FFCP PHASE1:Hg19::chr13:72166623..72166627,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1187 | |||
|description=CAGE_peak_at_chr13:72166623..72166627,- | |||
|id=chr13:72166623..72166627,- | |||
|ontology_enrichment_celltype=CL:0002618!9.97e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.54e-29;2!CL:0000242;4.54e-29;2!CL:0000312;2.99e-12;5!CL:0000240;2.29e-10;6!CL:0000311;2.29e-10;6!CL:0000079;2.29e-10;6!CL:0000237;2.29e-10;6!CL:0002319;1.21e-08;25!CL:0002535;1.44e-08;2!CL:0000047;2.23e-08;2!CL:0000095;2.86e-07;17!CL:0000362;3.34e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.94e-29,2;CL:0000312,2.82e-12,5;CL:0000240,2.19e-10,6;CL:0000311,2.19e-10,6;CL:0000079,2.19e-10,6;CL:0000237,2.19e-10,6;CL:0000036,2.19e-10,6;CL:0000357,2.19e-10,6;CL:0000114,2.19e-10,6;CL:0002319,1.12e-08,25;CL:0002535,1.50e-08,2;CL:0000095,2.54e-07,17;CL:0000123,2.54e-07,17;CL:0000362,3.24e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.29e-10;6!CL:0000114;2.29e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;7.48e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.26e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003056!5.28e-09!61;UBERON:0003075!2.96e-08!86;UBERON:0007284!2.96e-08!86;UBERON:0002346!1.35e-07!90;UBERON:0000073!1.92e-07!94;UBERON:0001016!1.92e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.44e-08;2!UBERON:0004801;1.44e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.50e-08,2;UBERON:0004801,1.50e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,1.43094374583205,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.535798369704479,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,1.27753871307098,0,0.307240764308458,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,10.3451449982717,0,0,3.27512572210559,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.699679999969566,0,0,0,0,1.37897349296586,0,0.694499979733169,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0.227884111694002,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0.432777279484182,0,0.353830258013357,0,0.296521128680622,0,0,0,0,0.468528891450678,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,3.6651710773093,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0,0.553394539744923,0,0,0,0,1.40500471742064,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.895260599125562,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0.560544326627578,0,0,0,0.357382720883282,1.58013611732727,1.51113852978563,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,5.37167092935694,0,0.22589216407792,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0.946629373159108,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0.20686599172379,0,0.476128862927481,0.0645889098360061,0.31037357147929,0,0,0,0,1.02669990325584,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p@chr13:72166623..72166627,- | |||
}} |
Revision as of 18:00, 11 January 2014
Short description: | p@chr13:72166623..72166627, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:72166623..72166627, - |
Coexpression cluster: | C1187_anaplastic_gastric_small_carcinoid_acute_retinoblastoma_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.94e-29 | 2 |
keratinocyte | 2.82e-12 | 5 |
stratified squamous epithelial cell | 2.19e-10 | 6 |
keratin accumulating cell | 2.19e-10 | 6 |
stratified epithelial cell | 2.19e-10 | 6 |
keratinizing barrier epithelial cell | 2.19e-10 | 6 |
epithelial fate stem cell | 2.19e-10 | 6 |
stratified epithelial stem cell | 2.19e-10 | 6 |
surface ectodermal cell | 2.19e-10 | 6 |
neural cell | 1.12e-08 | 25 |
epithelial cell of cervix | 1.50e-08 | 2 |
neuron associated cell | 2.54e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.54e-07 | 17 |
epidermal cell | 3.24e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.50e-08 | 2 |
cervix epithelium | 1.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.26e-10 | 14 |