462564,0.087834785693126,0.589405839739707,0.364295288292542,0,3.8945687238562,3.48259474598534,15.5560813807072,0,0,0,5.16782259153433,1.72046919021225,3.12426451446835,2.82653970962005,4.19499436209906,0.550236083880135,3.13492449805216,5.94358546089456,7.47109151642091,4.01664735317604,0.805658634218294,0,0.24406205754817,2.57364156242108,4.0507097394088,4.46498641420399,2.91888184414021,2.0270066486998,3.06633274931766,1.89853131913626,3.11442964681692,0,0,0,0,1.64619665163954,4.76673050927588,1.43418310374407,2.4826786753885,0.560677600142307,1.06748995729705,1.48000529050296,0.933633106199299,1.48181739276657,1.47115712802113,0,0,0,14.3593635341947,4.56377457235559,5.82849854152024,0.587172493218824,0.971237666208789,2.10676210053373,1.63323337003915,2.94802361548243,1.54988671763648,1.18800285728205,0.494533858557114,0,0,1.85169725349473,1.00094815897571,0.831192346452549,0.438977620880838,0,0,0.453728732640084,0,0.640672166455702,0.423863802319124,0,1.13357782162283,0,0.37223371266318,0.675105328965065,0,0,0.368199594569197,0.323292113637624,0,0.10075209822764,0,1.15956511897978,0,0.573609190778008,0.609868530647977,0.132529768321485,0.116193942869518,1.0366105501537,0.504641701751257,0,1.56449532329816,0.643240938192885,4.14404764057442,2.3218396401599,10.1063127433742,0,0,0,0,0,0,0,0.196221465125346,0,4.42893272774789,1.40241773803446,0,0,0,0,0.590789906681404,0,0,1.88724591328378,0.109750285408626,0,0,0.185176890317059,0.325808305310325,2.07986957055916,1.44331342025273,0.231860809950154,0.117408694235822,0.577465791044295,0,0.380508304469197,0,0,59.5845154731502,44.2268061113159,53.8044807485196,0.93733833986777,0.335964256397719,0.708875486211932,0,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0,3.93686944611448,3.4378958300245,3.51652341630141,3.4214489204541,3.08482478109971,8.70994867747361,4.57322292208925,1.00917975910825,0,1.54010400223995,6.72212921940444,0,1.690605505112,0.531876233169741,0,0.514414748524284,0,0,0.142977993658148,0,0,0.325736184293735,0,0,3.01439377059586,4.35766729300147,0.699810938274399,96.0827867065405,66.2979360690407,73.7918788190611,0.239624855491583,0,2.85273810081437,0.723906533337896,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,1.89885516589815,0,0.178428988797162,0,0.117141414992713,4.51419149591578,18.1926003244788,14.4862299809507,1.32845119707087,0.553107505625109,6.0818530127658,0.195801157462741,0.343143423810856,0,0,0,0,0,0.604780586659361,1.24053903909388,0.153461973288062,0.841980283299221,1.40953064181271,0,0.804269605718038,1.48418066444991,3.54682295746108,6.21466038595945,7.1450625732014,11.4235974420397,4.88083589531829,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.131124414959424,1.35359883872224,0.539107359730903,0,1.46139224653261,0.316654886678627,4.54933536283586,3.74206151608334,2.59099099322567,0,0,0,0,0.831076008928724,0,0,0,3.59030175162945,0,0,1.13345112812495,0,0,0,0,0,0.870036464629098,0.462145851343933,0.307007349452259,0.275673144969061,1.39646318328756,0.870100163485371,1.10794615640931,0.356128142586949,0.165284915360978,0,0,0,9.761756535243,0.62962469366128,6.2733354314454,1.54016790088044,2.12922412126809,3.47973196830029,1.29726953372744,0.429374660225974,2.60510858551767,2.21465597303108,2.66882271493355,2.303080121802,0.42793898803392,1.90921948755562,0.78494864019923,1.61885211824983,1.64722217841633,0.942499218765491,1.41527737101321,3.17020642346017,5.05510147486777,0,2.19342140668156,0,0.136499911407986,0.141405431953713,5.65040583101214,0,0.66343897524122,2.19225442626881,6.36653087693356,5.24715801637306,2.63783490051515,2.16876448669825,1.40847801266121,0.717056761020258,0.0982490410131212,0.7133421029625,4.96665489698837,1.05553817648832,2.30506425071931,1.13841952129715,0,0.865999014529609,0,0,1.03558180854457,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,2.19762268907841,0,0,0,0,0,0,0,0,11.5761053223822,0,0.211125408127993,0.398495976502139,0,0,0,0,0.622079175323615,0,0,0.511572370226872,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,3.64614578710404,0,0,0,0,0.641183153813036,1.0660695520372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| |||
|short_description=p@chr18:3466261..3466312,+ | |||
}} |
Revision as of 18:22, 20 January 2014
Short description: | p@chr18:3466261..3466312, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:3466261..3466312, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.83e-17 | 121 |
endothelial cell | 5.67e-14 | 36 |
smooth muscle cell | 1.18e-12 | 43 |
smooth muscle myoblast | 1.18e-12 | 43 |
meso-epithelial cell | 2.21e-12 | 45 |
vascular associated smooth muscle cell | 2.50e-11 | 32 |
embryonic cell | 7.52e-11 | 250 |
muscle cell | 2.64e-10 | 55 |
lining cell | 3.95e-10 | 58 |
barrier cell | 3.95e-10 | 58 |
electrically responsive cell | 6.54e-10 | 61 |
electrically active cell | 6.54e-10 | 61 |
muscle precursor cell | 2.60e-09 | 58 |
myoblast | 2.60e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.60e-09 | 58 |
endothelial cell of vascular tree | 3.86e-09 | 24 |
macrophage | 4.00e-09 | 6 |
multi fate stem cell | 5.57e-09 | 427 |
blood vessel endothelial cell | 1.54e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.54e-08 | 18 |
somatic stem cell | 1.95e-08 | 433 |
aortic smooth muscle cell | 4.16e-08 | 10 |
stem cell | 4.87e-08 | 441 |
endothelial cell of artery | 9.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.08e-10 | 14 |