FFCP PHASE1:Hg19::chr17:75446796..75446809,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UHD8 | |||
|association_with_transcript=183bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_23_at_SEPT9_5end | |||
|id=chr17:75446796..75446809,+ | |||
|ontology_enrichment_celltype=CL:0000133!2.13e-08!59;CL:0000055!6.58e-08!180;CL:0000333!8.82e-08!41 | |||
|ontology_enrichment_celltype_v019=CL:0000669;9.43e-10;4!CL:0000188;4.20e-09;9!CL:0000708;1.22e-07;3!CL:0000128;1.41e-07;7!CL:0000126;1.41e-07;7!CL:0000127;1.41e-07;7!CL:0002548;2.74e-07;6!CL:0002605;2.89e-07;3!CL:0002319;3.73e-07;25!CL:0002564;9.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.02e-10,59;CL:0000669,9.66e-10,4;CL:0000188,5.40e-09,9;CL:0000333,9.71e-09,41;CL:0000221,8.43e-08,72;CL:0000708,1.20e-07,3;CL:0000128,1.69e-07,7;CL:0000126,1.69e-07,7;CL:0000127,1.69e-07,7;CL:0002453,1.69e-07,7;CL:0002548,2.22e-07,6;CL:0002605,3.13e-07,3;CL:0002319,3.99e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000133;3.52e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!8.24e-11!312;UBERON:0003075!3.90e-10!86;UBERON:0007284!3.90e-10!86;UBERON:0000073!7.60e-10!94;UBERON:0001016!7.60e-10!94;UBERON:0000483!8.97e-10!309;UBERON:0001017!9.47e-10!82;UBERON:0000481!1.08e-09!347;UBERON:0005743!3.37e-09!86;UBERON:0002346!8.40e-09!90;UBERON:0002616!1.13e-08!59;UBERON:0000955!1.73e-08!69;UBERON:0006238!1.73e-08!69;UBERON:0004121!2.04e-08!169;UBERON:0005256!2.48e-08!143;UBERON:0001893!4.26e-08!34;UBERON:0001869!4.72e-08!32;UBERON:0000475!7.52e-08!365;UBERON:0001049!8.22e-08!57;UBERON:0005068!8.22e-08!57;UBERON:0006241!8.22e-08!57;UBERON:0007135!8.22e-08!57;UBERON:0000153!9.73e-08!129;UBERON:0007811!9.73e-08!129;UBERON:0002020!9.87e-08!34;UBERON:0003528!9.87e-08!34;UBERON:0000033!1.13e-07!123;UBERON:0002791!1.27e-07!33;UBERON:0000924!1.33e-07!173;UBERON:0006601!1.33e-07!173;UBERON:0003056!2.76e-07!61;UBERON:0000956!4.46e-07!25;UBERON:0000203!4.46e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;3.53e-10;11!UBERON:0011135;5.51e-10;5!UBERON:0002216;5.51e-10;5!UBERON:0011134;5.51e-10;5!UBERON:0002209;5.51e-10;5!UBERON:0002213;5.51e-10;5!UBERON:0007844;5.51e-10;5!UBERON:0011138;5.51e-10;5!UBERON:0001130;5.51e-10;5!UBERON:0001066;5.51e-10;5!UBERON:0001468;5.51e-10;5!UBERON:0003210;1.22e-07;3!UBERON:0005284;4.21e-07;5!UBERON:0002242;9.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.79e-10,11;UBERON:0011135,4.66e-10,5;UBERON:0002216,4.66e-10,5;UBERON:0011134,4.66e-10,5;UBERON:0002209,4.66e-10,5;UBERON:0002213,4.66e-10,5;UBERON:0005856,4.66e-10,5;UBERON:0005866,4.66e-10,5;UBERON:0005863,4.66e-10,5;UBERON:0007844,4.66e-10,5;UBERON:0011138,4.66e-10,5;UBERON:0001130,4.66e-10,5;UBERON:0001066,4.66e-10,5;UBERON:0001468,4.66e-10,5;UBERON:0003210,1.20e-07,3;UBERON:0001016,1.66e-07,89;UBERON:0000119,1.87e-07,309;UBERON:0005284,2.29e-07,5;UBERON:0001017,2.95e-07,81;UBERON:0003104,3.50e-07,160;UBERON:0009142,3.50e-07,160;UBERON:0004121,7.26e-07,171;UBERON:0000924,7.26e-07,171;UBERON:0006601,7.26e-07,171;UBERON:0010314,8.13e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.737201809504527,0.697801167972428,1.09220686065086,0.791300934685361,2.72285976512103,1.98838425436749,0,0,0,0.487932798790507,2.46242116153576,0.816002764977012,0.313454721478088,3.43483184557268,2.46373965131192,3.01302335027527,0.382067028739756,0.328402357799783,0.393553906568396,0.393364276848904,0,0.619264493264304,0,0.6024118375565,0,0.0774672005803016,0.426507697462265,0,0.553995408531877,0,0.217010870715852,0,0,0,0.290796477559129,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0,0.56738522469114,0,0,0.521482918420201,0.434377689410233,0,0.368277635987565,0,0.845021145247767,0.425208599930087,0.628975936525128,0.112328631146495,0.600707571366025,0.16072558669708,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,0.722878304769133,1.00267582127178,0,0,0,1.89069634328136,0.886917589850256,1.05401742831751,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0.371457501329565,0,0,0,0.56530794192401,0.419499436209906,0,0,0,1.42306505074684,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,1.68203280042692,1.06748995729705,1.48000529050296,1.8672662123986,0.134710672069688,1.14423332179421,13.9248833433337,10.94734256512,0.937285727335186,1.87296046098192,0.570471821544449,0.896692083310806,0.23486899728753,0.485618833104395,0.561803226808994,0.204154171254893,0.368502951935304,0.413303124703062,0,0,2.73048408581408,0,0.168336113954066,0.750711119231785,0.277064115484183,0,0,0,0.794025282120147,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0,0,1.93975268182574,0.355009592516614,0,0.169560592310488,0,0,0,0.365921118388786,0.265059536642971,1.16193942869518,0.725627385107593,0,0,1.56449532329816,0.643240938192885,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,4.115740113314,7.3504355692771,0,0,0,0,0.122988438543114,0.514703430895577,0.109750285408626,0,0,0.462942225792648,0.651616610620649,1.03993478527958,0,1.62302566965108,1.52631302506568,0.577465791044295,0,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.414656231081544,0.288239906833923,0,0.698476837213859,1.52795370223311,1.17217447210047,0,1.54241239054985,1.20137223137567,0.857479297891735,9.30688000066494,6.10344096366592,4.62031200671985,0,0,0.845302752556,0,0,0.771622122786426,0,1.0656887160644,0.857867961948885,4.34097284313154,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.224170287987055,0,0.215627574859517,0,16.0079613260152,11.712586847186,1.54657762555539,2.01019518401218,0,0,0,0,2.33113834266366,3.00102312635806,1.08506009479894,0.207970861530807,0.535286966391485,0.157702415033935,0.35142424497814,0.601892199455438,0,0,0.664225598535437,0.553107505625109,1.04260337361699,128.053956980632,36.0300595001399,0,0,0,0.303127571446259,0,2.41912234663744,0,0,0,0,0,0,0,0.462629081407967,0.355123450626254,0.492762936082855,0,0.813472649219715,0.120859449591622,0.40101294060657,0,0.68888668898764,0.728364672026868,0.786746489756545,1.35359883872224,0.385076685522074,5.49044838423799,0,0.73886140225013,0,0,1.0795795805107,3.08454505380579,5.1479823133332,4.51520796469368,0.764628819135115,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0,0,0.618246069886334,0,0,0,0,0,2.32009723901093,1.07834031980251,1.22802939780904,1.51620229732984,1.07420244868274,1.88521702088497,0.852266274161009,1.4245125703478,0.165284915360978,0,0,0,0.464845549297286,0,0,0.616067160352178,0,0,0,0,2.97726695487734,1.89827654831236,0,0.767693373934002,0.855877976067841,1.27281299170375,0.78494864019923,0.539617372749944,0.274537029736055,0.117812402345686,0.606547444719948,0,0,0.48763373908959,0,0,0.545999645631943,0.282810863907425,1.13008116620243,0,0,0,0,1.31178950409327,0.202910376962704,0.30982349809975,0.563391205064483,0.717056761020258,0.392996164052485,0.35667105148125,0,0.633322905892992,0.329294892959902,1.51789269506286,1.39973888097993,0.0962221127255121,1.34060455107157,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0,0.211673582723883,0,0,1.36940807419915,0,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.439524537815682,0,0,0.284136146806413,0,0.593929361665277,0,0,1.26602474769461,0,0,0,0,0,0,2.14764233254525,0,0,0,0.179021174675609,0,0.591860433821602,0,0,0.969332746095218,1.48428957058962,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.60298219312704,0,1.43753037910592,1.18219047581419,0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| |||
|short_description=p23@SEPT9 | |||
}} |
Revision as of 17:35, 20 January 2014
Short description: | p23@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SEPT9_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 183bp_to_ENST00000431235, NM_001113496, uc002jty.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.02e-10 | 59 |
pericyte cell | 9.66e-10 | 4 |
cell of skeletal muscle | 5.40e-09 | 9 |
migratory neural crest cell | 9.71e-09 | 41 |
ectodermal cell | 8.43e-08 | 72 |
leptomeningeal cell | 1.20e-07 | 3 |
oligodendrocyte | 1.69e-07 | 7 |
macroglial cell | 1.69e-07 | 7 |
astrocyte | 1.69e-07 | 7 |
oligodendrocyte precursor cell | 1.69e-07 | 7 |
cardiac fibroblast | 2.22e-07 | 6 |
astrocyte of the cerebral cortex | 3.13e-07 | 3 |
neural cell | 3.99e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 1.79e-10 | 11 |
intervertebral cartilage | 4.66e-10 | 5 |
symphysis | 4.66e-10 | 5 |
nonsynovial joint | 4.66e-10 | 5 |
fibrous joint | 4.66e-10 | 5 |
cartilaginous joint | 4.66e-10 | 5 |
developing mesenchymal condensation | 4.66e-10 | 5 |
pre-cartilage condensation | 4.66e-10 | 5 |
cartilaginous condensation | 4.66e-10 | 5 |
cartilage element | 4.66e-10 | 5 |
post-cranial axial skeletal system | 4.66e-10 | 5 |
vertebral column | 4.66e-10 | 5 |
intervertebral disk | 4.66e-10 | 5 |
intervertebral joint | 4.66e-10 | 5 |
blood-cerebrospinal fluid barrier | 1.20e-07 | 3 |
nervous system | 1.66e-07 | 89 |
cell layer | 1.87e-07 | 309 |
brain vasculature | 2.29e-07 | 5 |
central nervous system | 2.95e-07 | 81 |
mesenchyme | 3.50e-07 | 160 |
entire embryonic mesenchyme | 3.50e-07 | 160 |
ectoderm-derived structure | 7.26e-07 | 171 |
ectoderm | 7.26e-07 | 171 |
presumptive ectoderm | 7.26e-07 | 171 |
structure with developmental contribution from neural crest | 8.13e-07 | 132 |