FFCP PHASE1:Hg19::chr16:787728..787761,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64428 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14179 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=127bp_to_uc002cjp.2_5end | |||
|description=CAGE_peak_2_at_NARFL_5end | |||
|id=chr16:787728..787761,- | |||
|ontology_enrichment_celltype=CL:0000945!2.46e-17!24;CL:0000826!2.46e-17!24;CL:0002322!6.01e-12!5;CL:0000542!9.61e-11!53;CL:0000051!9.61e-11!53;CL:0000236!3.00e-10!14;CL:0000838!1.15e-09!52;CL:0000349!4.70e-09!3;CL:0002577!4.70e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;6.80e-20;3!CL:0002536;1.53e-13;2!CL:0000945;7.08e-12;24!CL:0000349;3.44e-08;19!CL:0000817;4.57e-08;1!CL:0000037;5.58e-08;1!CL:0001024;5.58e-08;1!CL:0002032;7.26e-08;1!CL:0000785;7.26e-08;1!CL:0000557;7.26e-08;1!CL:0000819;7.26e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.62e-20,3;CL:0002536,1.35e-13,2;CL:0000945,7.72e-12,24;CL:0000826,7.72e-12,24;CL:0000817,9.14e-10,3;CL:0000838,2.95e-08,52;CL:0000349,3.18e-08,19;CL:0000542,4.50e-08,53;CL:0000051,4.50e-08,53;CL:0001024,5.58e-08,1;CL:0000819,7.76e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.31e-07;1 | |||
|ontology_enrichment_disease=DOID:2531!1.24e-07!51;DOID:0060083!1.24e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.89e-10;10!DOID:0060073;7.26e-08;1!DOID:8675;7.26e-08;1!DOID:630;1.30e-07;1!DOID:0050177;1.30e-07;1!DOID:0050427;1.30e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.89e-10,10;DOID:2531,1.10e-08,51;DOID:0060083,1.10e-08,51;DOID:0060073,7.76e-08,1;DOID:8675,7.76e-08,1;DOID:630,1.22e-07,1;DOID:0050177,1.22e-07,1;DOID:0050427,1.22e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.14e-08!7;UBERON:0002106!1.85e-07!3;UBERON:0004854!1.85e-07!3;UBERON:0009034!1.85e-07!3;UBERON:0002095!1.85e-07!3;UBERON:0004782!1.85e-07!3;UBERON:0003281!1.85e-07!3;UBERON:0009664!1.85e-07!3;UBERON:0002296!1.85e-07!3;UBERON:0005602!1.85e-07!3;UBERON:0001179!1.85e-07!3;UBERON:0006293!1.85e-07!3;UBERON:0003135!2.80e-07!11;UBERON:0001987!7.46e-07!4;UBERON:0004340!7.46e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.60e-15;4!UBERON:0002370;8.11e-14;2!UBERON:0005058;8.11e-14;2!UBERON:0009113;8.11e-14;2!UBERON:0001154;2.31e-07;1!UBERON:0001301;2.31e-07;1!UBERON:0001153;2.31e-07;1!UBERON:0009854;2.31e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.99e-15,4;UBERON:0004340,3.99e-15,4;UBERON:0005631,3.03e-11,14;UBERON:0000158,3.03e-11,14;UBERON:0003124,7.47e-09,7;UBERON:0001301,1.69e-07,1;UBERON:0001154,2.17e-07,1;UBERON:0001153,2.17e-07,1;UBERON:0001045,2.17e-07,1;UBERON:0002370,2.55e-07,4;UBERON:0005058,2.55e-07,4;UBERON:0009113,2.55e-07,4;UBERON:0003295,2.55e-07,4;UBERON:0005562,2.55e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.18441372130172,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,1.23150884174919,0.393553906568396,0,0,0,0,0.30120591877825,0,0,1.84820002233648,9.68881449804996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,5.28685314316103,1.68152568894461,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.265059536642971,0.69716365721711,0.310983165046111,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06340959063441,0.122988438543114,0,0.439001141634502,0,0,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,1.81876542867756,6.65741758041988,15.4219049598137,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,1.35359883872224,0.231046011313244,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.929015875628594,24.6700354189721,0,4.14508309094938,0,0,11.2186998843658,0.324621940274555,3.36956613736151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0.902382642468723,0.392125068635479,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10873409803865,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,5.10986352267889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1788456504637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.845855261818682,0.257831551894309,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.509944148709909,0.26721740526556,0.275684698604535,0,0.454672189309436,0,0,0,0,0.23806443146374,3.03567876229229,3.22788514338461,0,0,0,0,0,0.673520530145875,0,0,0,0,0,0,0,0,0,0,2.01273793591026,2.24397944612263 | |||
|short_description=p2@NARFL | |||
}} |
Revision as of 01:42, 12 January 2014
Short description: | p2@NARFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NARFL_5end |
Coexpression cluster: | NA |
Association with transcript: | 127bp_to_uc002cjp.2_5end |
EntrezGene: | NARFL |
HGNC: | 14179 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.62e-20 | 3 |
amniotic epithelial cell | 1.35e-13 | 2 |
lymphocyte of B lineage | 7.72e-12 | 24 |
pro-B cell | 7.72e-12 | 24 |
precursor B cell | 9.14e-10 | 3 |
lymphoid lineage restricted progenitor cell | 2.95e-08 | 52 |
extraembryonic cell | 3.18e-08 | 19 |
lymphocyte | 4.50e-08 | 53 |
common lymphoid progenitor | 4.50e-08 | 53 |
CD34-positive, CD38-negative hematopoietic stem cell | 5.58e-08 | 1 |
B-1 B cell | 7.76e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.99e-15 | 4 |
allantois | 3.99e-15 | 4 |
extraembryonic membrane | 3.03e-11 | 14 |
membranous layer | 3.03e-11 | 14 |
chorion | 7.47e-09 | 7 |
epididymis | 1.69e-07 | 1 |
vermiform appendix | 2.17e-07 | 1 |
caecum | 2.17e-07 | 1 |
midgut | 2.17e-07 | 1 |
thymus | 2.55e-07 | 4 |
hemolymphoid system gland | 2.55e-07 | 4 |
thymic region | 2.55e-07 | 4 |
pharyngeal gland | 2.55e-07 | 4 |
thymus primordium | 2.55e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.89e-10 | 10 |
hematologic cancer | 1.10e-08 | 51 |
immune system cancer | 1.10e-08 | 51 |
lymphatic system cancer | 7.76e-08 | 1 |
lymphosarcoma | 7.76e-08 | 1 |
genetic disease | 1.22e-07 | 1 |
monogenic disease | 1.22e-07 | 1 |
xeroderma pigmentosum | 1.22e-07 | 1 |