FFCP PHASE1:Hg19::chr15:68655697..68655711,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1747 | |||
|description=CAGE_peak_at_chr15:68655697..68655711,- | |||
|id=chr15:68655697..68655711,- | |||
|ontology_enrichment_celltype=CL:0000057!2.05e-15!75;CL:0000055!2.62e-13!180;CL:0002620!9.22e-12!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.76e-19;23!CL:0000138;2.03e-11;6!CL:0000153;1.26e-10;9!CL:0000447;1.26e-10;9!CL:0002580;6.39e-10;3!CL:0002615;1.29e-09;3!CL:0002579;1.40e-09;3!CL:0002334;1.72e-08;12!CL:0000327;3.27e-08;15!CL:0000197;7.09e-08;6!CL:0000098;7.09e-08;6!CL:0002167;7.09e-08;6!CL:0000136;1.59e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.74e-19,23;CL:0000057,8.72e-18,76;CL:0000058,1.24e-11,6;CL:0000138,1.24e-11,6;CL:0000136,3.99e-11,15;CL:0000153,8.10e-11,9;CL:0000447,8.10e-11,9;CL:0002580,5.62e-10,3;CL:0002615,9.26e-10,3;CL:0002579,2.02e-09,3;CL:0000134,4.01e-09,354;CL:0002320,1.03e-08,361;CL:0002334,1.92e-08,12;CL:0000327,2.24e-08,15;CL:0000197,4.75e-08,6;CL:0000098,4.75e-08,6;CL:0002167,4.75e-08,6;CL:0000219,2.75e-07,386;CL:0000048,4.83e-07,427;CL:0000723,8.94e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.12e-07!5;DOID:450!5.12e-07!5;DOID:66!5.12e-07!5;DOID:423!5.12e-07!5;DOID:0080000!5.12e-07!5;DOID:11722!5.12e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.85e-15;5!DOID:450;3.85e-15;5!DOID:66;3.85e-15;5!DOID:423;3.85e-15;5!DOID:0080000;3.85e-15;5!DOID:11722;3.85e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.61e-15,5;DOID:450,4.61e-15,5;DOID:66,4.61e-15,5;DOID:423,4.61e-15,5;DOID:0080000,4.61e-15,5;DOID:11722,4.61e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.39e-08!6;UBERON:0002358!5.39e-08!6;UBERON:0003684!5.39e-08!6;UBERON:0001178!5.39e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.73e-17;6!UBERON:0002358;1.73e-17;6!UBERON:0003684;1.73e-17;6!UBERON:0001178;1.73e-17;6!UBERON:0004457;2.62e-15;9!UBERON:0000042;2.62e-15;9!UBERON:0002097;1.16e-07;41!UBERON:0000310;3.34e-07;10!UBERON:0002384;5.70e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.80e-17,6;UBERON:0002358,1.80e-17,6;UBERON:0003684,1.80e-17,6;UBERON:0001178,1.80e-17,6;UBERON:0004457,3.32e-11,12;UBERON:0000042,3.32e-11,12;UBERON:0002097,1.64e-09,41;UBERON:0002384,2.41e-09,371;UBERON:0002199,3.80e-08,46;UBERON:0002416,3.80e-08,46;UBERON:0000310,3.33e-07,10 | |||
|phase1_expression=1.2717486548939,3.42560838225573,1.83240725324762,9.00659685178174,5.81049422755474,3.48935409640147,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0.502170558379211,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.50401373190767,2.75208386025565,1.5905718941022,6.32625331393427,0,0,0.087834785693126,0.72038491523742,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,2.51577443545116,7.74458876021797,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0.352303495931295,0.485618833104395,0,0,0.122834317311768,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,1.22595118319608,0.300476117813194,0,8.61070251306537,3.84403299873421,2.11931901159562,6.90209520994125,2.06105058476878,18.5501188832853,2.97786970130544,6.24472429292685,5.55390929418832,9.59248342127635,2.48534726334208,0.323292113637624,15.2654124782144,2.41805035746337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,1.4377491329495,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,3.11956292296211,3.56857977594324,2.83864347061082,1.99140405487612,0.601892199455438,0,0,0.664225598535437,0,0,0,0.686286847621712,0,0,0,0,0,0,2.72918588600655,24.55391572609,4.77122160536225,1.02511319404561,7.67560873600055,5.62988724002626,0,0.308419387605311,0.355123450626254,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.290012154876366,0,0,0.275673144969061,0,0,0.0852266274161009,1.24644849905432,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,1.69686518344455,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,2.53329162357197,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00177834520615,0,0,4.18420775327246,0,0,0.920418142519393,0,0.622079175323615,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0,0,0,0,0,0,0,0,1.46205491157214,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,1.45329133145522,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.685209623233754,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.248505071130865,0.235694034616795,0.271808412147228,0.209205692624666,0.815985741090574,0.288950589901519,0,0,0,1.28929632425987,0,0.837847203816763,4.81236890424536,0,0,0,0,0.134366944973453,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0.339936274560377,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0.221858103073705,0.124192805882767,0,0,0,0,0.470531639396343,0,0,0,3.03827302801392,1.10961172300523,0.378806010550178,1.0062716070103,0,0.228840068396924,0.302461847526478,0,0.295710299979268,0.159296767163702,0,0,0.414706207840855,1.59505028734797,2.08698024724694,0.601030435988874,0,0,1.45478927362048,1.39633724155235,0,1.19428766609585,0.800055529326307,2.06037423109676,2.02049693259551,0,0,0,0.260994291965212,0.453411851024545,0.231522474323834,0,0.537266523244462,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0.414775308455192,0.194860308839388,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0.368211900503681,0,0,0,0.970423302570136,0,0,0,0.425149840203366,0.123935764259002,0,0.954013051960256,0,0,1.05802783107205,0.6124909547064,0.0642292250964595,1.41696576325585,1.43670473151436,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,3.05105676373734,0.690359926060101,0,0.225630985047772,1.0085253435176,0,0,0.163771917510097,0,0.0675375846183947,0,1.44680757550829,0.126831620387814,0,0,0.992422356778588,0.175871244359621,0,0,0.336283722218824,0,0.455324382702595,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0.980593287015622,0,0.196308467114945,0,0,2.37897960562944,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,1.85997509083376,2.31087814315709,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0,0,0.310298987585686,0,0,0,0,0.560659312903067,0,0.202117188958219,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,2.34640942403454,4.03396765803459,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr15:68655697..68655711,- | |||
}} |
Revision as of 00:15, 12 January 2014
Short description: | p@chr15:68655697..68655711, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68655697..68655711, - |
Coexpression cluster: | C1747_Preadipocyte_Fibroblast_Adipocyte_Chondrocyte_heart_Multipotent_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.74e-19 | 23 |
fibroblast | 8.72e-18 | 76 |
chondroblast | 1.24e-11 | 6 |
chondrocyte | 1.24e-11 | 6 |
fat cell | 3.99e-11 | 15 |
GAG secreting cell | 8.10e-11 | 9 |
carbohydrate secreting cell | 8.10e-11 | 9 |
preadipocyte of the breast | 5.62e-10 | 3 |
adipocyte of omentum tissue | 9.26e-10 | 3 |
omentum preadipocyte | 2.02e-09 | 3 |
mesenchymal cell | 4.01e-09 | 354 |
connective tissue cell | 1.03e-08 | 361 |
preadipocyte | 1.92e-08 | 12 |
extracellular matrix secreting cell | 2.24e-08 | 15 |
receptor cell | 4.75e-08 | 6 |
sensory epithelial cell | 4.75e-08 | 6 |
olfactory epithelial cell | 4.75e-08 | 6 |
motile cell | 2.75e-07 | 386 |
multi fate stem cell | 4.83e-07 | 427 |
somatic stem cell | 8.94e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.80e-17 | 6 |
peritoneum | 1.80e-17 | 6 |
abdominal cavity | 1.80e-17 | 6 |
visceral peritoneum | 1.80e-17 | 6 |
cavity lining | 3.32e-11 | 12 |
serous membrane | 3.32e-11 | 12 |
skin of body | 1.64e-09 | 41 |
connective tissue | 2.41e-09 | 371 |
integument | 3.80e-08 | 46 |
integumental system | 3.80e-08 | 46 |
breast | 3.33e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.61e-15 | 5 |
myotonic disease | 4.61e-15 | 5 |
muscle tissue disease | 4.61e-15 | 5 |
myopathy | 4.61e-15 | 5 |
muscular disease | 4.61e-15 | 5 |
myotonic dystrophy | 4.61e-15 | 5 |