FFCP PHASE1:Hg19::chr14:61654271..61654282,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |||
|TSSclassifier=strong | |||
|UniProt=G3V4L3 | |||
|association_with_transcript=0bp_to_ENST00000555185_5end | |||
|description=CAGE_peak_30_at_PRKCH_5end | |||
|id=chr14:61654271..61654282,+ | |||
|ontology_enrichment_celltype=CL:0000064!3.24e-09!3;CL:0005012!3.24e-09!3;CL:0000067!3.24e-09!3;CL:0002304!3.24e-09!3;CL:0000708!5.04e-09!3;CL:0002590!1.87e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.99e-55;3!CL:0000067;4.99e-55;3!CL:0005012;4.99e-55;3!CL:0002304;4.99e-55;3!CL:0002549;9.82e-37;2!CL:0000708;7.01e-25;3!CL:0000075;3.93e-11;27!CL:0000710;7.45e-09;20!CL:0002590;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.40e-55,3;CL:0000067,2.40e-55,3;CL:0005012,2.40e-55,3;CL:0002304,2.40e-55,3;CL:0002549,2.04e-36,2;CL:0000708,4.87e-25,3;CL:0000075,3.93e-11,27;CL:0000710,6.70e-09,20;CL:0002590,2.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!1.65e-18!11;UBERON:0006876!1.65e-18!11;UBERON:0005284!2.58e-13!5;UBERON:0000488!1.68e-11!4;UBERON:0003056!4.99e-11!61;UBERON:0007625!5.33e-11!11;UBERON:0000153!1.13e-10!129;UBERON:0007811!1.13e-10!129;UBERON:0000033!9.10e-10!123;UBERON:0001778!3.24e-09!3;UBERON:0001775!3.24e-09!3;UBERON:0003075!5.03e-09!86;UBERON:0007284!5.03e-09!86;UBERON:0003210!5.04e-09!3;UBERON:0002616!6.25e-09!59;UBERON:0002346!2.24e-08!90;UBERON:0005743!7.77e-08!86;UBERON:0002203!1.30e-07!6;UBERON:0001768!1.30e-07!6;UBERON:0000019!2.35e-07!19;UBERON:0000047!2.35e-07!19;UBERON:0004088!2.35e-07!19;UBERON:0003072!2.35e-07!19;UBERON:0003071!2.35e-07!19;UBERON:0004128!2.35e-07!19;UBERON:0004121!5.97e-07!169;UBERON:0000970!6.52e-07!20;UBERON:0000955!7.14e-07!69;UBERON:0006238!7.14e-07!69;UBERON:0001950!8.19e-07!20;UBERON:0001017!9.63e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.05e-58;11!UBERON:0001778;4.99e-55;3!UBERON:0001775;4.99e-55;3!UBERON:0000488;1.67e-41;4!UBERON:0005629;9.82e-37;2!UBERON:0005358;9.82e-37;2!UBERON:0001886;9.82e-37;2!UBERON:0004086;9.82e-37;2!UBERON:0005282;9.82e-37;2!UBERON:0005281;9.82e-37;2!UBERON:0005284;7.43e-33;5!UBERON:0002203;5.90e-28;6!UBERON:0001768;5.90e-28;6!UBERON:0002200;5.90e-28;6!UBERON:0007625;9.86e-27;11!UBERON:0003210;7.01e-25;3!UBERON:0001801;4.15e-21;14!UBERON:0000019;1.15e-15;19!UBERON:0000047;1.15e-15;19!UBERON:0004088;1.15e-15;19!UBERON:0010230;1.15e-15;19!UBERON:0000970;6.66e-15;20!UBERON:0002104;3.27e-14;21!UBERON:0001456;3.27e-14;21!UBERON:0000020;5.23e-13;23!UBERON:0001032;1.76e-12;24!UBERON:0004456;1.76e-12;24!UBERON:0010371;1.18e-09;31!UBERON:0002049;5.43e-07;75!UBERON:0007798;5.43e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.29e-58,11;UBERON:0001778,2.40e-55,3;UBERON:0001775,2.40e-55,3;UBERON:0000488,9.63e-42,4;UBERON:0005629,2.04e-36,2;UBERON:0005358,2.04e-36,2;UBERON:0001886,2.04e-36,2;UBERON:0004086,2.04e-36,2;UBERON:0005282,2.04e-36,2;UBERON:0005281,2.04e-36,2;UBERON:0005284,1.43e-32,5;UBERON:0002203,4.10e-28,6;UBERON:0001768,4.10e-28,6;UBERON:0002200,4.10e-28,6;UBERON:0007625,9.88e-27,11;UBERON:0003210,4.87e-25,3;UBERON:0001801,4.15e-21,14;UBERON:0000019,6.66e-15,20;UBERON:0000047,6.66e-15,20;UBERON:0010312,6.66e-15,20;UBERON:0004088,6.66e-15,20;UBERON:0010230,6.66e-15,20;UBERON:0003072,6.66e-15,20;UBERON:0004128,6.66e-15,20;UBERON:0003071,6.66e-15,20;UBERON:0000970,3.27e-14,21;UBERON:0002104,3.27e-14,21;UBERON:0001456,1.39e-13,22;UBERON:0000020,1.76e-12,24;UBERON:0001032,1.76e-12,24;UBERON:0004456,1.76e-12,24;UBERON:0005085,9.77e-10,31;UBERON:0002049,3.29e-08,78;UBERON:0007798,3.29e-08,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17430079477356,1.77383517970051,2.63504357079378,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05950199351452,1.15235184896,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.231860809950154,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45770409648969,0.87192013766656,1.1734125731352,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0.157702415033935,0.468565659970853,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.728341138602278,0.789168805698781,0,0,0.252746318513952,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0.655745261419609,0,0,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.695433089210318,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0.129177819672012,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p30@PRKCH | |||
}} |
Revision as of 20:24, 11 January 2014
Short description: | p30@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_PRKCH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000555185_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | G3V4L3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.40e-55 | 3 |
ciliated epithelial cell | 2.40e-55 | 3 |
multi-ciliated epithelial cell | 2.40e-55 | 3 |
non-pigmented ciliary epithelial cell | 2.40e-55 | 3 |
fibroblast of choroid plexus | 2.04e-36 | 2 |
leptomeningeal cell | 4.87e-25 | 3 |
columnar/cuboidal epithelial cell | 3.93e-11 | 27 |
neurecto-epithelial cell | 6.70e-09 | 20 |
smooth muscle cell of the brain vasculature | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 1.29e-58 | 11 |
ciliary epithelium | 2.40e-55 | 3 |
ciliary body | 2.40e-55 | 3 |
atypical epithelium | 9.63e-42 | 4 |
vascular plexus | 2.04e-36 | 2 |
ventricle of nervous system | 2.04e-36 | 2 |
choroid plexus | 2.04e-36 | 2 |
brain ventricle | 2.04e-36 | 2 |
ventricular system of brain | 2.04e-36 | 2 |
ventricular system of central nervous system | 2.04e-36 | 2 |
brain vasculature | 1.43e-32 | 5 |
vasculature of eye | 4.10e-28 | 6 |
uvea | 4.10e-28 | 6 |
vasculature of head | 4.10e-28 | 6 |
pigment epithelium of eye | 9.88e-27 | 11 |
blood-cerebrospinal fluid barrier | 4.87e-25 | 3 |
anterior segment of eyeball | 4.15e-21 | 14 |
camera-type eye | 6.66e-15 | 20 |
simple eye | 6.66e-15 | 20 |
immature eye | 6.66e-15 | 20 |
ocular region | 6.66e-15 | 20 |
eyeball of camera-type eye | 6.66e-15 | 20 |
optic cup | 6.66e-15 | 20 |
optic vesicle | 6.66e-15 | 20 |
eye primordium | 6.66e-15 | 20 |
eye | 3.27e-14 | 21 |
visual system | 3.27e-14 | 21 |
face | 1.39e-13 | 22 |
sense organ | 1.76e-12 | 24 |
sensory system | 1.76e-12 | 24 |
entire sense organ system | 1.76e-12 | 24 |
ectodermal placode | 9.77e-10 | 31 |
vasculature | 3.29e-08 | 78 |
vascular system | 3.29e-08 | 78 |