FFCP PHASE1:Hg19::chr16:67219436..67219445,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1737 | |||
|description=CAGE_peak_at_chr16:67219436..67219445,- | |||
|id=chr16:67219436..67219445,- | |||
|ontology_enrichment_celltype=CL:0000242!8.58e-14!2;CL:0002553!9.71e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0002535;7.14e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.32e-26,2;CL:0002535,7.14e-26,2;CL:0000312,2.66e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000362,7.48e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |||
|ontology_enrichment_disease=DOID:5409!3.74e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.13e-13;4!DOID:4362;3.26e-11;5!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:3905;8.37e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.00e-13,4;DOID:4362,3.26e-11,5;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:305,2.62e-08,106;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.62e-14!94;UBERON:0001016!1.62e-14!94;UBERON:0003296!1.91e-14!4;UBERON:0010133!1.91e-14!4;UBERON:0001894!3.01e-14!7;UBERON:0006222!3.01e-14!7;UBERON:0000955!7.72e-14!69;UBERON:0006238!7.72e-14!69;UBERON:0001905!2.20e-13!2;UBERON:0002757!2.20e-13!2;UBERON:0010134!2.20e-13!2;UBERON:0002784!2.20e-13!2;UBERON:0005408!2.20e-13!2;UBERON:0001899!2.20e-13!2;UBERON:0001017!4.58e-13!82;UBERON:0001049!1.16e-12!57;UBERON:0005068!1.16e-12!57;UBERON:0006241!1.16e-12!57;UBERON:0007135!1.16e-12!57;UBERON:0005743!2.47e-12!86;UBERON:0002616!3.64e-12!59;UBERON:0002346!3.33e-10!90;UBERON:0002780!3.78e-10!41;UBERON:0001890!3.78e-10!41;UBERON:0006240!3.78e-10!41;UBERON:0003080!7.03e-10!42;UBERON:0000924!1.09e-09!173;UBERON:0006601!1.09e-09!173;UBERON:0003075!3.40e-09!86;UBERON:0007284!3.40e-09!86;UBERON:0004121!7.69e-09!169;UBERON:0003056!5.21e-08!61;UBERON:0001874!2.66e-07!1;UBERON:0006834!3.84e-07!1;UBERON:0007190!4.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;7.14e-26;2!UBERON:0004801;7.14e-26;2!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,7.14e-26,2;UBERON:0004801,7.14e-26,2;UBERON:0000002,1.44e-09,6;UBERON:0001560,1.44e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.663475559587348,0.591095237907095,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,3.27834434064817,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862598491173454,0,0.764467467344097,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64910775118144,0.150962843566674,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr16:67219436..67219445,- | |||
}} |
Revision as of 11:53, 20 January 2014
Short description: | p@chr16:67219436..67219445, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:67219436..67219445, - |
Coexpression cluster: | C1737_argyrophil_merkel_neuroblastoma_gastrointestinal_carcinoid_smallcell_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.32e-26 | 2 |
epithelial cell of cervix | 7.14e-26 | 2 |
keratinocyte | 2.66e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
epidermal cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 7.14e-26 | 2 |
cervix epithelium | 7.14e-26 | 2 |
uterine cervix | 1.44e-09 | 6 |
neck of organ | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.00e-13 | 4 |
cervical cancer | 3.26e-11 | 5 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
carcinoma | 2.62e-08 | 106 |
lung carcinoma | 7.91e-07 | 9 |