FFCP PHASE1:Hg19::chr16:88901909..88901912,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=2588 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4122 | |||
|TSSclassifier=weak | |||
|UniProt=Q9HAL1 | |||
|association_with_transcript=-213bp_to_AK021488_5end | |||
|description=CAGE_peak_4_at_GALNS_5end | |||
|id=chr16:88901909..88901912,- | |||
|ontology_enrichment_celltype=CL:0002603!1.23e-15!3;CL:0000128!2.43e-11!7;CL:0000126!2.43e-11!7;CL:0000127!2.43e-11!7;CL:0002453!2.43e-11!7 | |||
|ontology_enrichment_celltype_v019=CL:0002603;4.06e-27;3!CL:0000128;3.15e-12;7!CL:0000126;3.15e-12;7!CL:0000127;3.15e-12;7!CL:0000062;8.27e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,3.11e-27,3;CL:0000128,2.82e-12,7;CL:0000126,2.82e-12,7;CL:0000127,2.82e-12,7;CL:0002453,2.82e-12,7;CL:0000062,3.03e-08,11;CL:0000375,3.03e-08,11;CL:0000335,3.03e-08,11 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.71e-21;1!CL:0000335;3.43e-08;11!UBERON:0009847;5.18e-08;3!UBERON:0003353;5.18e-08;3!UBERON:0006595;8.64e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-23!115;UBERON:0003076!1.04e-14!15;UBERON:0003057!1.04e-14!15;UBERON:0004733!9.36e-14!12;UBERON:0002028!9.36e-14!12;UBERON:0007277!9.36e-14!12;UBERON:0004732!1.19e-12!13;UBERON:0002680!5.64e-09!9;UBERON:0001895!5.64e-09!9;UBERON:0010092!5.64e-09!9;UBERON:0002037!4.92e-08!6;UBERON:0006215!4.92e-08!6;UBERON:0001896!8.76e-07!3;UBERON:0005290!8.76e-07!3;UBERON:0010096!8.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;5.71e-21;1!UBERON:0002037;4.24e-14;6!UBERON:0002680;1.01e-09;9!UBERON:0001895;1.01e-09;9!UBERON:0005409;1.81e-08;22!UBERON:0002110;7.02e-08;3!UBERON:0004733;1.62e-07;12!UBERON:0002028;1.62e-07;12!UBERON:0004732;5.26e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,6.31e-21,1;UBERON:0002037,3.71e-14,6;UBERON:0006215,3.71e-14,6;UBERON:0002680,9.24e-10,9;UBERON:0001895,9.24e-10,9;UBERON:0010092,9.24e-10,9;UBERON:0002110,8.29e-08,3;UBERON:0006242,8.29e-08,3;UBERON:0004733,1.52e-07,12;UBERON:0002028,1.52e-07,12;UBERON:0007277,1.52e-07,12;UBERON:0005409,1.56e-07,25;UBERON:0004732,4.95e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84681587115182,1.42800483870977,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38080608527693,1.98022799809411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12298154808014,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.676892955143315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31196068783506,0.218559560503957,0,0,0,0,0.594092800654172,0,0.169927114687817,0,0,0,0,0,0,3.65168194123259,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.985123076837112,0,0,0,0,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0.201273793591026,0 | |||
|short_description=p4@GALNS | |||
}} |
Revision as of 12:47, 20 January 2014
Short description: | p4@GALNS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GALNS_5end |
Coexpression cluster: | NA |
Association with transcript: | -213bp_to_AK021488_5end |
EntrezGene: | GALNS |
HGNC: | 4122 |
UniProt: | Q9HAL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 3.11e-27 | 3 |
oligodendrocyte | 2.82e-12 | 7 |
macroglial cell | 2.82e-12 | 7 |
astrocyte | 2.82e-12 | 7 |
oligodendrocyte precursor cell | 2.82e-12 | 7 |
osteoblast | 3.03e-08 | 11 |
osteoprogenitor cell | 3.03e-08 | 11 |
mesenchyme condensation cell | 3.03e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
vagina | 6.31e-21 | 1 |
cerebellum | 3.71e-14 | 6 |
rhombic lip | 3.71e-14 | 6 |
regional part of metencephalon | 9.24e-10 | 9 |
metencephalon | 9.24e-10 | 9 |
future metencephalon | 9.24e-10 | 9 |
gallbladder | 8.29e-08 | 3 |
gall bladder primordium | 8.29e-08 | 3 |
segmental subdivision of hindbrain | 1.52e-07 | 12 |
hindbrain | 1.52e-07 | 12 |
presumptive hindbrain | 1.52e-07 | 12 |
gastrointestinal system | 1.56e-07 | 25 |
segmental subdivision of nervous system | 4.95e-07 | 13 |