FFCP PHASE1:Hg19::chr16:23846920..23846941,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9395 | |||
|TSSclassifier=weak | |||
|UniProt=P05771 | |||
|association_with_transcript=-358bp_to_NM_002738,NM_212535,uc002dmd.2,uc002dme.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_PRKCB_5end | |||
|id=chr16:23846920..23846941,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.05e-14;3!UBERON:0006601;3.20e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.26e-73!57;UBERON:0005068!5.26e-73!57;UBERON:0006241!5.26e-73!57;UBERON:0007135!5.26e-73!57;UBERON:0001017!2.19e-64!82;UBERON:0005743!3.01e-64!86;UBERON:0001950!8.04e-64!20;UBERON:0001893!1.93e-63!34;UBERON:0002020!6.75e-63!34;UBERON:0003528!6.75e-63!34;UBERON:0001869!2.14e-62!32;UBERON:0000955!4.41e-62!69;UBERON:0006238!4.41e-62!69;UBERON:0002616!5.73e-62!59;UBERON:0000073!1.73e-60!94;UBERON:0001016!1.73e-60!94;UBERON:0002791!5.18e-60!33;UBERON:0002619!7.77e-58!22;UBERON:0002780!3.55e-56!41;UBERON:0001890!3.55e-56!41;UBERON:0006240!3.55e-56!41;UBERON:0003080!1.03e-54!42;UBERON:0002346!7.46e-52!90;UBERON:0003075!1.19e-51!86;UBERON:0007284!1.19e-51!86;UBERON:0000956!1.39e-50!25;UBERON:0000203!1.39e-50!25;UBERON:0003056!9.38e-39!61;UBERON:0000153!1.16e-35!129;UBERON:0007811!1.16e-35!129;UBERON:0000033!1.24e-35!123;UBERON:0007023!1.94e-34!115;UBERON:0000924!1.17e-30!173;UBERON:0006601!1.17e-30!173;UBERON:0004121!6.70e-30!169;UBERON:0000200!2.79e-23!6;UBERON:0001871!5.58e-23!7;UBERON:0002021!7.04e-20!5;UBERON:0003076!1.62e-18!15;UBERON:0003057!1.62e-18!15;UBERON:0000025!9.94e-16!194;UBERON:0002680!2.07e-14!9;UBERON:0001895!2.07e-14!9;UBERON:0010092!2.07e-14!9;UBERON:0004733!2.91e-14!12;UBERON:0002028!2.91e-14!12;UBERON:0007277!2.91e-14!12;UBERON:0002420!3.97e-14!9;UBERON:0007245!3.97e-14!9;UBERON:0010009!3.97e-14!9;UBERON:0010011!3.97e-14!9;UBERON:0000454!3.97e-14!9;UBERON:0002308!1.08e-13!9;UBERON:0000125!1.08e-13!9;UBERON:0001872!3.21e-13!5;UBERON:0004732!4.32e-13!13;UBERON:0002771!3.78e-12!3;UBERON:0000988!2.62e-11!3;UBERON:0004111!4.46e-11!241;UBERON:0000064!5.04e-11!219;UBERON:0000477!1.30e-09!286;UBERON:0001870!2.88e-09!2;UBERON:0000483!5.92e-09!309;UBERON:0000475!6.49e-09!365;UBERON:0000369!7.59e-09!4;UBERON:0002435!7.59e-09!4;UBERON:0000204!7.59e-09!4;UBERON:0010082!7.59e-09!4;UBERON:0000119!8.71e-09!312;UBERON:0001876!1.72e-08!2;UBERON:0009663!1.87e-08!7;UBERON:0002148!8.13e-08!2;UBERON:0009662!8.13e-08!2;UBERON:0000349!1.91e-07!5;UBERON:0002298!2.59e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.03e-66;20!UBERON:0002619;8.92e-61;22!UBERON:0000956;1.40e-53;25!UBERON:0000203;1.40e-53;25!UBERON:0001869;6.99e-52;32!UBERON:0001893;1.72e-46;34!UBERON:0002791;1.30e-45;32!UBERON:0003528;1.83e-40;34!UBERON:0002020;1.83e-40;34!UBERON:0002780;2.61e-34;41!UBERON:0001890;2.61e-34;41!UBERON:0002021;9.32e-32;5!UBERON:0000073;6.54e-25;53!UBERON:0002616;6.54e-25;53!UBERON:0000955;1.18e-19;68!UBERON:0001872;5.28e-19;5!UBERON:0001016;1.50e-17;83!UBERON:0001017;1.53e-17;75!UBERON:0000200;1.84e-15;6!UBERON:0001870;2.05e-14;3!UBERON:0002581;1.60e-11;1!UBERON:0002022;1.60e-11;1!UBERON:0002902;3.81e-11;1!UBERON:0001882;3.81e-11;1!UBERON:0003112;3.81e-11;1!UBERON:0011158;3.81e-11;1!UBERON:0009899;3.81e-11;1!UBERON:0007190;3.81e-11;1!UBERON:0003128;3.81e-11;1!UBERON:0005403;3.81e-11;1!UBERON:0001703;3.81e-11;1!UBERON:0002241;3.81e-11;1!UBERON:0011216;9.89e-08;132!UBERON:0007023;1.21e-07;114!UBERON:0002037;1.85e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.69e-67,20;UBERON:0002619,7.65e-61,22;UBERON:0001869,4.14e-57,32;UBERON:0001893,9.78e-54,34;UBERON:0000956,1.23e-53,25;UBERON:0000203,1.23e-53,25;UBERON:0002791,3.50e-49,32;UBERON:0003528,2.87e-46,34;UBERON:0002020,2.87e-46,34;UBERON:0000073,8.78e-45,53;UBERON:0002616,8.78e-45,53;UBERON:0002780,1.87e-44,41;UBERON:0001890,1.87e-44,41;UBERON:0003080,1.87e-44,41;UBERON:0006240,1.87e-44,41;UBERON:0000955,1.58e-43,68;UBERON:0006238,1.58e-43,68;UBERON:0001049,2.61e-42,56;UBERON:0005068,2.61e-42,56;UBERON:0006241,2.61e-42,56;UBERON:0007135,2.61e-42,56;UBERON:0001017,2.44e-36,81;UBERON:0001016,1.51e-32,89;UBERON:0002021,6.01e-32,5;UBERON:0003056,1.82e-29,61;UBERON:0003075,2.39e-28,82;UBERON:0007284,2.39e-28,82;UBERON:0002346,6.12e-27,86;UBERON:0010371,6.39e-22,104;UBERON:0010314,3.73e-19,132;UBERON:0001872,6.34e-19,5;UBERON:0007023,2.81e-17,114;UBERON:0004121,5.09e-16,171;UBERON:0000924,5.09e-16,171;UBERON:0006601,5.09e-16,171;UBERON:0000200,1.36e-15,6;UBERON:0011216,5.87e-15,223;UBERON:0001870,1.73e-14,3;UBERON:0002022,1.45e-11,1;UBERON:0002581,1.60e-11,1;UBERON:0002902,2.42e-11,1;UBERON:0009899,2.42e-11,1;UBERON:0007190,2.96e-11,1;UBERON:0001882,4.01e-11,1;UBERON:0005403,4.01e-11,1;UBERON:0003112,4.44e-11,1;UBERON:0011158,4.44e-11,1;UBERON:0003128,4.44e-11,1;UBERON:0001703,4.44e-11,1;UBERON:0002241,4.44e-11,1;UBERON:0004761,4.44e-11,1;UBERON:0009617,4.44e-11,1;UBERON:0000025,8.19e-11,192;UBERON:0004111,3.74e-08,240;UBERON:0002037,1.98e-07,6;UBERON:0006215,1.98e-07,6 | |||
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|short_description=p10@PRKCB | |||
}} |
Revision as of 02:47, 12 January 2014
Short description: | p10@PRKCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PRKCB_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -358bp_to_NM_002738, NM_212535, uc002dmd.2, uc002dme.2_5end |
EntrezGene: | PRKCB |
HGNC: | 9395 |
UniProt: | P05771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data