FFCP PHASE1:Hg19::chr14:106552655..106552665,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-61bp_to_Z14176_5end | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_1_at_Z14176_5end | |||
|id=chr14:106552655..106552665,- | |||
|ontology_enrichment_celltype=CL:0000945!3.99e-29!24;CL:0000826!3.99e-29!24;CL:0000236!6.11e-20!14;CL:0000838!5.43e-13!52;CL:0000542!9.93e-13!53;CL:0000051!9.93e-13!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.13e-27;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.34e-27,24;CL:0000826,6.34e-27,24;CL:0000838,7.48e-13,52;CL:0000542,1.27e-12,53;CL:0000051,1.27e-12,53 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.54e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!7.27e-16!3;UBERON:0004854!7.27e-16!3;UBERON:0009034!7.27e-16!3;UBERON:0002095!7.27e-16!3;UBERON:0004782!7.27e-16!3;UBERON:0003281!7.27e-16!3;UBERON:0009664!7.27e-16!3;UBERON:0002296!7.27e-16!3;UBERON:0005602!7.27e-16!3;UBERON:0001179!7.27e-16!3;UBERON:0006293!7.27e-16!3;UBERON:0002372!2.75e-12!1;UBERON:0001961!2.75e-12!1;UBERON:0001744!2.75e-12!1;UBERON:0001735!2.75e-12!1;UBERON:0002363!3.45e-12!1;UBERON:0007647!3.45e-12!1;UBERON:0010115!3.45e-12!1;UBERON:0004177!2.60e-07!7;UBERON:0003127!7.61e-07!2;UBERON:0000341!8.52e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.50e-14;3!UBERON:0004177;2.86e-09;5!UBERON:0005057;2.86e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.40e-14,3;UBERON:0004854,1.40e-14,3;UBERON:0009034,1.40e-14,3;UBERON:0002095,1.40e-14,3;UBERON:0004782,1.40e-14,3;UBERON:0003281,1.40e-14,3;UBERON:0009664,1.40e-14,3;UBERON:0002296,1.40e-14,3;UBERON:0005602,1.40e-14,3;UBERON:0001179,1.40e-14,3;UBERON:0006293,1.40e-14,3;UBERON:0004177,5.38e-07,7;UBERON:0005057,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,3.28402357799783,4.25038219093868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,1.32208974556972,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28943712929488,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.202056159043763,0.358611026963382,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Z14176 | |||
}} |
Revision as of 22:23, 11 January 2014
Short description: | p1@Z14176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Z14176_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -61bp_to_Z14176_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.34e-27 | 24 |
pro-B cell | 6.34e-27 | 24 |
lymphoid lineage restricted progenitor cell | 7.48e-13 | 52 |
lymphocyte | 1.27e-12 | 53 |
common lymphoid progenitor | 1.27e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.40e-14 | 3 |
gastrointestinal system mesentery | 1.40e-14 | 3 |
stomach region | 1.40e-14 | 3 |
mesentery | 1.40e-14 | 3 |
gastrointestinal system serosa | 1.40e-14 | 3 |
mesentery of stomach | 1.40e-14 | 3 |
gut mesentery | 1.40e-14 | 3 |
dorsal mesentery | 1.40e-14 | 3 |
dorsal mesogastrium | 1.40e-14 | 3 |
peritoneal cavity | 1.40e-14 | 3 |
spleen primordium | 1.40e-14 | 3 |
hemopoietic organ | 5.38e-07 | 7 |
immune organ | 5.38e-07 | 7 |