FFCP PHASE1:Hg19::chr17:39553852..39553863,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6448 | |||
|TSSclassifier=strong | |||
|UniProt=Q15323 | |||
|association_with_transcript=-8bp_to_ENST00000251645,NM_002277,uc002hwn.2,uc010cxn.2_5end | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRT31_5end | |||
|id=chr17:39553852..39553863,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000312;1.04e-18;5!CL:0000240;9.04e-16;6!CL:0000311;9.04e-16;6!CL:0000079;9.04e-16;6!CL:0000237;9.04e-16;6!CL:0000362;7.58e-11;9!CL:0002159;2.68e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,1.04e-18,5;CL:0000240,9.04e-16,6;CL:0000311,9.04e-16,6;CL:0000079,9.04e-16,6;CL:0000237,9.04e-16,6;CL:0000036,9.04e-16,6;CL:0000357,9.04e-16,6;CL:0000114,9.04e-16,6;CL:0000362,7.58e-11,9;CL:0002159,2.68e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.62e-23;1!UBERON:0000358;3.67e-23;1!CL:0000357;9.04e-16;6!CL:0000114;9.04e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;6.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,6.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000200!4.91e-14!6;UBERON:0001630!2.14e-12!2;UBERON:0005090!2.14e-12!2;UBERON:0007023!3.61e-11!115;UBERON:0001872!3.51e-10!5;UBERON:0001042!3.93e-09!10;UBERON:0009145!3.93e-09!10;UBERON:0001869!5.38e-09!32;UBERON:0001950!1.58e-08!20;UBERON:0001893!2.04e-08!34;UBERON:0006562!2.62e-08!11;UBERON:0002771!8.33e-08!3;UBERON:0002619!9.71e-08!22;UBERON:0007029!2.95e-07!1;UBERON:0002426!4.69e-07!1;UBERON:0003831!4.69e-07!1;UBERON:0003898!4.69e-07!1;UBERON:0004830!4.69e-07!1;UBERON:0001774!4.69e-07!1;UBERON:0003830!4.69e-07!1;UBERON:0005175!4.69e-07!1;UBERON:0003897!4.69e-07!1;UBERON:0001103!4.69e-07!1;UBERON:0010084!4.69e-07!1;UBERON:0005418!5.26e-07!1;UBERON:0001389!5.26e-07!1;UBERON:0000026!5.26e-07!1;UBERON:0008784!5.26e-07!1;UBERON:0006058!5.26e-07!1;UBERON:0003663!5.26e-07!1;UBERON:0001383!5.26e-07!1;UBERON:0004256!5.26e-07!1;UBERON:0002529!5.26e-07!1;UBERON:0004708!5.26e-07!1;UBERON:0002101!5.26e-07!1;UBERON:0004709!5.26e-07!1;UBERON:0003661!5.26e-07!1;UBERON:0002471!5.26e-07!1;UBERON:0004357!5.26e-07!1;UBERON:0009872!5.26e-07!1;UBERON:0004347!5.26e-07!1;UBERON:0005420!5.26e-07!1;UBERON:0005732!5.26e-07!1;UBERON:0006057!5.26e-07!1;UBERON:0000978!5.26e-07!1;UBERON:0002103!5.26e-07!1;UBERON:0001665!5.26e-07!1;UBERON:0003823!5.26e-07!1;UBERON:0000154!5.26e-07!1;UBERON:0005733!5.26e-07!1;UBERON:0005730!5.26e-07!1;UBERON:0000989!6.60e-07!1;UBERON:0008811!6.60e-07!1;UBERON:0006258!6.60e-07!1;UBERON:0005876!6.60e-07!1;UBERON:0004874!6.60e-07!1;UBERON:0002372!7.82e-07!1;UBERON:0001961!7.82e-07!1;UBERON:0001744!7.82e-07!1;UBERON:0001735!7.82e-07!1;UBERON:0002780!7.96e-07!41;UBERON:0001890!7.96e-07!41;UBERON:0006240!7.96e-07!41;UBERON:0003112!8.27e-07!1;UBERON:0000032!8.27e-07!1;UBERON:0005253!8.27e-07!1;UBERON:0003128!8.27e-07!1;UBERON:0002241!8.27e-07!1;UBERON:0001703!8.27e-07!1;UBERON:0004761!8.27e-07!1;UBERON:0009617!8.27e-07!1;UBERON:0000956!8.79e-07!25;UBERON:0000203!8.79e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.07e-23;1!UBERON:0002426;6.40e-23;1!UBERON:0003831;6.40e-23;1!UBERON:0003898;6.40e-23;1!UBERON:0004830;6.40e-23;1!UBERON:0003830;6.40e-23;1!UBERON:0005175;6.40e-23;1!UBERON:0001774;6.40e-23;1!UBERON:0001103;6.40e-23;1!UBERON:0001003;4.94e-14;15!UBERON:0007376;4.94e-14;15!UBERON:0000341;3.24e-12;2!UBERON:0005090;3.62e-12;2!UBERON:0001630;3.62e-12;2!UBERON:0001043;1.12e-08;3!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0010371;5.57e-07;31!UBERON:0000014;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.07e-23,1;UBERON:0002426,6.40e-23,1;UBERON:0003831,6.40e-23,1;UBERON:0003898,6.40e-23,1;UBERON:0004830,6.40e-23,1;UBERON:0003830,6.40e-23,1;UBERON:0005175,6.40e-23,1;UBERON:0001774,6.40e-23,1;UBERON:0001103,6.40e-23,1;UBERON:0010084,6.40e-23,1;UBERON:0001003,4.94e-14,15;UBERON:0007376,4.94e-14,15;UBERON:0007383,4.94e-14,15;UBERON:0000341,3.24e-12,2;UBERON:0005090,3.62e-12,2;UBERON:0001630,3.62e-12,2;UBERON:0001043,1.12e-08,3;UBERON:0009143,1.12e-08,3;UBERON:0001723,1.30e-08,3;UBERON:0001033,1.30e-08,3;UBERON:0010056,1.30e-08,3;UBERON:0000014,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8602629886429,19.603149620268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33439590686307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,65.5709840629838,0,0,0,23.9445693922595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0,0.387533459016037,0.496597714366863,0,0,0,0,4.10679961302337,0.336760265072938,0.286888821570705,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p1@KRT31 | |||
}} |
Revision as of 15:16, 20 January 2014
Short description: | p1@KRT31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT31_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -8bp_to_ENST00000251645, NM_002277, uc002hwn.2, uc010cxn.2_5end |
EntrezGene: | KRT31 |
HGNC: | 6448 |
UniProt: | Q15323 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 1.04e-18 | 5 |
stratified squamous epithelial cell | 9.04e-16 | 6 |
keratin accumulating cell | 9.04e-16 | 6 |
stratified epithelial cell | 9.04e-16 | 6 |
keratinizing barrier epithelial cell | 9.04e-16 | 6 |
epithelial fate stem cell | 9.04e-16 | 6 |
stratified epithelial stem cell | 9.04e-16 | 6 |
surface ectodermal cell | 9.04e-16 | 6 |
epidermal cell | 7.58e-11 | 9 |
general ecto-epithelial cell | 2.68e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
surface | 1.07e-23 | 1 |
chest muscle | 6.40e-23 | 1 |
respiratory system muscle | 6.40e-23 | 1 |
skeletal muscle of trunk | 6.40e-23 | 1 |
respiratory system skeletal muscle | 6.40e-23 | 1 |
thoracic segment muscle | 6.40e-23 | 1 |
chest organ | 6.40e-23 | 1 |
muscle of trunk | 6.40e-23 | 1 |
diaphragm | 6.40e-23 | 1 |
future diaphragm | 6.40e-23 | 1 |
skin epidermis | 4.94e-14 | 15 |
outer epithelium | 4.94e-14 | 15 |
enveloping layer of ectoderm | 4.94e-14 | 15 |
throat | 3.24e-12 | 2 |
muscle structure | 3.62e-12 | 2 |
muscle organ | 3.62e-12 | 2 |
esophagus | 1.12e-08 | 3 |
esophageal region | 1.12e-08 | 3 |
tongue | 1.30e-08 | 3 |
gustatory system | 1.30e-08 | 3 |
future tongue | 1.30e-08 | 3 |
zone of skin | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 6.87e-07 | 4 |