FFCP PHASE1:Hg19::chr17:7608489..7608500,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1949 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3228 | |||
|TSSclassifier=strong | |||
|UniProt=Q15768 | |||
|association_with_transcript=-19bp_to_ENST00000226091,NM_001406,uc002gis.2_5end | |||
|coexpression_cluster_id=C3689 | |||
|description=CAGE_peak_3_at_EFNB3_5end | |||
|id=chr17:7608489..7608500,+ | |||
|ontology_enrichment_celltype=CL:0000133!8.66e-11!59;CL:0000221!6.49e-10!71;CL:0002319!2.68e-08!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.38e-08;82!UBERON:0006238;3.12e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.08e-27!82;UBERON:0005743!8.78e-26!86;UBERON:0000073!2.62e-25!94;UBERON:0001016!2.62e-25!94;UBERON:0000955!1.49e-23!69;UBERON:0006238!1.49e-23!69;UBERON:0000924!1.78e-23!173;UBERON:0006601!1.78e-23!173;UBERON:0004121!4.90e-22!169;UBERON:0001869!5.12e-22!32;UBERON:0002780!1.72e-21!41;UBERON:0001890!1.72e-21!41;UBERON:0006240!1.72e-21!41;UBERON:0001893!2.99e-21!34;UBERON:0001049!3.93e-21!57;UBERON:0005068!3.93e-21!57;UBERON:0006241!3.93e-21!57;UBERON:0007135!3.93e-21!57;UBERON:0002020!1.37e-20!34;UBERON:0003528!1.37e-20!34;UBERON:0003080!1.50e-20!42;UBERON:0002791!1.74e-20!33;UBERON:0002346!2.50e-20!90;UBERON:0002616!2.61e-20!59;UBERON:0000033!4.85e-19!123;UBERON:0003075!7.73e-19!86;UBERON:0007284!7.73e-19!86;UBERON:0003056!5.15e-18!61;UBERON:0000153!8.91e-18!129;UBERON:0007811!8.91e-18!129;UBERON:0000956!3.09e-17!25;UBERON:0000203!3.09e-17!25;UBERON:0002619!4.93e-16!22;UBERON:0001950!1.41e-14!20;UBERON:0000475!2.64e-12!365;UBERON:0000119!5.78e-11!312;UBERON:0000483!1.00e-10!309;UBERON:0000025!3.51e-09!194;UBERON:0000481!2.39e-08!347;UBERON:0004111!8.06e-08!241;UBERON:0000477!5.48e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.35e-37;32!UBERON:0002619;7.50e-35;22!UBERON:0002791;6.08e-34;32!UBERON:0001893;2.00e-33;34!UBERON:0003528;2.78e-33;34!UBERON:0002020;2.78e-33;34!UBERON:0001950;4.50e-31;20!UBERON:0000956;3.59e-30;25!UBERON:0000203;3.59e-30;25!UBERON:0002780;2.75e-24;41!UBERON:0001890;2.75e-24;41!UBERON:0000955;1.74e-17;68!UBERON:0000073;6.53e-17;53!UBERON:0002616;6.53e-17;53!UBERON:0001017;1.24e-15;75!UBERON:0001016;4.55e-13;83!UBERON:0001871;6.28e-13;6!UBERON:0002420;6.39e-13;9!UBERON:0007245;6.39e-13;9!UBERON:0010009;6.39e-13;9!UBERON:0010011;6.39e-13;9!UBERON:0000454;6.39e-13;9!UBERON:0001872;2.03e-12;5!UBERON:0000349;3.11e-12;5!UBERON:0000369;9.80e-11;4!UBERON:0002435;9.80e-11;4!UBERON:0000204;9.80e-11;4!UBERON:0000200;1.04e-10;6!UBERON:0009663;7.16e-09;7!UBERON:0005383;2.60e-08;3!UBERON:0005382;2.60e-08;3!UBERON:0000125;8.59e-07;9!UBERON:0002308;8.59e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.68e-41,32;UBERON:0001893,1.10e-38,34;UBERON:0002791,5.65e-38,32;UBERON:0001017,6.54e-37,81;UBERON:0001016,8.40e-36,89;UBERON:0003528,2.22e-35,34;UBERON:0002020,2.22e-35,34;UBERON:0002619,3.83e-35,22;UBERON:0002780,1.11e-33,41;UBERON:0001890,1.11e-33,41;UBERON:0003080,1.11e-33,41;UBERON:0006240,1.11e-33,41;UBERON:0000955,8.36e-32,68;UBERON:0006238,8.36e-32,68;UBERON:0001950,5.19e-31,20;UBERON:0000956,2.00e-30,25;UBERON:0000203,2.00e-30,25;UBERON:0001049,5.05e-29,56;UBERON:0005068,5.05e-29,56;UBERON:0006241,5.05e-29,56;UBERON:0007135,5.05e-29,56;UBERON:0000073,8.97e-29,53;UBERON:0002616,8.97e-29,53;UBERON:0003056,7.46e-24,61;UBERON:0003075,4.09e-20,82;UBERON:0007284,4.09e-20,82;UBERON:0002346,8.79e-19,86;UBERON:0004121,4.12e-18,171;UBERON:0000924,4.12e-18,171;UBERON:0006601,4.12e-18,171;UBERON:0011216,4.42e-17,223;UBERON:0010371,2.42e-16,104;UBERON:0002420,3.76e-13,9;UBERON:0007245,3.76e-13,9;UBERON:0010009,3.76e-13,9;UBERON:0010011,3.76e-13,9;UBERON:0000454,3.76e-13,9;UBERON:0001871,5.20e-13,6;UBERON:0010314,5.95e-13,132;UBERON:0000349,8.17e-13,5;UBERON:0001872,2.84e-12,5;UBERON:0000369,5.75e-11,4;UBERON:0002435,5.75e-11,4;UBERON:0000204,5.75e-11,4;UBERON:0010082,5.75e-11,4;UBERON:0000200,1.40e-10,6;UBERON:0009663,6.02e-09,7;UBERON:0007023,1.10e-08,114;UBERON:0005383,1.37e-08,3;UBERON:0005382,1.37e-08,3;UBERON:0000025,1.57e-07,192;UBERON:0000125,7.53e-07,9;UBERON:0002308,7.53e-07,9 | |||
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| |||
|short_description=p3@EFNB3 | |||
}} |
Revision as of 13:38, 20 January 2014
Short description: | p3@EFNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EFNB3_5end |
Coexpression cluster: | C3689_brain_amygdala_temporal_duodenum_insula_putamen_Mesenchymal |
Association with transcript: | -19bp_to_ENST00000226091, NM_001406, uc002gis.2_5end |
EntrezGene: | EFNB3 |
HGNC: | 3228 |
UniProt: | Q15768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data