FFCP PHASE1:Hg19::chr17:27441287..27441300,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399687 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31104 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000533399_5end | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_16_at_MYO18A_5end | |||
|id=chr17:27441287..27441300,- | |||
|ontology_enrichment_celltype=CL:0002194!3.65e-62!63;CL:0000576!3.65e-62!63;CL:0000040!3.65e-62!63;CL:0000559!3.65e-62!63;CL:0002009!4.72e-60!65;CL:0000839!2.72e-55!70;CL:0000557!2.03e-54!71;CL:0000766!2.15e-50!76;CL:0002057!1.54e-44!42;CL:0000860!3.33e-41!45;CL:0000763!3.61e-34!112;CL:0000049!3.61e-34!112;CL:0002087!1.26e-29!119;CL:0002031!3.86e-28!124;CL:0000738!4.31e-24!140;CL:0002032!8.42e-21!165;CL:0000837!8.42e-21!165;CL:0000037!1.19e-19!172;CL:0000566!1.19e-19!172;CL:0000988!3.70e-18!182;CL:0000235!1.85e-10!10;CL:0000840!1.61e-07!5;CL:0001029!1.61e-07!5;CL:0000134!7.87e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.30e-39;33!CL:0002057;8.30e-39;33!CL:0000473;6.95e-35;39!CL:0000234;6.95e-35;39!CL:0000840;1.05e-18;5!CL:0000576;2.76e-18;48!CL:0000766;3.12e-17;69!CL:0000990;1.12e-12;8!CL:0000451;1.80e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,9.13e-42,59;CL:0000576,9.13e-42,59;CL:0000040,9.13e-42,59;CL:0000559,9.13e-42,59;CL:0002009,2.30e-40,61;CL:0000839,3.17e-37,66;CL:0000557,1.18e-36,67;CL:0000766,5.02e-34,72;CL:0000473,4.32e-33,48;CL:0000234,4.32e-33,48;CL:0000860,8.50e-32,42;CL:0002057,8.50e-32,42;CL:0000763,3.36e-22,108;CL:0000049,3.36e-22,108;CL:0002087,9.47e-21,115;CL:0002031,8.14e-20,120;CL:0000840,1.08e-18,5;CL:0001029,1.08e-18,5;CL:0000738,2.78e-17,136;CL:0002032,2.55e-14,161;CL:0000837,2.55e-14,161;CL:0000037,1.20e-13,168;CL:0000988,7.41e-13,177;CL:0000990,1.15e-12,8;CL:0000451,1.83e-10,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-29;42!UBERON:0010122;2.35e-07;2!CL:0000049;4.56e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.56e-47!80;UBERON:0001474!9.86e-44!86;UBERON:0004765!3.45e-36!101;UBERON:0001434!3.45e-36!101;UBERON:0002390!9.17e-36!102;UBERON:0003061!9.17e-36!102;UBERON:0002193!6.25e-32!112;UBERON:0002405!6.56e-31!115;UBERON:0002204!6.23e-22!167;UBERON:0003081!3.06e-15!216;UBERON:0000369!8.81e-11!4;UBERON:0002435!8.81e-11!4;UBERON:0000204!8.81e-11!4;UBERON:0010082!8.81e-11!4;UBERON:0002420!5.32e-08!9;UBERON:0007245!5.32e-08!9;UBERON:0010009!5.32e-08!9;UBERON:0010011!5.32e-08!9;UBERON:0000454!5.32e-08!9;UBERON:0000349!6.38e-08!5;UBERON:0005383!3.97e-07!3;UBERON:0005382!3.97e-07!3;UBERON:0000062!4.60e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;5.74e-17;3!UBERON:0005382;5.74e-17;3!UBERON:0001874;2.78e-13;1!UBERON:0000369;5.72e-13;4!UBERON:0002435;5.72e-13;4!UBERON:0000204;5.72e-13;4!UBERON:0009663;8.64e-08;7!UBERON:0001873;2.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.62e-32,76;UBERON:0001474,1.02e-29,82;UBERON:0004765,5.99e-27,90;UBERON:0002405,4.95e-26,93;UBERON:0002390,1.26e-24,98;UBERON:0003061,1.26e-24,98;UBERON:0001434,4.20e-24,100;UBERON:0002193,3.36e-22,108;UBERON:0005383,5.30e-17,3;UBERON:0005382,5.30e-17,3;UBERON:0002204,9.72e-14,167;UBERON:0001874,2.62e-13,1;UBERON:0000369,5.39e-13,4;UBERON:0002435,5.39e-13,4;UBERON:0000204,5.39e-13,4;UBERON:0010082,5.39e-13,4;UBERON:0003081,5.79e-11,203;UBERON:0009663,8.35e-08,7;UBERON:0001873,2.28e-07,2;UBERON:0010122,2.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0.77272670290256,0.581592955118259,1.51150377475524,0.242584061187816,1.16214518452842,1.23350366406548,1.54853185447552,1.7261543539329,1.7931249457037,0,1.03423704220986,0,0,2.07066573496865,0.545812300115692,0.224723484445085,0.612167784741805,0.962787081228281,0.639337125799041,0.329851300186716,0.797854630486527,0,0,0.56738522469114,0,1.25624332628372,1.5644487552606,1.08594422352558,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16640047943898,4.35324343248168,5.05240249971688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.936017060556951,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42683973814336,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,3.92788974790005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p16@MYO18A | |||
}} |
Revision as of 14:28, 20 January 2014
Short description: | p16@MYO18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MYO18A_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -1bp_to_ENST00000533399_5end |
EntrezGene: | MYO18A |
HGNC: | 31104 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 9.13e-42 | 59 |
monocyte | 9.13e-42 | 59 |
monoblast | 9.13e-42 | 59 |
promonocyte | 9.13e-42 | 59 |
macrophage dendritic cell progenitor | 2.30e-40 | 61 |
myeloid lineage restricted progenitor cell | 3.17e-37 | 66 |
granulocyte monocyte progenitor cell | 1.18e-36 | 67 |
myeloid leukocyte | 5.02e-34 | 72 |
defensive cell | 4.32e-33 | 48 |
phagocyte | 4.32e-33 | 48 |
classical monocyte | 8.50e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.50e-32 | 42 |
myeloid cell | 3.36e-22 | 108 |
common myeloid progenitor | 3.36e-22 | 108 |
nongranular leukocyte | 9.47e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 8.14e-20 | 120 |
immature conventional dendritic cell | 1.08e-18 | 5 |
common dendritic progenitor | 1.08e-18 | 5 |
leukocyte | 2.78e-17 | 136 |
hematopoietic oligopotent progenitor cell | 2.55e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.55e-14 | 161 |
hematopoietic stem cell | 1.20e-13 | 168 |
hematopoietic cell | 7.41e-13 | 177 |
conventional dendritic cell | 1.15e-12 | 8 |
dendritic cell | 1.83e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.62e-32 | 76 |
bone element | 1.02e-29 | 82 |
skeletal element | 5.99e-27 | 90 |
immune system | 4.95e-26 | 93 |
hematopoietic system | 1.26e-24 | 98 |
blood island | 1.26e-24 | 98 |
skeletal system | 4.20e-24 | 100 |
hemolymphoid system | 3.36e-22 | 108 |
caudate-putamen | 5.30e-17 | 3 |
dorsal striatum | 5.30e-17 | 3 |
musculoskeletal system | 9.72e-14 | 167 |
putamen | 2.62e-13 | 1 |
corpus striatum | 5.39e-13 | 4 |
striatum | 5.39e-13 | 4 |
ventral part of telencephalon | 5.39e-13 | 4 |
future corpus striatum | 5.39e-13 | 4 |
lateral plate mesoderm | 5.79e-11 | 203 |
telencephalic nucleus | 8.35e-08 | 7 |
caudate nucleus | 2.28e-07 | 2 |
future caudate nucleus | 2.28e-07 | 2 |