FFCP PHASE1:Hg19::chr14:24898394..24898418,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20146 | |||
|TSSclassifier=not | |||
|UniProt=Q6UW01 | |||
|association_with_transcript=312bp_to_ENST00000267406,NM_001039771,uc001wpg.3_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_4_at_CBLN3_5end | |||
|id=chr14:24898394..24898418,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!9.90e-27!12;UBERON:0002028!9.90e-27!12;UBERON:0007277!9.90e-27!12;UBERON:0004732!1.30e-24!13;UBERON:0003076!3.21e-21!15;UBERON:0003057!3.21e-21!15;UBERON:0002680!1.37e-18!9;UBERON:0001895!1.37e-18!9;UBERON:0010092!1.37e-18!9;UBERON:0002298!1.63e-13!8;UBERON:0000955!4.98e-11!69;UBERON:0006238!4.98e-11!69;UBERON:0002037!6.17e-11!6;UBERON:0006215!6.17e-11!6;UBERON:0001017!1.07e-10!82;UBERON:0005743!4.26e-10!86;UBERON:0001896!5.02e-10!3;UBERON:0005290!5.02e-10!3;UBERON:0010096!5.02e-10!3;UBERON:0001049!1.17e-09!57;UBERON:0005068!1.17e-09!57;UBERON:0006241!1.17e-09!57;UBERON:0007135!1.17e-09!57;UBERON:0000988!1.21e-09!3;UBERON:0002616!2.81e-09!59;UBERON:0000073!6.26e-09!94;UBERON:0001016!6.26e-09!94;UBERON:0007023!1.89e-08!115;UBERON:0002022!1.87e-07!1;UBERON:0003075!3.32e-07!86;UBERON:0007284!3.32e-07!86;UBERON:0002346!8.36e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;5.89e-59;12!UBERON:0002028;5.89e-59;12!UBERON:0004732;1.78e-54;13!UBERON:0002680;1.32e-50;9!UBERON:0001895;1.32e-50;9!UBERON:0002037;3.16e-43;6!UBERON:0002298;9.49e-20;6!UBERON:0002360;2.37e-15;2!UBERON:0000094;2.37e-15;2!UBERON:0010743;2.37e-15;2!UBERON:0001896;8.99e-11;3!UBERON:0005290;8.99e-11;3!UBERON:0000988;1.09e-10;3!UBERON:0000073;5.53e-10;53!UBERON:0002616;5.53e-10;53!UBERON:0001016;1.56e-08;83!UBERON:0001017;1.64e-07;75!UBERON:0000955;9.84e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,5.89e-59,12;UBERON:0002028,5.89e-59,12;UBERON:0007277,5.89e-59,12;UBERON:0004732,1.78e-54,13;UBERON:0002680,1.32e-50,9;UBERON:0001895,1.32e-50,9;UBERON:0010092,1.32e-50,9;UBERON:0003076,2.66e-47,15;UBERON:0003057,2.66e-47,15;UBERON:0002037,3.16e-43,6;UBERON:0006215,3.16e-43,6;UBERON:0002298,9.49e-20,6;UBERON:0002360,2.05e-15,2;UBERON:0000094,2.05e-15,2;UBERON:0010743,2.05e-15,2;UBERON:0000073,1.72e-13,53;UBERON:0002616,1.72e-13,53;UBERON:0001049,8.43e-13,56;UBERON:0005068,8.43e-13,56;UBERON:0006241,8.43e-13,56;UBERON:0007135,8.43e-13,56;UBERON:0001017,1.51e-12,81;UBERON:0001016,2.42e-11,89;UBERON:0001896,8.99e-11,3;UBERON:0005290,8.99e-11,3;UBERON:0010096,8.99e-11,3;UBERON:0000988,1.09e-10,3;UBERON:0000955,1.74e-10,68;UBERON:0006238,1.74e-10,68;UBERON:0007023,3.44e-09,114;UBERON:0003075,6.90e-09,82;UBERON:0007284,6.90e-09,82;UBERON:0002346,1.72e-08,86;UBERON:0010371,4.48e-07,104 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,47.3003382582958,42.9047528533152,86.5954523533894,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10765197920019,0.496771223531068,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4953341254903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@CBLN3 | |||
}} |
Revision as of 19:30, 11 January 2014
Short description: | p4@CBLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CBLN3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 312bp_to_ENST00000267406, NM_001039771, uc001wpg.3_5end |
EntrezGene: | CBLN3 |
HGNC: | 20146 |
UniProt: | Q6UW01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 5.89e-59 | 12 |
hindbrain | 5.89e-59 | 12 |
presumptive hindbrain | 5.89e-59 | 12 |
segmental subdivision of nervous system | 1.78e-54 | 13 |
regional part of metencephalon | 1.32e-50 | 9 |
metencephalon | 1.32e-50 | 9 |
future metencephalon | 1.32e-50 | 9 |
posterior neural tube | 2.66e-47 | 15 |
chordal neural plate | 2.66e-47 | 15 |
cerebellum | 3.16e-43 | 6 |
rhombic lip | 3.16e-43 | 6 |
brainstem | 9.49e-20 | 6 |
meninx | 2.05e-15 | 2 |
membrane organ | 2.05e-15 | 2 |
meningeal cluster | 2.05e-15 | 2 |
regional part of nervous system | 1.72e-13 | 53 |
regional part of brain | 1.72e-13 | 53 |
neural tube | 8.43e-13 | 56 |
neural rod | 8.43e-13 | 56 |
future spinal cord | 8.43e-13 | 56 |
neural keel | 8.43e-13 | 56 |
central nervous system | 1.51e-12 | 81 |
nervous system | 2.42e-11 | 89 |
medulla oblongata | 8.99e-11 | 3 |
myelencephalon | 8.99e-11 | 3 |
future myelencephalon | 8.99e-11 | 3 |
pons | 1.09e-10 | 3 |
brain | 1.74e-10 | 68 |
future brain | 1.74e-10 | 68 |
adult organism | 3.44e-09 | 114 |
neural plate | 6.90e-09 | 82 |
presumptive neural plate | 6.90e-09 | 82 |
neurectoderm | 1.72e-08 | 86 |
ecto-epithelium | 4.48e-07 | 104 |