FFCP PHASE1:Hg19::chr15:81071703..81071719,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29213 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WUJ3,C9JCC4 | |||
|association_with_transcript=0bp_to_ENST00000356249,ENST00000394683,ENST00000394685,NM_018689,uc002bfw.1,uc010unn.1_5end | |||
|coexpression_cluster_id=C387 | |||
|description=CAGE_peak_1_at_KIAA1199_5end | |||
|id=chr15:81071703..81071719,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.16e-38!180;CL:0000057!3.02e-22!75;CL:0000680!3.75e-16!57;CL:0000056!3.75e-16!57;CL:0000355!3.75e-16!57;CL:0000187!2.85e-15!54;CL:0000192!5.87e-14!42;CL:0000514!5.87e-14!42;CL:0000183!8.54e-14!59;CL:0000393!1.02e-12!60;CL:0000211!1.02e-12!60;CL:0000359!8.22e-11!32;CL:0002620!1.48e-08!23;CL:0002334!7.80e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.07e-10;43!CL:0000359;1.22e-10;32!CL:0000057;3.64e-09;73!CL:0000187;6.05e-09;55!CL:0002620;1.71e-08;23!CL:0002334;4.69e-07;12!CL:0000393;8.18e-07;61!CL:0000211;8.18e-07;61!CL:0002494;9.18e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.48e-23,76;CL:0000680,4.35e-17,58;CL:0000056,4.35e-17,58;CL:0000355,4.35e-17,58;CL:0000187,3.62e-16,55;CL:0000192,8.55e-15,43;CL:0000514,8.55e-15,43;CL:0000393,1.10e-12,61;CL:0000211,1.10e-12,61;CL:0000359,3.33e-11,32;CL:0002620,1.63e-08,23;CL:0002334,4.65e-07,12;CL:0002494,9.36e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-10;43!CL:0000355;2.43e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.72e-27!365;UBERON:0000914!3.33e-17!83;UBERON:0002329!3.33e-17!83;UBERON:0003077!3.33e-17!83;UBERON:0003059!3.33e-17!83;UBERON:0007282!3.33e-17!83;UBERON:0009618!3.33e-17!83;UBERON:0007285!3.33e-17!83;UBERON:0004290!8.87e-16!70;UBERON:0001134!4.18e-15!61;UBERON:0002036!4.18e-15!61;UBERON:0003082!4.18e-15!61;UBERON:0000468!8.26e-15!659;UBERON:0002385!3.63e-14!63;UBERON:0001015!3.63e-14!63;UBERON:0000383!3.63e-14!63;UBERON:0000486!4.21e-14!82;UBERON:0000481!8.11e-14!347;UBERON:0000467!2.59e-13!625;UBERON:0000480!4.99e-13!626;UBERON:0000119!1.87e-12!312;UBERON:0000477!4.00e-12!286;UBERON:0000483!9.95e-12!309;UBERON:0003102!5.75e-11!95;UBERON:0002100!8.79e-11!216;UBERON:0005256!1.99e-10!143;UBERON:0000062!2.17e-10!511;UBERON:0004111!5.52e-10!241;UBERON:0000033!4.05e-09!123;UBERON:0002199!4.76e-09!45;UBERON:0002416!4.76e-09!45;UBERON:0000025!9.22e-09!194;UBERON:0002097!1.75e-08!40;UBERON:0000153!3.13e-08!129;UBERON:0007811!3.13e-08!129;UBERON:0004121!5.14e-08!169;UBERON:0000955!1.72e-07!69;UBERON:0006238!1.72e-07!69;UBERON:0001017!1.94e-07!82;UBERON:0002050!2.23e-07!605;UBERON:0005423!2.23e-07!605;UBERON:0000923!2.52e-07!604;UBERON:0005291!2.52e-07!604;UBERON:0006598!2.52e-07!604;UBERON:0002532!2.52e-07!604;UBERON:0000924!2.63e-07!173;UBERON:0006601!2.63e-07!173;UBERON:0000922!3.31e-07!612;UBERON:0004872!5.26e-07!84;UBERON:0002616!7.34e-07!59;UBERON:0005743!7.37e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.22e-17,73;UBERON:0003077,9.58e-17,72;UBERON:0007285,9.58e-17,72;UBERON:0002329,1.62e-16,71;UBERON:0003059,1.62e-16,71;UBERON:0007282,1.62e-16,71;UBERON:0004290,1.62e-16,71;UBERON:0009618,1.62e-16,71;UBERON:0001134,4.15e-16,62;UBERON:0002036,4.15e-16,62;UBERON:0003082,4.15e-16,62;UBERON:0000486,8.34e-15,83;UBERON:0002385,1.04e-14,64;UBERON:0001015,1.04e-14,64;UBERON:0000383,1.04e-14,64;UBERON:0007503,5.51e-13,78;UBERON:0000119,2.25e-12,309;UBERON:0005256,8.78e-12,122;UBERON:0000483,1.24e-11,306;UBERON:0004111,4.89e-10,240;UBERON:0003102,8.35e-10,99;UBERON:0010314,8.98e-10,132;UBERON:0000025,1.36e-08,192;UBERON:0011216,1.74e-08,223;UBERON:0002199,2.25e-08,46;UBERON:0002416,2.25e-08,46;UBERON:0000955,4.73e-08,68;UBERON:0006238,4.73e-08,68;UBERON:0002097,9.08e-08,41;UBERON:0002050,9.45e-08,564;UBERON:0000923,1.05e-07,560;UBERON:0010316,1.05e-07,560;UBERON:0005291,1.05e-07,560;UBERON:0006598,1.05e-07,560;UBERON:0010317,1.05e-07,560;UBERON:0002532,1.05e-07,560;UBERON:0002100,1.15e-07,199;UBERON:0001017,1.90e-07,81;UBERON:0000490,2.40e-07,148;UBERON:0003104,3.14e-07,160;UBERON:0009142,3.14e-07,160;UBERON:0004121,3.92e-07,171;UBERON:0000924,3.92e-07,171;UBERON:0006601,3.92e-07,171;UBERON:0004573,6.59e-07,33;UBERON:0004571,6.59e-07,33 | |||
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| |||
|short_description=p1@KIAA1199 | |||
}} |
Revision as of 00:51, 12 January 2014
Short description: | p1@KIAA1199 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA1199_5end |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | 0bp_to_ENST00000356249, ENST00000394683, ENST00000394685, NM_018689, uc002bfw.1, uc010unn.1_5end |
EntrezGene: | KIAA1199 |
HGNC: | 29213 |
UniProt: | Q8WUJ3C9JCC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.48e-23 | 76 |
muscle precursor cell | 4.35e-17 | 58 |
myoblast | 4.35e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.35e-17 | 58 |
muscle cell | 3.62e-16 | 55 |
smooth muscle cell | 8.55e-15 | 43 |
smooth muscle myoblast | 8.55e-15 | 43 |
electrically responsive cell | 1.10e-12 | 61 |
electrically active cell | 1.10e-12 | 61 |
vascular associated smooth muscle cell | 3.33e-11 | 32 |
skin fibroblast | 1.63e-08 | 23 |
preadipocyte | 4.65e-07 | 12 |
cardiocyte | 9.36e-07 | 16 |