FFCP PHASE1:Hg19::chr14:61748188..61748205,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161291 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27254 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000557163,uc010apr.1_5end | |||
|coexpression_cluster_id=C2305 | |||
|description=CAGE_peak_6_at_TMEM30B_5end | |||
|id=chr14:61748188..61748205,- | |||
|ontology_enrichment_celltype=CL:0000066!4.17e-18!254;CL:0002076!1.76e-14!43;CL:0000223!1.44e-10!59;CL:0002251!7.43e-09!21;CL:0002159!9.04e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.70e-09;5!CL:0002251;1.45e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.12e-09,5;CL:0000066,1.98e-08,253;CL:0002251,1.68e-07,20;CL:0002076,9.79e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0006595;8.78e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.08e-12!106;DOID:1749!3.81e-11!14;DOID:0050687!8.83e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.48e-09;4!DOID:1612;1.48e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.15e-09,4;DOID:1612,1.15e-09,4;DOID:305,1.49e-09,106;DOID:0050687,1.25e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.35e-17!169;UBERON:0000925!8.35e-17!169;UBERON:0006595!8.35e-17!169;UBERON:0001007!2.66e-13!155;UBERON:0001555!2.66e-13!155;UBERON:0007026!2.66e-13!155;UBERON:0004921!7.67e-11!129;UBERON:0004185!7.67e-11!129;UBERON:0001004!2.42e-10!72;UBERON:0000077!6.91e-10!130;UBERON:0000464!1.05e-09!104;UBERON:0005911!1.11e-09!82;UBERON:0000466!1.25e-09!126;UBERON:0005631!2.33e-09!14;UBERON:0000158!2.33e-09!14;UBERON:0000161!2.40e-09!35;UBERON:0005153!1.71e-08!37;UBERON:0005156!3.44e-08!59;UBERON:0000990!3.44e-08!59;UBERON:0000166!9.71e-08!21;UBERON:0002530!1.07e-07!59;UBERON:0003124!1.57e-07!7;UBERON:0004175!2.78e-07!25;UBERON:0000344!6.71e-07!12;UBERON:0003133!9.26e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;2.90e-08;6!UBERON:0004921;5.04e-08;33!UBERON:0006947;7.38e-08;3!UBERON:0004054;7.38e-08;3!UBERON:0000058;1.78e-07;10!UBERON:0000161;3.44e-07;19!UBERON:0000166;3.44e-07;19!UBERON:0002108;7.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.79e-12,160;UBERON:0000925,3.79e-12,160;UBERON:0006595,3.79e-12,160;UBERON:0001007,2.74e-10,145;UBERON:0001555,2.74e-10,145;UBERON:0007026,2.74e-10,145;UBERON:0005631,3.08e-10,14;UBERON:0000158,3.08e-10,14;UBERON:0004921,7.95e-08,118;UBERON:0006947,8.67e-08,3;UBERON:0004054,8.67e-08,3;UBERON:0003124,1.57e-07,7;UBERON:0002108,7.73e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,1.52908960491121,1.84636884759917,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.205601498999509,0,0.651844533267181,0.946895611469467,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0.535081656179426,1.04535523804977,0,0.383220493601921,0,0,0.318565414324097,1.30216690771284,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.654895377488563,3.27865759463288,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,2.18196896472668,0.860413786167011,2.80539524098069,1.98794652482228,1.97529702878181,1.14027160516907,2.01856680700503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,3.07471096357784,0,1.09750285408626,0,0.603173834469785,1.85176890317059,0,0,0,0,0,0,0,0,3.1608175918371,3.43394464837949,0,0,0,0.93733833986777,0.839910640994298,0.567100388969546,0.985143749731331,0.871901815541886,0.766765358330422,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0.606255142892519,3.32870879020994,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.802025881213139,1.38121483403844,0,0,0,0.902399225814824,1.38627606787947,0,0,0.316654886678627,0,0,0,0,0.541892875087706,0,2.29388645740534,1.66215201785745,0.223874754722178,0,0,0,0,0.325378394664303,2.98818933778395,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0,0,0.495854746082934,0.384380134730212,0.510450849978337,2.2254711788221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.48111056362756,0.670302275535787,0,2.35359501941948,0,0,1.33029046061003,0.459446800413919,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,2.62618933211459,0.890894042497916,1.53580351049616,0,0,0,0,0.422250816255987,0.996239941255349,0,3.27512572210559,0,0,0,0.988551862620595,2.86433879480975,0,0.493217028184668,0,0,0,0,0,3.9064164162785,3.41093999985163,0,1.0241410345695,4.06805840468426,1.65471377237555,0,0,0,0.885741385813839,0,0,0,0,0,0,0.557694977114413,0.846452843541768,0,2.99733075704478,0,3.04212641381623,2.87101043758728,0.732780747214898,3.19820865611181,0,0,0,0,0,0,0,0,0,1.63232808159148,0.848118428603645,0,0.995261931078505,1.76915129006678,1.22206028986725,0,0,0,0,0,0,0,3.32629852184552,0,5.91876604274086,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,2.08271686002157,1.7638631534588,0.957651272384428,3.14508002835654,1.0319161948297,0,0,0,0.484945082442097,0,0.677942222341597,0,0,0,0.977756913674015,0.160317640503067,2.77488893161158,0,1.29681375438695,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,2.39614800598789,0,0,0,0,0,0,0,0,0,0,0,0,2.41129722697529,3.57602535152808,3.32352270423348,0,0,0,0,1.73372556058236,2.04572893726493,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,2.78449243988357,1.32506888912221,0,0,0,0,0.533937062838473,0.943225830597996,0.414239055347196,0.496166021811951,0,0,0.638341257770182,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0.192687675289379,0,0,0,0,0,0,0,0.687034029507179,1.65157612686837,2.20114318226015,1.15525666150338,0,0,0,0.676892955143315,0,4.68908406739856,0,0,1.33070477595341,0,0,0.206686796501184,0.0634158101939068,0,10.9651553371436,0,0,1.53314913167514,0,0.336283722218824,9.10448406354947,8.65116327134931,3.37069006618028,0,0,0,0,0.827356886187777,2.00216523405724,2.98273752831953,0.314231179832004,1.96190514319652,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0.691259661814092,9.03477453522583,0,0,8.04435395362765,1.8328549483524,0,0,2.01339777236026,1.66855397145913,0.853425474875886,0,0,0,0,1.63757624423474,0.198950775161368,0,1.01651473835064,0,3.47214540203349,3.6271854310734,2.62271472604749,0.940634592723046,0,3.06379511232114,0,0,0,0,0,0,0,0.535661815816973,1.05868461514708,2.72820646743172,0,11.9269613685181,0,0,0,0,2.1161073620616,0,0,0,0,0,0,3.26364255174342,0.801652215796681,1.28652859348783,0.752122617877125,0.530450887527676,0,0,0,2.13233981900981,3.57096647195611,0.452122368852043,0.248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| |||
|short_description=p6@TMEM30B | |||
}} |
Revision as of 20:25, 11 January 2014
Short description: | p6@TMEM30B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMEM30B_5end |
Coexpression cluster: | C2305_thyroid_pituitary_small_parotid_choriocarcinoma_salivary_bile |
Association with transcript: | 0bp_to_ENST00000557163, uc010apr.1_5end |
EntrezGene: | TMEM30B |
HGNC: | 27254 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.12e-09 | 5 |
epithelial cell | 1.98e-08 | 253 |
epithelial cell of alimentary canal | 1.68e-07 | 20 |
endo-epithelial cell | 9.79e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.79e-12 | 160 |
endoderm | 3.79e-12 | 160 |
presumptive endoderm | 3.79e-12 | 160 |
digestive system | 2.74e-10 | 145 |
digestive tract | 2.74e-10 | 145 |
primitive gut | 2.74e-10 | 145 |
extraembryonic membrane | 3.08e-10 | 14 |
membranous layer | 3.08e-10 | 14 |
subdivision of digestive tract | 7.95e-08 | 118 |
male genital duct | 8.67e-08 | 3 |
internal male genitalia | 8.67e-08 | 3 |
chorion | 1.57e-07 | 7 |
small intestine | 7.73e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.15e-09 | 4 |
breast cancer | 1.15e-09 | 4 |
carcinoma | 1.49e-09 | 106 |
cell type cancer | 1.25e-07 | 143 |