FFCP PHASE1:Hg19::chr14:75079205..75079223,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |||
|TSSclassifier=strong | |||
|UniProt=G3V254 | |||
|association_with_transcript=82bp_to_ENST00000556359_5end | |||
|coexpression_cluster_id=C758 | |||
|description=CAGE_peak_7_at_LTBP2_5end | |||
|id=chr14:75079205..75079223,- | |||
|ontology_enrichment_celltype=CL:0000222!1.10e-19!119;CL:0000055!1.11e-19!180;CL:0000220!4.40e-17!246;CL:0002321!1.63e-16!248;CL:0002371!9.95e-15!591;CL:0000057!3.22e-14!75;CL:0000144!2.66e-13!625;CL:0000183!7.84e-13!59;CL:0000115!8.45e-13!35;CL:0000359!1.23e-12!32;CL:0002139!1.91e-12!24;CL:0000680!1.56e-11!57;CL:0000056!1.56e-11!57;CL:0000355!1.56e-11!57;CL:0000192!3.31e-11!42;CL:0000514!3.31e-11!42;CL:0000187!1.50e-10!54;CL:0002078!3.22e-10!44;CL:0000071!4.62e-10!18;CL:0002546!4.62e-10!18;CL:0000213!1.43e-09!57;CL:0000215!1.43e-09!57;CL:0000548!5.48e-09!679;CL:0000004!5.48e-09!679;CL:0000255!5.48e-09!679;CL:0000012!1.64e-08!682;CL:0000393!3.32e-08!60;CL:0000211!3.32e-08!60;CL:1000413!1.27e-07!9;CL:0002334!1.92e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.13e-14;24!CL:0000115;3.09e-13;36!CL:0000071;5.68e-12;18!CL:0000359;2.76e-11;32!CL:1000413;1.39e-09;9!CL:0002334;2.48e-09;12!CL:0002078;2.56e-07;45!CL:0000192;6.00e-07;43!CL:0002544;6.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.07e-15,121;CL:0000115,3.36e-14,36;CL:0002139,4.36e-14,24;CL:0002321,5.32e-14,250;CL:0000057,2.18e-13,76;CL:0000071,5.81e-12,18;CL:0002546,5.81e-12,18;CL:0000359,1.08e-11,32;CL:0002078,3.28e-11,45;CL:1000413,1.54e-09,9;CL:0002334,2.64e-09,12;CL:0000192,1.56e-08,43;CL:0000514,1.56e-08,43;CL:0000213,4.62e-08,58;CL:0000215,4.62e-08,58;CL:0000680,9.55e-08,58;CL:0000056,9.55e-08,58;CL:0000355,9.55e-08,58;CL:0002544,7.21e-07,6;CL:0000187,9.94e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;5.68e-12;18!CL:0000514;6.00e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!2.57e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.23e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.00e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.67e-30!79;UBERON:0007798!2.67e-30!79;UBERON:0000055!4.43e-26!69;UBERON:0001981!4.79e-25!60;UBERON:0007500!4.79e-25!60;UBERON:0004537!4.79e-25!60;UBERON:0006965!4.79e-25!60;UBERON:0004872!1.91e-22!84;UBERON:0004535!1.07e-21!110;UBERON:0001009!1.74e-21!113;UBERON:0001637!1.92e-20!42;UBERON:0003509!1.92e-20!42;UBERON:0004572!1.92e-20!42;UBERON:0003914!5.44e-19!118;UBERON:0004573!1.43e-15!33;UBERON:0004571!1.43e-15!33;UBERON:0000119!1.48e-14!312;UBERON:0000483!4.45e-14!309;UBERON:0000914!7.35e-14!83;UBERON:0002329!7.35e-14!83;UBERON:0003077!7.35e-14!83;UBERON:0003059!7.35e-14!83;UBERON:0007282!7.35e-14!83;UBERON:0009618!7.35e-14!83;UBERON:0007285!7.35e-14!83;UBERON:0000486!7.75e-14!82;UBERON:0000490!7.62e-12!138;UBERON:0000947!2.51e-11!21;UBERON:0010191!2.51e-11!21;UBERON:0000475!3.55e-11!365;UBERON:0000468!6.18e-11!659;UBERON:0005256!6.76e-11!143;UBERON:0004290!8.87e-11!70;UBERON:0000467!1.30e-10!625;UBERON:0000477!1.45e-10!286;UBERON:0000480!1.92e-10!626;UBERON:0003102!3.49e-10!95;UBERON:0001134!3.68e-10!61;UBERON:0002036!3.68e-10!61;UBERON:0003082!3.68e-10!61;UBERON:0002100!3.82e-10!216;UBERON:0002385!4.30e-10!63;UBERON:0001015!4.30e-10!63;UBERON:0000383!4.30e-10!63;UBERON:0001986!4.62e-10!18;UBERON:0004638!4.62e-10!18;UBERON:0004852!4.62e-10!18;UBERON:0004111!1.22e-09!241;UBERON:0001444!9.17e-08!48;UBERON:0003915!1.27e-07!9;UBERON:0004700!1.27e-07!9;UBERON:0001917!1.27e-07!9;UBERON:0000487!1.78e-07!22;UBERON:0006914!2.88e-07!25;UBERON:0005085!5.14e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.97e-19;42!UBERON:0003509;9.97e-19;42!UBERON:0004572;9.97e-19;42!UBERON:0004573;2.64e-17;33!UBERON:0004571;2.64e-17;33!UBERON:0007500;4.73e-14;56!UBERON:0001981;4.73e-14;56!UBERON:0004537;4.73e-14;56!UBERON:0000947;1.28e-13;21!UBERON:0010191;1.28e-13;21!UBERON:0000055;5.11e-13;65!UBERON:0002049;1.83e-12;75!UBERON:0007798;1.83e-12;75!UBERON:0004638;5.68e-12;18!UBERON:0001986;5.68e-12;18!UBERON:0004852;5.68e-12;18!UBERON:0003914;1.37e-11;74!UBERON:0003915;1.39e-09;9!UBERON:0004700;1.39e-09;9!UBERON:0001917;1.39e-09;9!UBERON:0000487;1.07e-08;22!UBERON:0010371;1.94e-08;31!UBERON:0006914;5.44e-08;25!UBERON:0000490;8.76e-08;33!UBERON:0004535;1.84e-07;109!UBERON:0000025;2.16e-07;93!UBERON:0000483;4.09e-07;136!UBERON:0001009;8.72e-07;112!UBERON:0000119;9.15e-07;139 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.47e-30,78;UBERON:0007798,1.47e-30,78;UBERON:0000055,2.58e-27,68;UBERON:0007500,4.07e-26,59;UBERON:0001981,4.07e-26,59;UBERON:0004537,4.07e-26,59;UBERON:0006965,4.07e-26,59;UBERON:0001637,1.41e-24,42;UBERON:0003509,1.41e-24,42;UBERON:0004572,1.41e-24,42;UBERON:0004535,5.69e-23,109;UBERON:0001009,2.36e-22,112;UBERON:0004872,2.83e-22,83;UBERON:0003914,2.06e-18,117;UBERON:0004573,3.17e-18,33;UBERON:0004571,3.17e-18,33;UBERON:0000947,1.41e-13,21;UBERON:0010191,1.41e-13,21;UBERON:0004638,5.81e-12,18;UBERON:0001986,5.81e-12,18;UBERON:0004852,5.81e-12,18;UBERON:0003915,1.54e-09,9;UBERON:0004700,1.54e-09,9;UBERON:0001917,1.54e-09,9;UBERON:0000486,1.02e-08,83;UBERON:0000487,1.09e-08,22;UBERON:0000119,1.71e-08,309;UBERON:0000483,2.91e-08,306;UBERON:0007503,3.63e-08,78;UBERON:0006914,5.67e-08,25;UBERON:0000033,1.05e-07,56;UBERON:0004111,1.52e-07,240;UBERON:0003102,1.53e-07,99;UBERON:0000490,6.14e-07,148 | |||
|phase1_expression=1.81678379270557,3.21150785836475,1.12763523276777,1.0007329835313,0.893922188854576,0,0,4.42203911398782,0,0.737201809504527,0,11.5773927228991,22.683960127647,0.37129905888014,2.31978163009541,8.0679017574213,6.62963980826375,5.11217063271161,7.3189919818576,2.95490539384291,4.89601658986207,0.313454721478088,0.572471974262113,1.09499540058307,0.502170558379211,0,0,0,0,0,0,1.83884244895785,3.614471025339,1.47901604066715,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,4.51204119572301,2.75208386025565,4.7717156823066,14.1124112387764,3.59232305223458,8.42571710357743,5.18225235589444,0.72038491523742,2.18577172975525,0.741568885568859,0,0,0,0,0,0,6.16163462836786,9.46258054616737,17.7041655819873,9.61023501270816,8.38998872419812,10.7296036356626,8.56879362800923,8.52775305258785,9.24992282985447,7.69857409358742,1.20848795132744,0,0.976248230192678,5.14728312484216,23.494116488571,4.73288559905623,7.85852804191594,4.72968218029953,15.3316637465883,6.6448596169769,7.87767498900751,0,0,3.05265836499774,7.45457927542978,3.54565432660823,1.45650098894541,13.7681577959431,1.77334191099179,0.560677600142307,12.8098794875646,3.94668077467456,0,2.2900814251847,1.14423332179421,3.02714855289863,2.88087962239999,1.40592859100278,0.624320153660641,0.570471821544449,0.448346041655403,0.23486899728753,0.485618833104395,0,0.61246251376468,1.59684612505298,1.85986406116378,9.50402285825643,8.65434252474949,0,1.43723628363248,0.505008341862199,0.500474079487857,1.10825646193673,1.31693286264251,3.0648779579902,5.85928429735728,1.24775401476023,3.58779271377724,2.56268866582281,0.423863802319124,3.90118424909723,1.95799805553034,4.89517026086695,1.8611685633159,5.56961896396179,2.53336213419116,3.5340728394176,2.48534726334208,4.84938170456436,5.32514388774922,1.0075209822764,0.508681776931463,23.7710849390855,2.18196896472668,15.4874481510062,0,0,0,0,0,0,1.56449532329816,8.36213219650751,1.38134921352481,7.42988684851167,0,0,0,0,0,0,0,0,0,0,2.21446636387394,4.20725321410337,0,1.47008711385542,0,0,0,0,0.122988438543114,3.43135620597051,4.60951198716227,2.24803506515239,2.21163739305588,3.88871469665824,0.325808305310325,0,2.88662684050547,0.579652024875384,11.2712346466389,2.30986316417718,1.38895653772983,0.951270761172991,0,0,0.246217006087397,0,0.148631162288728,7.49870671894216,6.55130299975552,11.9091081683605,1.43293636324557,2.3250715081117,3.06706143332169,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,1.90622843387113,0.43596006883328,1.24675085895615,8.91974838728667,0,1.690605505112,2.39344304926383,1.04007436911366,0.514414748524284,1.41849132023278,1.5985330740966,0,0.542621605391443,0.823240336780769,0.65147236858747,0,0,1.20575750823834,0.871533458600294,1.29964888536674,0,0,0,0,0,2.85273810081437,3.04040744001916,2.67119219315498,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,3.50119364741774,1.35632511849868,0.623912584592421,1.60586089917446,0.788512075169673,1.52283839490527,1.80567659836631,2.27407504055985,3.10419213877515,2.65690239414175,1.47495334833363,0.695068915744663,15.076689124631,4.46086450954113,0,0,0,0,0,1.5119514666484,4.71404834855676,8.74733247741956,6.45518217196069,3.58789617915963,3.07024349440022,2.41280881715411,1.48418066444991,6.01417805830357,9.05564799096948,5.17401082886998,10.904343012856,4.18357362455853,0.120859449591622,18.0455823272956,0.0920809889358963,0.114814448164607,0.182091168006717,0,0.451199612907412,1.15523005656622,0.784349769176855,4.38417673959782,3.79985864014353,4.54933536283586,6.63365450578411,4.10240240594065,6.16909010761157,2.43851793789468,6.52196706011309,0,0,4.25362033972139,0,0,0.256450125116389,1.31205858279882,1.30151357865721,0.618246069886334,0,0,3.44559322797703,12.3511446746939,0,2.12675580242668,0.154048617114644,0.460511024178389,0.551346289938122,0.859361958946189,0,0.511359764496605,6.94449878044551,8.09896085268793,18.6424365344153,9.57095343709381,4.75441570021085,0.464845549297286,7.24068397710472,2.0911118104818,1.23213432070436,3.19383618190213,5.21959795245044,6.30102344953328,0.858749320451947,0.372158369359667,2.53103539774981,0.38126038784765,1.27948895655667,0.42793898803392,4.13664222303718,3.92474320099615,0.359744915166629,0.274537029736055,0.117812402345686,1.81964233415984,1.58510321173008,4.21258456238981,0.48763373908959,2.43713489631284,1.05650146756755,1.63799893689583,0.141405431953713,4.52032466480971,2.75682671773062,7.29782872765342,5.69986150829892,0,0,7.10186319369464,4.64735247149625,7.04239006330604,0.860468113224309,0.88424136911809,4.9933947207375,2.12856638442359,0.844430541190656,3.29294892959902,2.65631221636001,0.349934720244983,1.63577591633371,6.70302275535787,4.3556393944529,0.188287601553558,17.2202149068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| |||
|short_description=p7@LTBP2 | |||
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Revision as of 21:02, 11 January 2014
Short description: | p7@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 82bp_to_ENST00000556359_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | G3V254 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.07e-15 | 121 |
endothelial cell | 3.36e-14 | 36 |
endothelial cell of vascular tree | 4.36e-14 | 24 |
embryonic cell | 5.32e-14 | 250 |
fibroblast | 2.18e-13 | 76 |
blood vessel endothelial cell | 5.81e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.81e-12 | 18 |
vascular associated smooth muscle cell | 1.08e-11 | 32 |
meso-epithelial cell | 3.28e-11 | 45 |
endothelial cell of artery | 1.54e-09 | 9 |
preadipocyte | 2.64e-09 | 12 |
smooth muscle cell | 1.56e-08 | 43 |
smooth muscle myoblast | 1.56e-08 | 43 |
lining cell | 4.62e-08 | 58 |
barrier cell | 4.62e-08 | 58 |
muscle precursor cell | 9.55e-08 | 58 |
myoblast | 9.55e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.55e-08 | 58 |
aortic endothelial cell | 7.21e-07 | 6 |
muscle cell | 9.94e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.47e-30 | 78 |
vascular system | 1.47e-30 | 78 |
vessel | 2.58e-27 | 68 |
epithelial tube open at both ends | 4.07e-26 | 59 |
blood vessel | 4.07e-26 | 59 |
blood vasculature | 4.07e-26 | 59 |
vascular cord | 4.07e-26 | 59 |
artery | 1.41e-24 | 42 |
arterial blood vessel | 1.41e-24 | 42 |
arterial system | 1.41e-24 | 42 |
cardiovascular system | 5.69e-23 | 109 |
circulatory system | 2.36e-22 | 112 |
splanchnic layer of lateral plate mesoderm | 2.83e-22 | 83 |
epithelial tube | 2.06e-18 | 117 |
systemic artery | 3.17e-18 | 33 |
systemic arterial system | 3.17e-18 | 33 |
aorta | 1.41e-13 | 21 |
aortic system | 1.41e-13 | 21 |
blood vessel endothelium | 5.81e-12 | 18 |
endothelium | 5.81e-12 | 18 |
cardiovascular system endothelium | 5.81e-12 | 18 |
endothelial tube | 1.54e-09 | 9 |
arterial system endothelium | 1.54e-09 | 9 |
endothelium of artery | 1.54e-09 | 9 |
multilaminar epithelium | 1.02e-08 | 83 |
simple squamous epithelium | 1.09e-08 | 22 |
cell layer | 1.71e-08 | 309 |
epithelium | 2.91e-08 | 306 |
epithelial vesicle | 3.63e-08 | 78 |
squamous epithelium | 5.67e-08 | 25 |
head | 1.05e-07 | 56 |
anatomical conduit | 1.52e-07 | 240 |
surface structure | 1.53e-07 | 99 |
unilaminar epithelium | 6.14e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.00e-09 | 14 |