FFCP PHASE1:Hg19::chr14:23288956..23289020,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11065 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UM01 | |||
|association_with_transcript=0bp_to_ENST00000285850,ENST00000397529,ENST00000555702,NM_001126106,uc001wgu.3,uc001wgv.3_5end | |||
|description=CAGE_peak_3_at_SLC7A7_5end | |||
|id=chr14:23288956..23289020,- | |||
|ontology_enrichment_celltype=CL:0002057!7.09e-22!42;CL:0000766!1.70e-19!76;CL:0002194!5.55e-19!63;CL:0000576!5.55e-19!63;CL:0000040!5.55e-19!63;CL:0000559!5.55e-19!63;CL:0000115!6.85e-19!35;CL:0000860!1.48e-18!45;CL:0002009!3.44e-18!65;CL:0000557!1.44e-15!71;CL:0000839!1.56e-15!70;CL:0002139!1.90e-15!24;CL:0002078!4.47e-15!44;CL:0000071!6.54e-13!18;CL:0002546!6.54e-13!18;CL:0000222!4.95e-08!119;CL:0000048!8.26e-08!430;CL:1000413!1.34e-07!9;CL:0000213!3.06e-07!57;CL:0000215!3.06e-07!57;CL:0000763!3.38e-07!112;CL:0000049!3.38e-07!112;CL:0000723!8.93e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.80e-19;36!CL:0002139;4.10e-18;24!CL:0000860;4.85e-18;33!CL:0002057;4.85e-18;33!CL:0000473;5.50e-18;39!CL:0000234;5.50e-18;39!CL:0000576;1.05e-16;48!CL:0000071;4.47e-15;18!CL:0002078;2.28e-12;45!CL:0000766;3.82e-12;69!CL:1000413;9.40e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.76e-29,48;CL:0000234,3.76e-29,48;CL:0000860,1.13e-25,42;CL:0002057,1.13e-25,42;CL:0002194,1.32e-24,59;CL:0000576,1.32e-24,59;CL:0000040,1.32e-24,59;CL:0000559,1.32e-24,59;CL:0000766,6.54e-24,72;CL:0002009,9.05e-24,61;CL:0000115,8.55e-23,36;CL:0000557,1.66e-19,67;CL:0000839,1.77e-19,66;CL:0002139,4.90e-18,24;CL:0002078,9.13e-18,45;CL:0000071,5.03e-15,18;CL:0002546,5.03e-15,18;CL:0000763,5.31e-11,108;CL:0000049,5.31e-11,108;CL:0000213,5.90e-10,58;CL:0000215,5.90e-10,58;CL:1000413,1.00e-08,9;CL:0000738,9.57e-08,136;CL:0002393,2.54e-07,9;CL:0002397,2.54e-07,9;CL:0000222,4.33e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-18;42!CL:0002546;4.47e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.73e-35!216;UBERON:0004535!2.73e-22!110;UBERON:0001009!5.45e-22!113;UBERON:0000055!3.50e-20!69;UBERON:0004872!2.50e-19!84;UBERON:0002193!5.33e-18!112;UBERON:0001981!1.87e-17!60;UBERON:0007500!1.87e-17!60;UBERON:0004537!1.87e-17!60;UBERON:0006965!1.87e-17!60;UBERON:0002049!7.24e-17!79;UBERON:0007798!7.24e-17!79;UBERON:0000926!8.97e-17!448;UBERON:0004120!8.97e-17!448;UBERON:0006603!8.97e-17!448;UBERON:0003914!9.05e-16!118;UBERON:0002405!1.19e-15!115;UBERON:0002390!3.66e-15!102;UBERON:0003061!3.66e-15!102;UBERON:0002371!1.53e-13!80;UBERON:0002204!2.97e-13!167;UBERON:0001986!6.54e-13!18;UBERON:0004638!6.54e-13!18;UBERON:0004852!6.54e-13!18;UBERON:0000468!1.05e-12!659;UBERON:0000480!3.74e-12!626;UBERON:0000467!9.25e-12!625;UBERON:0001474!1.66e-11!86;UBERON:0004765!7.05e-11!101;UBERON:0001434!7.05e-11!101;UBERON:0001637!8.09e-11!42;UBERON:0003509!8.09e-11!42;UBERON:0004572!8.09e-11!42;UBERON:0007023!1.66e-10!115;UBERON:0004111!3.54e-10!241;UBERON:0000025!4.29e-10!194;UBERON:0006914!1.95e-09!25;UBERON:0000487!2.41e-09!22;UBERON:0000477!6.26e-09!286;UBERON:0000922!9.73e-09!612;UBERON:0002050!1.63e-08!605;UBERON:0005423!1.63e-08!605;UBERON:0004573!2.69e-08!33;UBERON:0004571!2.69e-08!33;UBERON:0000923!2.77e-08!604;UBERON:0005291!2.77e-08!604;UBERON:0006598!2.77e-08!604;UBERON:0002532!2.77e-08!604;UBERON:0003915!1.34e-07!9;UBERON:0004700!1.34e-07!9;UBERON:0001917!1.34e-07!9;UBERON:0000479!2.03e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.47e-15;18!UBERON:0001986;4.47e-15;18!UBERON:0004852;4.47e-15;18!UBERON:0000487;1.20e-10;22!UBERON:0000055;1.21e-10;65!UBERON:0006914;1.83e-10;25!UBERON:0007500;3.89e-10;56!UBERON:0001981;3.89e-10;56!UBERON:0004537;3.89e-10;56!UBERON:0001637;9.92e-10;42!UBERON:0003509;9.92e-10;42!UBERON:0004572;9.92e-10;42!UBERON:0003915;9.40e-09;9!UBERON:0004700;9.40e-09;9!UBERON:0001917;9.40e-09;9!UBERON:0004535;2.60e-08;109!UBERON:0004573;4.78e-08;33!UBERON:0004571;4.78e-08;33!UBERON:0001009;2.85e-07;112!UBERON:0002049;6.60e-07;75!UBERON:0007798;6.60e-07;75!UBERON:0000947;6.88e-07;21!UBERON:0010191;6.88e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.57e-41,203;UBERON:0000926,7.20e-27,315;UBERON:0004120,7.20e-27,315;UBERON:0006603,7.20e-27,315;UBERON:0004535,5.43e-24,109;UBERON:0001009,5.94e-23,112;UBERON:0002193,3.08e-22,108;UBERON:0000055,1.20e-21,68;UBERON:0004872,3.97e-20,83;UBERON:0002405,4.26e-19,93;UBERON:0002390,1.28e-18,98;UBERON:0003061,1.28e-18,98;UBERON:0007500,3.20e-18,59;UBERON:0001981,3.20e-18,59;UBERON:0004537,3.20e-18,59;UBERON:0006965,3.20e-18,59;UBERON:0002049,2.64e-17,78;UBERON:0007798,2.64e-17,78;UBERON:0002371,1.05e-15,76;UBERON:0004638,5.03e-15,18;UBERON:0001986,5.03e-15,18;UBERON:0004852,5.03e-15,18;UBERON:0003914,2.14e-14,117;UBERON:0001474,9.77e-14,82;UBERON:0004765,2.07e-12,90;UBERON:0001434,2.13e-12,100;UBERON:0000923,1.25e-11,560;UBERON:0010316,1.25e-11,560;UBERON:0005291,1.25e-11,560;UBERON:0006598,1.25e-11,560;UBERON:0010317,1.25e-11,560;UBERON:0002532,1.25e-11,560;UBERON:0002050,1.85e-11,564;UBERON:0002204,2.60e-11,167;UBERON:0001637,3.21e-11,42;UBERON:0003509,3.21e-11,42;UBERON:0004572,3.21e-11,42;UBERON:0000487,1.30e-10,22;UBERON:0006914,1.91e-10,25;UBERON:0005423,3.10e-10,581;UBERON:0000922,1.76e-09,592;UBERON:0000479,5.05e-09,773;UBERON:0004111,9.17e-09,240;UBERON:0003915,1.00e-08,9;UBERON:0004700,1.00e-08,9;UBERON:0001917,1.00e-08,9;UBERON:0004573,1.21e-08,33;UBERON:0004571,1.21e-08,33;UBERON:0007023,2.02e-08,114;UBERON:0000025,1.01e-07,192;UBERON:0000947,6.34e-07,21;UBERON:0010191,6.34e-07,21 | |||
|phase1_expression=6.7221000330106,2.99740733447376,6.62485699251064,5.00366491765652,9.38618298297304,2.61701557230111,0,0,0.522371256399677,0.245733936501509,0,0,0,1.36142988256051,1.32558950291166,0.672325146451775,3.01347264011988,2.92124036154949,3.41552959153355,0,0,0,0,0,0,1.14620108621927,0.903106483949403,0.865818594450472,2.75354993794233,1.15148819429164,5.26374819274658,0,0,0,0.232401601740905,0,0.880801318004542,6.09394949385065,3.81034450193269,6.07630438004385,24.8546176406316,22.3486629553096,21.6363476812717,11.6318591023652,11.3362783106643,12.8569552429543,6.74044207026485,6.57868620834921,4.64559556342655,4.89077066947656,5.63553554364021,4.96612682766029,6.20542225325913,9.68227025375739,4.06279459783025,5.64727018627814,7.36846605156184,5.8428105955722,6.42776173978895,6.41858054152187,1.27867425159808,5.60747210317417,6.38283704389222,9.37694451171927,13.930043454172,15.8867862913519,15.5705562248894,2.51248665256743,5.73631210262222,2.6062661364614,12.7133895553007,13.2579948955523,12.6584954976354,22.6043156353778,13.8192794977278,20.3368886143125,17.4109378277067,15.3180430698336,13.0187725224635,10.5454715184262,9.74691718275542,14.2478039936414,1.75996244461323,1.09227722252426,0.889509253863555,0.853460445133014,0.400395987036012,2.29900975981793,1.32208974556972,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.255973222308837,0,0.947109008176067,0.821127996921047,0,0,0,7.31420598941885,2.01210257911091,3.83587685530591,0.722878304769133,3.50936537445123,2.60723734129483,0,0.973269740605272,0,0,0,3.47094550068939,0,0,1.29818957461873,1.21890816109487,0.531831842075461,0.476981248610684,1.14398982156026,0.371457501329565,22.6589144398044,17.2046919021225,25.3412566173544,8.47961912886015,45.7254385468797,46.7700671298115,15.465627523724,6.97725249757188,14.5864167701551,14.3929863488808,13.696196781711,9.88353737434066,14.1555993377938,19.8538063386769,34.8361037589157,20.8961364184747,9.43023365029913,5.0675166217495,10.7321646226118,24.6809071487714,17.9537709051799,2.63560834872127,7.75560528296651,0,1.49091585508596,7.09130865321647,2.64818361626438,2.86836620748814,1.06400514659507,1.68203280042692,13.8773694448616,2.22000793575444,2.8008993185979,5.79255889899659,6.21155231831143,2.4217188423189,1.15235184896,0.70296429550139,1.24864030732128,5.13424639390004,1.49448680551801,0,0,0,0.61246251376468,0.368502951935304,1.54988671763648,7.12801714369232,6.67620709052104,0,3.59309070908119,0.505008341862199,0.250237039743928,0.277064115484183,1.75591048352335,2.45190236639216,4.95785594391769,7.48652408856139,0.538168907066586,4.48470516518992,1.48352330811693,1.20036438433761,0.92747276314595,0.772921620136887,1.48893485065272,0.168776332241266,0.584622030967192,0.504867548488229,3.22174645248048,2.58633690910099,1.42003837006646,0.503760491138201,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0.504641701751257,0,1.56449532329816,0.643240938192885,1.38134921352481,4.17931135228781,2.16563844500876,0,0,0,0,0,0,0,0,0,60.5287472792212,9.81692416624121,1.6462960453256,7.3504355692771,0,0.982827216677626,1.77236972004421,0,4.91953754172454,0.343135620597051,0,0,0,0,0.977424915930974,0,0,0,0.117408694235822,5.4859250149208,3.24089858803628,3.23432058798817,0,0,13.2957183287195,2.80805118167085,8.47197625045751,0,0,0,0,0,0,0,0.352193736052904,0.207328115540772,0.432359860250884,0.50496973370552,0.063497894292169,0.381988425558278,0,1.71072446022705,0.205654985406647,0.901029173531752,0.571652865261156,0.560655421726804,0.87192013766656,0.51336800074665,3.10252117818667,14.3062578340753,1.690605505112,3.19125739901845,2.08014873822732,0.514414748524284,0,0,2.14466990487221,3.7983512377401,0.823240336780769,2.28015329005615,1.77695974371273,0.791951872933429,0,0,0.099972991182057,12.162378064119,13.0586843772353,4.21667878966063,2.63587341040741,4.59447743336456,0,0.579125226670317,0,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,8.98808428736619,2.99161459204025,8.70272578215674,1.71768088406796,1.00034104211935,0.542530047399471,1.24782516918484,0.356857977594324,1.41932173530541,0.585707074963566,3.00946099727719,4.5481500811197,2.0694614258501,0,0.184369168541703,2.60650843404249,2.54541504701563,1.37257369524342,2.27444828735176,3.66714141391649,4.37582986994122,0.606255142892519,0,0.604780586659361,4.21783273291921,1.07423381301644,0.841980283299221,4.86928767171664,3.07024349440022,1.12597744800525,2.96836132889982,0,0.532685175939381,0.492762936082855,1.03850885836724,0.116210378459959,2.29632954224082,0,0,0.574072240823034,1.0925470080403,1.04899531967539,0.451199612907412,0.539107359730903,0,0,0.211103257785751,29.5706798584331,15.4785271801629,14.8981982110476,57.0640834954071,0,0.501689773854853,0.764628819135115,1.66215201785745,0.447749509444357,0,0,0,0.656029291399411,0,4.3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| |||
|short_description=p3@SLC7A7 | |||
}} |
Revision as of 19:10, 11 January 2014
Short description: | p3@SLC7A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC7A7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000285850, ENST00000397529, ENST00000555702, NM_001126106, uc001wgu.3, uc001wgv.3_5end |
EntrezGene: | SLC7A7 |
HGNC: | 11065 |
UniProt: | Q9UM01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.76e-29 | 48 |
phagocyte | 3.76e-29 | 48 |
classical monocyte | 1.13e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-25 | 42 |
monopoietic cell | 1.32e-24 | 59 |
monocyte | 1.32e-24 | 59 |
monoblast | 1.32e-24 | 59 |
promonocyte | 1.32e-24 | 59 |
myeloid leukocyte | 6.54e-24 | 72 |
macrophage dendritic cell progenitor | 9.05e-24 | 61 |
endothelial cell | 8.55e-23 | 36 |
granulocyte monocyte progenitor cell | 1.66e-19 | 67 |
myeloid lineage restricted progenitor cell | 1.77e-19 | 66 |
endothelial cell of vascular tree | 4.90e-18 | 24 |
meso-epithelial cell | 9.13e-18 | 45 |
blood vessel endothelial cell | 5.03e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.03e-15 | 18 |
myeloid cell | 5.31e-11 | 108 |
common myeloid progenitor | 5.31e-11 | 108 |
lining cell | 5.90e-10 | 58 |
barrier cell | 5.90e-10 | 58 |
endothelial cell of artery | 1.00e-08 | 9 |
leukocyte | 9.57e-08 | 136 |
intermediate monocyte | 2.54e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.54e-07 | 9 |
mesodermal cell | 4.33e-07 | 121 |