FFCP PHASE1:Hg19::chr15:69591120..69591137,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_AK057971_5end | |||
|description=CAGE_peak_2_at_AK057971_5end | |||
|id=chr15:69591120..69591137,- | |||
|ontology_enrichment_celltype=CL:0002274!3.93e-12!5;CL:0000457!3.93e-12!5;CL:0002191!3.93e-12!5;CL:0000097!3.93e-12!5;CL:0000831!3.93e-12!5;CL:0002028!3.93e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.03e-16;5!CL:0002253;3.52e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.73e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.49e-18;10!UBERON:0007687;1.49e-18;10!UBERON:0003104;5.79e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;4.24e-14;6!DOID:3193;3.52e-11;2!DOID:962;3.52e-11;2!DOID:171;7.66e-09;10!DOID:1192;7.02e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.71e-14,6;DOID:3193,3.35e-11,2;DOID:962,3.35e-11,2;DOID:171,7.07e-09,10;DOID:1192,6.78e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002346!6.79e-14!90;UBERON:0000073!1.47e-11!94;UBERON:0001016!1.47e-11!94;UBERON:0003075!1.79e-11!86;UBERON:0007284!1.79e-11!86;UBERON:0007023!3.00e-10!115;UBERON:0005743!4.05e-10!86;UBERON:0001049!2.43e-09!57;UBERON:0005068!2.43e-09!57;UBERON:0006241!2.43e-09!57;UBERON:0007135!2.43e-09!57;UBERON:0001017!7.18e-09!82;UBERON:0003076!5.72e-08!15;UBERON:0003057!5.72e-08!15;UBERON:0000955!2.13e-07!69;UBERON:0006238!2.13e-07!69;UBERON:0000924!3.10e-07!173;UBERON:0006601!3.10e-07!173;UBERON:0000988!4.73e-07!3;UBERON:0002616!8.98e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.69e-21;1!UBERON:0006518;1.69e-21;1!UBERON:0008949;1.69e-21;1!UBERON:0000101;1.69e-21;1!UBERON:0002167;1.69e-21;1!UBERON:0000013;1.03e-16;5!UBERON:0002410;1.03e-16;5!UBERON:0003714;3.52e-11;2!UBERON:0000010;1.01e-09;8!UBERON:0002113;4.15e-08;24!UBERON:0011143;4.15e-08;24!UBERON:0000489;8.34e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.53e-21,1;UBERON:0006518,1.53e-21,1;UBERON:0008949,1.53e-21,1;UBERON:0000101,1.53e-21,1;UBERON:0002167,1.53e-21,1;UBERON:0000013,8.82e-17,5;UBERON:0002410,8.82e-17,5;UBERON:0003714,3.35e-11,2;UBERON:0000010,9.24e-10,8;UBERON:0002113,1.63e-07,26;UBERON:0003918,1.63e-07,26;UBERON:0011143,1.63e-07,26;UBERON:0005095,1.63e-07,26;UBERON:0007687,1.63e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12584087817795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0.621984346622316,1.15295962733569,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.689486746482929,0.583209226766509,0,0,0,0,0,0.295547618953547,0.438770794307945,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73110911793673,0,0.0884575645033392,0.611030144933625,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0.242998226632099,0,3.30983970656632,2.7800931711549,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0.39669780522807,0.171086837884329,0,1.60181118851542,0,4.55662960881915,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,1.72992536041486,0,0.169732529954025,0.212574920101683,0.743614585554013,1.67593475391973,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.460409414939944,0,0,0,0,0,0,0,1.43325506366115,0.571812353413251,0.158013611732727,0,0.347716544605159,0,0,0,0,0,0,0.340853619036631,0.846774100381858,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0.109265571963696,0.506794004045748,0,0,0.459474497674225,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p2@AK057971 | |||
}} |
Revision as of 00:18, 12 January 2014
Short description: | p2@AK057971 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK057971_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_AK057971_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.53e-21 | 1 |
right lung lobe | 1.53e-21 | 1 |
lower lobe of lung | 1.53e-21 | 1 |
lobe of lung | 1.53e-21 | 1 |
right lung | 1.53e-21 | 1 |
sympathetic nervous system | 8.82e-17 | 5 |
autonomic nervous system | 8.82e-17 | 5 |
neural tissue | 3.35e-11 | 2 |
peripheral nervous system | 9.24e-10 | 8 |
kidney | 1.63e-07 | 26 |
kidney mesenchyme | 1.63e-07 | 26 |
upper urinary tract | 1.63e-07 | 26 |
kidney rudiment | 1.63e-07 | 26 |
kidney field | 1.63e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.71e-14 | 6 |
peripheral nerve sheath neoplasm | 3.35e-11 | 2 |
neurofibroma | 3.35e-11 | 2 |
neuroectodermal tumor | 7.07e-09 | 10 |
peripheral nervous system neoplasm | 6.78e-08 | 3 |