FFCP PHASE1:Hg19::chr16:55513074..55513088,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7166 | |||
|TSSclassifier=strong | |||
|UniProt=P08253 | |||
|association_with_transcript=0bp_to_NM_004530,uc002ehz.3_5end | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_2_at_MMP2_5end | |||
|id=chr16:55513074..55513088,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.45e-47!180;CL:0000057!1.71e-20!75;CL:0000680!7.37e-20!57;CL:0000056!7.37e-20!57;CL:0000355!7.37e-20!57;CL:0000183!1.92e-19!59;CL:0000187!1.66e-18!54;CL:0000393!1.71e-17!60;CL:0000211!1.71e-17!60;CL:0000192!4.19e-16!42;CL:0000514!4.19e-16!42;CL:0000222!5.99e-14!119;CL:0000359!1.93e-12!32;CL:0000220!5.52e-11!246;CL:0002321!5.94e-11!248;CL:0000144!4.28e-10!625;CL:0002371!3.18e-09!591;CL:0002620!2.00e-08!23;CL:0002334!1.26e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.21e-12;43!CL:0000359;1.55e-12;32!CL:0000187;6.11e-11;55!CL:0000393;6.90e-10;61!CL:0000211;6.90e-10;61!CL:0000134;7.82e-10;55!CL:0000723;1.51e-09;61!CL:0000048;1.95e-09;58!CL:0002620;6.26e-09;23!CL:0000057;1.45e-08;73!CL:0002320;1.65e-08;188!CL:0002334;5.08e-08;12!CL:0000034;2.63e-07;69!CL:0000499;7.17e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.22e-21,76;CL:0000680,1.71e-21,58;CL:0000056,1.71e-21,58;CL:0000355,1.71e-21,58;CL:0000187,4.74e-20,55;CL:0000393,5.81e-19,61;CL:0000211,5.81e-19,61;CL:0000192,1.73e-17,43;CL:0000514,1.73e-17,43;CL:0000359,3.88e-13,32;CL:0000222,5.56e-13,121;CL:0002321,3.20e-09,250;CL:0000048,3.33e-09,427;CL:0002620,7.25e-09,23;CL:0000723,1.71e-08,433;CL:0000034,4.00e-08,441;CL:0002334,5.15e-08,12;CL:0000499,7.43e-07,28;CL:0002494,9.76e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.21e-12;43!CL:0000355;2.76e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!5.60e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.81e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.79e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.35e-22!83;UBERON:0002329!2.35e-22!83;UBERON:0003077!2.35e-22!83;UBERON:0003059!2.35e-22!83;UBERON:0007282!2.35e-22!83;UBERON:0009618!2.35e-22!83;UBERON:0007285!2.35e-22!83;UBERON:0004290!5.17e-21!70;UBERON:0000486!1.09e-20!82;UBERON:0001134!1.35e-19!61;UBERON:0002036!1.35e-19!61;UBERON:0003082!1.35e-19!61;UBERON:0002385!2.06e-19!63;UBERON:0001015!2.06e-19!63;UBERON:0000383!2.06e-19!63;UBERON:0004872!2.59e-16!84;UBERON:0005256!9.78e-16!143;UBERON:0001637!2.08e-13!42;UBERON:0003509!2.08e-13!42;UBERON:0004572!2.08e-13!42;UBERON:0002049!2.93e-13!79;UBERON:0007798!2.93e-13!79;UBERON:0001981!1.62e-12!60;UBERON:0007500!1.62e-12!60;UBERON:0004537!1.62e-12!60;UBERON:0006965!1.62e-12!60;UBERON:0004573!5.55e-12!33;UBERON:0004571!5.55e-12!33;UBERON:0000490!4.32e-11!138;UBERON:0000055!1.01e-10!69;UBERON:0002100!1.04e-10!216;UBERON:0003914!1.81e-10!118;UBERON:0000475!3.93e-10!365;UBERON:0002199!5.41e-10!45;UBERON:0002416!5.41e-10!45;UBERON:0001009!6.60e-10!113;UBERON:0004535!6.87e-10!110;UBERON:0000468!3.78e-09!659;UBERON:0003102!4.18e-09!95;UBERON:0000947!3.13e-08!21;UBERON:0010191!3.13e-08!21;UBERON:0002097!5.66e-08!40;UBERON:0001013!3.75e-07!14;UBERON:0000948!4.77e-07!24;UBERON:0005498!4.77e-07!24;UBERON:0004140!4.77e-07!24;UBERON:0009881!4.77e-07!24;UBERON:0004141!4.77e-07!24;UBERON:0003084!4.77e-07!24;UBERON:0007005!4.77e-07!24;UBERON:0004139!4.77e-07!24;UBERON:0004291!4.77e-07!24;UBERON:0001135!6.61e-07!15;UBERON:0007100!8.95e-07!27;UBERON:0000119!9.99e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.96e-11;33!UBERON:0004571;2.96e-11;33!UBERON:0001637;3.76e-10;42!UBERON:0003509;3.76e-10;42!UBERON:0004572;3.76e-10;42!UBERON:0002385;1.84e-09;31!UBERON:0001015;1.84e-09;31!UBERON:0000383;1.84e-09;31!UBERON:0002384;5.15e-09;198!UBERON:0000947;2.87e-08;21!UBERON:0010191;2.87e-08;21!UBERON:0001013;1.60e-07;14!UBERON:0001135;3.22e-07;15!UBERON:0002199;4.31e-07;46!UBERON:0002416;4.31e-07;46!UBERON:0002204;4.64e-07;70!UBERON:0007500;5.47e-07;56!UBERON:0001981;5.47e-07;56!UBERON:0004537;5.47e-07;56!UBERON:0000948;6.18e-07;22!UBERON:0004457;8.53e-07;9!UBERON:0000042;8.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.40e-22,71;UBERON:0003059,2.40e-22,71;UBERON:0007282,2.40e-22,71;UBERON:0004290,2.40e-22,71;UBERON:0009618,2.40e-22,71;UBERON:0007524,3.91e-22,73;UBERON:0003077,1.42e-21,72;UBERON:0007285,1.42e-21,72;UBERON:0007503,3.18e-21,78;UBERON:0000486,4.37e-21,83;UBERON:0001134,7.93e-21,62;UBERON:0002036,7.93e-21,62;UBERON:0003082,7.93e-21,62;UBERON:0002385,1.23e-20,64;UBERON:0001015,1.23e-20,64;UBERON:0000383,1.23e-20,64;UBERON:0004872,9.55e-17,83;UBERON:0005256,8.22e-16,122;UBERON:0003104,1.14e-14,160;UBERON:0009142,1.14e-14,160;UBERON:0001637,8.79e-14,42;UBERON:0003509,8.79e-14,42;UBERON:0004572,8.79e-14,42;UBERON:0002049,4.65e-13,78;UBERON:0007798,4.65e-13,78;UBERON:0000490,5.01e-13,148;UBERON:0007500,1.29e-12,59;UBERON:0001981,1.29e-12,59;UBERON:0004537,1.29e-12,59;UBERON:0006965,1.29e-12,59;UBERON:0004573,3.04e-12,33;UBERON:0004571,3.04e-12,33;UBERON:0003914,7.44e-11,117;UBERON:0000926,9.77e-11,315;UBERON:0004120,9.77e-11,315;UBERON:0006603,9.77e-11,315;UBERON:0001009,1.02e-10,112;UBERON:0004535,1.05e-10,109;UBERON:0002199,1.06e-10,46;UBERON:0002416,1.06e-10,46;UBERON:0000055,1.70e-10,68;UBERON:0002100,8.91e-10,199;UBERON:0002097,1.49e-08,41;UBERON:0000947,2.95e-08,21;UBERON:0010191,2.95e-08,21;UBERON:0003102,6.70e-08,99;UBERON:0001013,1.64e-07,14;UBERON:0000948,2.12e-07,24;UBERON:0005498,2.12e-07,24;UBERON:0004140,2.12e-07,24;UBERON:0009881,2.12e-07,24;UBERON:0004141,2.12e-07,24;UBERON:0003084,2.12e-07,24;UBERON:0007005,2.12e-07,24;UBERON:0004139,2.12e-07,24;UBERON:0004291,2.12e-07,24;UBERON:0001135,3.00e-07,15;UBERON:0007100,4.13e-07,27 | |||
|phase1_expression=100.831500495159,67.8698660734417,93.7346787238208,73.0535077977852,177.443554487633,76.7657901208324,43.0609792886128,70.7526258238051,150.965293099507,1.96587149201207,1.39560233594486,4.58726881473362,21.1013582582763,25.3721023568096,26.5117900582333,82.0236678671166,81.9664558112609,71.5703888579626,78.0692478064811,48.3865758241776,37.128125806454,50.152755436494,24.6162948932709,8.89683762973747,10.9222096447478,0,0,0,0,0,0.154816123316076,0.919421224478927,2.409647350226,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0.971680998056939,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5710299470943,24.8159318090345,9.84541726195184,20.6020316859203,41.6110465827788,29.6935363869689,84.3003103874165,171.295474346528,5.0103453096956,5.98669373148923,9.48615685485761,5.63210024640164,0,0,0,0,0,0,0,0,9.14307073886843,13.763753521698,11.8027770546582,16.3939303157963,6.71199097935849,7.15306909044175,6.89683389571475,0.516833518338658,0.35576626268671,1.33888245105868,3.22263453687318,0,4.14905497831888,0.735326160691737,25.1144003843345,3.12549048994279,3.81699933464489,2.13961812918312,10.7321646226118,5.69559395740877,8.61048196472914,0,0,0.436094052142534,75.0427647059931,52.5516623408006,99.7041131523538,279.952541850842,44.688216156993,23.5484592059769,43.767088249179,55.500198393861,37.0341132125722,5.25371621071783,6.86539993076527,57.0617502221391,46.0940739583999,11.0131072961884,29.0308871452198,11.409436430889,20.3250205550449,1.40921398372518,2.26622122115384,3.23036855415172,13.474175302823,3.80786383666481,31.72101482096,256.608617172924,165.421575687355,18.2032272387605,25.8702531053846,6.06010010234638,4.50426671539071,6.92660288710457,35.9961649122287,68.0402906673824,202.370665347186,4.99101605904093,75.8818158963886,80.5111355845999,57.0096814119221,141.042815159669,59.1521517828639,60.5455269107229,59.1851603134456,148.185619707832,65.3802304631643,98.9540395036929,89.1963517843881,65.4666530116188,155.13919192976,38.8903099158691,27.468815954299,0.773043412653187,0.545492241181669,0,1.70763188581434,2.12047629314376,3.83440011469411,3.83545903556871,2.52320850875628,3.6497735907583,136.11109312694,223.204605552931,23.4829366299217,32.5057549622385,25.9876613401051,0,0,0,0,0,0,0,0,0,0,7.01208869017229,20.9902745779014,36.7521778463855,0,0,0,0,0.245976877086227,4.46076306776166,1.31700342490351,0,0.603173834469785,0.555530670951178,9.12263254868909,6.23960871167747,1.44331342025273,4.28942498407784,31.582938749436,1.44366447761074,0,1.71228737011138,0,0,0.984868024349589,0.468008530278475,2.22946743433092,1.87467667973554,4.19955320497149,0.992425680696705,1.34337784054272,0,2.30029607499127,0,0,0.621984346622316,0.144119953416961,0.50496973370552,5.01633364908135,2.67391897890794,2.34434894420094,32.503764744314,6.37530454760606,1.50171528921959,15.4346273620512,5.49442313292267,10.0270815831654,3.2268845761218,115.956729034727,82.260982545933,9.298330278116,135.362501341699,107.127660018707,14.40361295868,8.5109479213967,6.39413229638638,45.8959359642654,122.632482818466,22.2274890930808,7.49193223875591,35.5391948742546,11.087326221068,25.0194682959456,30.5036710510103,6.19832545328754,3.64871341923571,0.502257091432126,0,2.15662369942424,6.89171615004683,32.8064881593652,49.0808629603094,57.9443229592081,86.1283233183898,0,0,0,0,24.6471785495789,2.60279707715243,1.54657762555539,3.35032530668698,1.27587750330633,0,0,0,26.0105962444577,45.5155174164306,15.4621063508849,22.0449113222656,37.2916586586068,38.637091683314,52.2450710867501,69.8194951368308,154.63710275807,75.5353420435286,80.3712974227878,56.2325964052195,48.0466388008498,177.787450976168,174.316859295915,0,0,0,1.21251028578504,3.32870879020994,9.97887967987945,161.518182890024,118.77956732496,133.874865044576,104.433406643396,103.364864311474,104.555048743345,41.5570586045975,49.6555214044551,90.7340416350079,67.6727765553787,64.387549218769,56.4782439315402,0.241718899183244,20.8526729115416,0.368323955743585,58.7849974602787,51.5318005459009,71.2005573229673,2.25599806453706,1.00119938235739,1.56869953835371,4.38417673959782,6.75530424914404,5.68666920354483,0.680374821106063,2.80690690932781,4.62681758070868,6.50271450105247,12.0405545725165,0,0,1.56712328305525,0,0.261435451024901,0,7.87235149679294,10.4121086292577,15.5591927588061,6.22672360764735,5.61064599459998,11.4853107599234,12.3511446746939,43.3846610579231,100.537547023807,9.55101426110795,12.7408050022688,4.27293374702045,40.4974323153392,17.6920366575359,9.8010621528516,46.0295624293632,2.97512847649761,2.88285101047659,0.382838137483752,0,18.5938219718914,366.756384057696,72.4918760967024,383.193773739054,45.2460125769469,81.7737012550568,146.220808872993,7.58561899732554,21.9573437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| |||
|short_description=p2@MMP2 | |||
}} |
Revision as of 03:37, 12 January 2014
Short description: | p2@MMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMP2_5end |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | 0bp_to_NM_004530, uc002ehz.3_5end |
EntrezGene: | MMP2 |
HGNC: | 7166 |
UniProt: | P08253 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.22e-21 | 76 |
muscle precursor cell | 1.71e-21 | 58 |
myoblast | 1.71e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.71e-21 | 58 |
muscle cell | 4.74e-20 | 55 |
electrically responsive cell | 5.81e-19 | 61 |
electrically active cell | 5.81e-19 | 61 |
smooth muscle cell | 1.73e-17 | 43 |
smooth muscle myoblast | 1.73e-17 | 43 |
vascular associated smooth muscle cell | 3.88e-13 | 32 |
mesodermal cell | 5.56e-13 | 121 |
embryonic cell | 3.20e-09 | 250 |
multi fate stem cell | 3.33e-09 | 427 |
skin fibroblast | 7.25e-09 | 23 |
somatic stem cell | 1.71e-08 | 433 |
stem cell | 4.00e-08 | 441 |
preadipocyte | 5.15e-08 | 12 |
stromal cell | 7.43e-07 | 28 |
cardiocyte | 9.76e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.79e-07 | 14 |