FFCP PHASE1:Hg19::chr16:8963020..8963054,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23589 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17150 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2V2 | |||
|association_with_transcript=-157bp_to_ENST00000311052,NM_014316,uc002czi.1_5end | |||
|description=CAGE_peak_6_at_CARHSP1_5end | |||
|id=chr16:8963020..8963054,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.27e-14;2!CL:0000242;1.27e-14;2!CL:0000037;3.69e-08;1!CL:0001024;3.69e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.57e-14,2;CL:0001024,2.17e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.69e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;3.69e-08;1!DOID:171;6.37e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.89e-08,1;DOID:171,7.42e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.39e-07!90;UBERON:0001017!2.00e-07!82;UBERON:0000955!4.40e-07!69;UBERON:0006238!4.40e-07!69;UBERON:0000153!6.22e-07!129;UBERON:0007811!6.22e-07!129;UBERON:0005743!7.17e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.37e-16;4!UBERON:0000923;1.37e-16;4!UBERON:0010316;1.37e-16;4!UBERON:0005291;1.37e-16;4!UBERON:0002050;2.21e-13;5!UBERON:0005423;2.21e-13;5!UBERON:0005383;9.83e-11;3!UBERON:0005382;9.83e-11;3!UBERON:0001874;1.26e-08;1!UBERON:0000369;2.94e-08;4!UBERON:0002435;2.94e-08;4!UBERON:0000204;2.94e-08;4!UBERON:0001154;3.69e-08;1!UBERON:0001153;3.69e-08;1!UBERON:0009854;3.69e-08;1!UBERON:0000922;8.69e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,9.18e-11,3;UBERON:0005382,9.18e-11,3;UBERON:0001874,1.13e-08,1;UBERON:0001154,2.69e-08,1;UBERON:0001153,2.69e-08,1;UBERON:0001045,2.69e-08,1;UBERON:0000369,2.79e-08,4;UBERON:0002435,2.79e-08,4;UBERON:0000204,2.79e-08,4;UBERON:0010082,2.79e-08,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0.940364164434263,0.572471974262113,0.136874425072884,0.125542639594803,0.0764134057479513,0.328402357799783,0.236132343941038,0.393364276848904,0.383829398097213,0,0,0,0,0.309868802321207,0,1.46800219667424,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0.569212969109448,1.17447437874188,1.14681968437569,0,0,0.790152254325231,0.196709770113833,0.393010762749165,0,0.501559486172034,0.651844533267181,0.473447805734733,0,0.222820913770347,0.883817722424512,0.221533894583621,0.270803863765016,0.896639238079726,0.650296737799391,0.657751618414705,0,0,0.889719378972363,1.07016331235885,1.04535523804977,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0.868946423296794,0,0,0.639312809217652,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0.653847612453835,0.454072282934794,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0,0,0,0.375355559615893,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0,0,0,0.193260853163297,0,0.286804595389004,0.731842236777572,0.662648841607426,0.580969714347592,0.207322110030741,0.504641701751257,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,0,3.09024169590255,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0,0.144366447761074,0,0,0.790204397959275,0,0.246217006087397,0,0.297262324577456,0.93733833986777,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0.799266537048298,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.394061520403854,0,1.15508732651774,0.254094624222463,0,1.54657762555539,1.34013012267479,0,0,0,0.414415513436035,0.12269149171914,0,0.813795071099207,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0.0868836144680828,0.783204629850962,0.343143423810856,0,0,0.533637789017222,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0,0,0,0.412164046590889,0.27470839445503,0.082509499920588,0,0,0,0.290012154876366,0.616194468458578,0.15350367472613,0.275673144969061,0.429680979473094,0,0,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0.66343897524122,0,0,0.655894752046633,0,0,0,0.286822704408103,0.196498082026242,0,0.354761064070598,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0,0,0.721346064882224,0,1.11598390910176,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.802940375518498,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0,0,0.211125408127993,0,1.38141957765574,0.251932747854276,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0.649376687132959,0,0,0.0874599999961957,0,0.1137934482855,0,0,0.344743373241465,0,0,0,7.5975756334007,0,0,0,0,0,0.139423744278603,0.461701551022782,0,0,0.0897576444097721,0.217294743844016,0.31900115973192,0.183195186803725,0,2.04386596391473,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,1.53036380815245,0,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0.219267951258557,0.246346371159628,0.387956065953678,0.0882561266915003,0.225980740780532,0,0.397429223405979,0.0633107959558787,0,0,0,0,0.144090417154106,0,0.514784993585894,0,0.124252535565433,0,0.543616824294456,0.209205692624666,0.101998217636322,0,0,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0.551482276150566,0.247247575143499,0,0,0.169346664131569,0,0.272406812223151,0.803765742325096,0.550157746388935,0.415440338029185,0,0,0.242998226632099,0,0.394028536495991,0.209818352539992,0,0,0.3838303946388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| |||
|short_description=p6@CARHSP1 | |||
}} |
Revision as of 02:16, 12 January 2014
Short description: | p6@CARHSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CARHSP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -157bp_to_ENST00000311052, NM_014316, uc002czi.1_5end |
EntrezGene: | CARHSP1 |
HGNC: | 17150 |
UniProt: | Q9Y2V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.57e-14 | 2 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.17e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 9.18e-11 | 3 |
dorsal striatum | 9.18e-11 | 3 |
putamen | 1.13e-08 | 1 |
vermiform appendix | 2.69e-08 | 1 |
caecum | 2.69e-08 | 1 |
midgut | 2.69e-08 | 1 |
corpus striatum | 2.79e-08 | 4 |
striatum | 2.79e-08 | 4 |
ventral part of telencephalon | 2.79e-08 | 4 |
future corpus striatum | 2.79e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.89e-08 | 1 |
neuroectodermal tumor | 7.42e-07 | 10 |