FFCP PHASE1:Hg19::chr17:70560894..70560899,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:70560894..70560899,- | |||
|id=chr17:70560894..70560899,- | |||
|ontology_enrichment_celltype=CL:0000066!1.67e-09!254;CL:0000223!7.73e-09!59;CL:0002076!7.16e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000159;1.01e-11;2!CL:1001319;4.17e-07;1!CL:1000600;4.17e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,3.75e-12,2;CL:1001319,4.97e-07,1;CL:1000600,4.97e-07,1;CL:0000313,6.24e-07,1;CL:0000319,6.99e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.86e-24!106;DOID:0050687!3.26e-23!143;DOID:1749!1.76e-13!14;DOID:162!3.16e-11!235;DOID:14566!1.74e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:3908;1.78e-10;5!DOID:3905;6.64e-10;9!DOID:0050615;2.57e-08;16!DOID:4556;4.22e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.15e-13,143;DOID:305,9.57e-13,106;DOID:3908,2.39e-10,5;DOID:3905,1.01e-09,9;DOID:162,3.98e-09,235;DOID:14566,7.91e-09,239;DOID:0050615,3.12e-08,16;DOID:4556,5.85e-08,3;DOID:2152,6.24e-07,1;DOID:3030,6.99e-07,1;DOID:3151,7.39e-07,1;DOID:3149,7.39e-07,1;DOID:0050619,7.82e-07,1;DOID:1357,7.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.22e-13!57;UBERON:0005068!1.22e-13!57;UBERON:0006241!1.22e-13!57;UBERON:0007135!1.22e-13!57;UBERON:0000955!3.54e-12!69;UBERON:0006238!3.54e-12!69;UBERON:0001017!1.86e-11!82;UBERON:0002020!2.88e-11!34;UBERON:0003528!2.88e-11!34;UBERON:0004119!3.99e-11!169;UBERON:0000925!3.99e-11!169;UBERON:0006595!3.99e-11!169;UBERON:0005743!5.28e-11!86;UBERON:0001893!8.01e-11!34;UBERON:0002780!1.63e-10!41;UBERON:0001890!1.63e-10!41;UBERON:0006240!1.63e-10!41;UBERON:0002791!1.89e-10!33;UBERON:0000153!3.08e-10!129;UBERON:0007811!3.08e-10!129;UBERON:0000073!4.05e-10!94;UBERON:0001016!4.05e-10!94;UBERON:0001007!4.16e-10!155;UBERON:0001555!4.16e-10!155;UBERON:0007026!4.16e-10!155;UBERON:0003080!4.49e-10!42;UBERON:0002616!5.54e-10!59;UBERON:0000033!7.47e-10!123;UBERON:0001869!8.41e-10!32;UBERON:0007023!4.46e-09!115;UBERON:0004921!8.80e-09!129;UBERON:0004185!8.80e-09!129;UBERON:0000160!1.86e-08!27;UBERON:0003075!2.31e-08!86;UBERON:0007284!2.31e-08!86;UBERON:0004121!8.26e-08!169;UBERON:0002294!1.16e-07!7;UBERON:0001173!1.16e-07!7;UBERON:0004912!1.16e-07!7;UBERON:0002346!1.67e-07!90;UBERON:0000062!2.11e-07!511;UBERON:0000924!2.92e-07!173;UBERON:0006601!2.92e-07!173;UBERON:0005409!3.18e-07!35;UBERON:0003056!4.16e-07!61;UBERON:0002308!8.55e-07!9;UBERON:0000125!8.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;3.03e-07;1!UBERON:0003703;3.03e-07;1!UBERON:0001174;3.03e-07;1!UBERON:0004914;3.03e-07;1!UBERON:0004645;4.17e-07;1!UBERON:0001256;4.17e-07;1!UBERON:0001259;4.17e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.13e-07,1;UBERON:0003703,3.13e-07,1;UBERON:0001174,3.13e-07,1;UBERON:0004914,3.13e-07,1;UBERON:0004645,4.97e-07,1;UBERON:0001256,4.97e-07,1;UBERON:0001259,4.97e-07,1;UBERON:0004911,6.24e-07,1;UBERON:0001764,7.82e-07,1;UBERON:0001825,7.82e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0.753255837568817,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06976078313403,0,0,0,0,0,0,0,0,0.486634870302636,0.378139268656271,0.665188192387692,0.43917392846563,0.261958150995425,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.40101294060657,0.276242966807689,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0.852408440419239,0,0,0,0,0.562677665642051,0.111308705022906,0,0.63337622438398,0.398495976502139,0.552567831062295,2.77126022639704,0.613612095012929,0.369254416383208,0,0.988551862620595,1.25314822272926,0,0.591860433821602,0,0,0.969332746095218,0.185536196323703,3.99227596002388,0,0,0,0.910347586283997,2.54253650292766,0.236387681767936,0.344743373241465,0,0.173624994933292,0.885741385813839,0.844175070377856,0,1.21637185924347,0,0,0,0.557694977114413,0.153900517007594,0.227884111694002,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0.317873157960757,0.421996129056054,0.652931232636591,0,0,2.98578579323551,0.619202951523374,1.83309043480088,0.296521128680622,0,0,0.202203398942031,0,0.234264445725339,0,1.56531695145672,0.242780379534093,0,1.20990716048664,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0.173559738335131,0.979923974143776,0.783532859223623,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.137041924646751,0.19871461170299,0.316553979779393,0.782205530939212,0.801588202515337,0.426905989478705,0,0.864542502924636,0,0,0.432164393964449,0.248505071130865,1.17847017308398,0,0,0.101998217636322,1.44475294950759,0,1.09524303113594,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.551482276150566,0.164831716762333,0.26961417541674,0.295282444544246,0,0.795229689809303,0.953423842781029,0,0,0,0,4.6428117273477,0.303747783290123,1.67717343799633,0,0.104909176269996,1.05600336519407,0,1.34340638123612,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.387848869084652,0.66116300871345,0.513260513652988,0,0.320362237703084,0,0,0,0,0,0.638341257770182,0,0,0,0,1.57054096250234,0,0.244052529803926,1.001527445652,0.573409195690071,0.221858103073705,0.434674820589684,0,0.124980407962107,0.758245587708239,1.42732666772484,0.235265819698172,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0.553033744606923,0,0,0,0.327609848846413,1.72041036127604,0.422624246717254,0,0,0,0,0,0,0,0.383683113910955,0.754773679776773,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.159633859057151,0,0.252071696221718,0,0.322951291263702,0,0.88332946650923,0.589848616738702,0.733714394086716,0.115525666150338,0.381382095467167,0.690359926060101,0.198916222116275,0,0,0.781514011233092,0,0,4.5835386727284,0.135075169236789,0,0.620060389503552,0.0634158101939068,0,0,0,0,1.78867398695433,0,0,0,0.227662191351298,0.0887023701626388,0,0.685952037749674,0.203909198930495,0.197318320688547,0.590969204419841,1.00108261702862,0.078493092850514,0.314231179832004,0.280272163313789,0.913158720509496,0.647782773655864,1.43325506366115,0.285906176706625,0,1.97610423125813,0,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0,0,1.78968690876468,0.883352102537187,0.853425474875886,0,0,0,0.971421986118279,0,2.38740930193642,0,0,0,1.05673990496671,0.771741581079447,0.218559560503957,0.470317296361523,0,0.471353094203252,0.392616934229891,0.297046400327086,2.9585900930838,0,0,0,0,1.07132363163395,0.705789743431384,0.401206833445841,0,0,0.430018749454354,0.15777156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| |||
|short_description=p@chr17:70560894..70560899,- | |||
}} |
Revision as of 17:07, 20 January 2014
Short description: | p@chr17:70560894..70560899, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:70560894..70560899, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 3.75e-12 | 2 |
bladder cell | 4.97e-07 | 1 |
lower urinary tract cell | 4.97e-07 | 1 |
serous secreting cell | 6.24e-07 | 1 |
mucus secreting cell | 6.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.13e-07 | 1 |
extrahepatic bile duct | 3.13e-07 | 1 |
common bile duct | 3.13e-07 | 1 |
duodenal papilla | 3.13e-07 | 1 |
urinary bladder urothelium | 4.97e-07 | 1 |
wall of urinary bladder | 4.97e-07 | 1 |
mucosa of urinary bladder | 4.97e-07 | 1 |
epithelium of female gonad | 6.24e-07 | 1 |
maxillary sinus | 7.82e-07 | 1 |
paranasal sinus | 7.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.15e-13 | 143 |
carcinoma | 9.57e-13 | 106 |
non-small cell lung carcinoma | 2.39e-10 | 5 |
lung carcinoma | 1.01e-09 | 9 |
cancer | 3.98e-09 | 235 |
disease of cellular proliferation | 7.91e-09 | 239 |
respiratory system cancer | 3.12e-08 | 16 |
lung large cell carcinoma | 5.85e-08 | 3 |
ovary epithelial cancer | 6.24e-07 | 1 |
mucinous adenocarcinoma | 6.99e-07 | 1 |
skin squamous cell carcinoma | 7.39e-07 | 1 |
keratoacanthoma | 7.39e-07 | 1 |
paranasal sinus cancer | 7.82e-07 | 1 |
maxillary sinus cancer | 7.82e-07 | 1 |